Gchil876.t1 (mRNA) Gracilaria chilensis NLEC103_M9 male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NameGchil876.t1
Unique NameGchil876.t1
TypemRNA
OrganismGracilaria chilensis NLEC103_M9 male (Gracilaria chilensis NLEC103_M9 male)
Sequence length480
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000017_piloncontigtig00000017_pilon:741436..742875 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gracilaria chilensis NLEC103_M9 male OGS1.02022-05-09
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesTypePosition
Gchil876Gchil876Gracilaria chilensis NLEC103_M9 malegenetig00000017_pilon 741436..742875 -


The following stop_codon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Gchil876.t1.stop1Gchil876.t1.stop1Gracilaria chilensis NLEC103_M9 malestop_codontig00000017_pilon 741436..741438 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Gchil876.t1.CDS1Gchil876.t1.CDS1Gracilaria chilensis NLEC103_M9 maleCDStig00000017_pilon 741436..742875 -


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Gchil876.t1.exon1Gchil876.t1.exon1Gracilaria chilensis NLEC103_M9 maleexontig00000017_pilon 741436..742875 -


The following start_codon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Gchil876.t1.start1Gchil876.t1.start1Gracilaria chilensis NLEC103_M9 malestart_codontig00000017_pilon 742873..742875 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
Gchil876.t1Gchil876.t1Gracilaria chilensis NLEC103_M9 malepolypeptidetig00000017_pilon 741436..742875 -


Sequences
The following sequences are available for this feature:

mRNA sequence

>Gchil876.t1 ID=Gchil876.t1|Name=Gchil876.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=mRNA|length=480bp
MYGLAESAFPSQPMSSSEESSMPAVTRQPASPPPSPLPAVNENSSLPSTP
QSLFEEQEEQSPATVLDRRQLGALHLLPATAEEFFDIDRFKYGEYDLVDG
LLNWRGMSERDRNKEQAKNLLYRFKEVELNNPTSNRVATLEATIAIPTQR
HLRSRQPSSSNASPQSGASEETATPARGHPRYSVVRADLAIGERLSDEAR
KRLSPTSQVITFPVGHKPQVVVENTSSDERRDMEEKRELYEQKEIDKYIV
IRNRARAKNPHPAVHEGNLRNGKYRGMEKPLRGDDEVDLGPIGVLKAKDC
INPGKPDQWHHREGRQERMRREEAEKEKREEKERRQAAEKREREEKERRQ
AAEKREREEKERRQAAEKEKREEKERRQAAEKEKREEKERRQAAEKEKRE
EKERRQAAEKREREEKERRQKAEARIREQRRQMREAGLPVGESSSSSRGS
PSSNNSRFSSSPGSRSSLSPKSPARKKRK*
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spliced messenger RNA

>Gchil876.t1 ID=Gchil876.t1|Name=Gchil876.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=mRNA|length=1440bp|location=Sequence derived from alignment at tig00000017_pilon:741436..742875- (Gracilaria chilensis NLEC103_M9 male)|Notes=Excludes all bases but those of type(s): exon.  
ATGTACGGTCTTGCGGAGTCTGCTTTTCCCTCGCAACCGATGTCGTCTTC
AGAAGAAAGTTCGATGCCTGCGGTAACACGGCAACCAGCATCACCCCCAC
CCTCTCCATTGCCTGCAGTAAATGAGAACTCGTCTCTGCCGAGCACTCCG
CAGTCGCTCTTTGAAGAACAGGAAGAACAGTCTCCCGCAACAGTACTAGA
TCGTCGACAACTGGGAGCCCTACATCTTCTACCAGCCACAGCGGAGGAGT
TCTTTGACATTGACCGGTTTAAATACGGTGAGTACGACTTGGTGGACGGC
CTTCTGAACTGGCGCGGTATGTCGGAGCGCGACAGGAACAAGGAACAGGC
AAAGAACCTTTTGTATCGTTTCAAAGAAGTAGAACTGAACAACCCTACTA
GTAACCGTGTCGCGACCTTAGAAGCTACCATCGCGATTCCAACCCAACGG
CACCTCAGGTCCCGTCAGCCATCATCTAGTAATGCTTCGCCTCAAAGCGG
GGCTTCTGAGGAAACTGCAACCCCTGCCCGTGGACATCCAAGGTACTCCG
TGGTACGGGCCGACCTTGCAATTGGCGAACGTCTCTCAGACGAAGCCCGT
AAGCGTTTATCACCCACTAGCCAGGTGATAACGTTTCCTGTTGGTCATAA
GCCACAAGTTGTAGTGGAAAACACGAGCTCGGATGAACGCAGAGATATGG
AAGAAAAACGAGAACTTTATGAACAAAAAGAAATTGACAAGTACATTGTG
ATAAGAAACCGGGCTCGCGCCAAGAACCCTCACCCAGCTGTACACGAGGG
AAATCTTCGCAATGGGAAGTATAGGGGGATGGAGAAACCTCTTCGAGGCG
ATGACGAAGTTGATCTTGGGCCCATTGGAGTACTTAAGGCAAAGGATTGC
ATCAACCCTGGCAAACCGGATCAATGGCATCACAGGGAAGGCAGGCAGGA
ACGCATGAGACGAGAGGAAGCGGAAAAGGAAAAGCGGGAGGAGAAGGAGA
GGAGACAAGCGGCGGAAAAGAGAGAGCGGGAAGAGAAGGAGAGGAGACAA
GCGGCGGAAAAGAGAGAGCGGGAAGAGAAGGAGAGGAGACAAGCGGCGGA
AAAGGAAAAGCGGGAAGAGAAGGAGAGGAGACAAGCGGCGGAAAAGGAAA
AGCGGGAAGAGAAGGAGAGGAGACAAGCGGCGGAAAAGGAAAAGCGGGAA
GAGAAGGAGAGGAGACAAGCGGCGGAAAAGAGAGAGCGGGAAGAGAAGGA
GAGGAGACAAAAAGCAGAAGCTCGGATAAGGGAGCAACGCAGGCAGATGA
GAGAAGCAGGCCTTCCGGTTGGCGAAAGCAGCTCAAGCTCGAGGGGCAGC
CCGAGCTCAAACAACAGCCGTTTTTCGAGCAGTCCGGGCTCAAGAAGCAG
CTTGTCTCCGAAGAGTCCAGCTCGAAAGAAGCGCAAGTGA
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protein sequence of Gchil876.t1

>Gchil876.t1 ID=Gchil876.t1|Name=Gchil876.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=polypeptide|length=480bp
MYGLAESAFPSQPMSSSEESSMPAVTRQPASPPPSPLPAVNENSSLPSTP
QSLFEEQEEQSPATVLDRRQLGALHLLPATAEEFFDIDRFKYGEYDLVDG
LLNWRGMSERDRNKEQAKNLLYRFKEVELNNPTSNRVATLEATIAIPTQR
HLRSRQPSSSNASPQSGASEETATPARGHPRYSVVRADLAIGERLSDEAR
KRLSPTSQVITFPVGHKPQVVVENTSSDERRDMEEKRELYEQKEIDKYIV
IRNRARAKNPHPAVHEGNLRNGKYRGMEKPLRGDDEVDLGPIGVLKAKDC
INPGKPDQWHHREGRQERMRREEAEKEKREEKERRQAAEKREREEKERRQ
AAEKREREEKERRQAAEKEKREEKERRQAAEKEKREEKERRQAAEKEKRE
EKERRQAAEKREREEKERRQKAEARIREQRRQMREAGLPVGESSSSSRGS
PSSNNSRFSSSPGSRSSLSPKSPARKKRK*
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mRNA from alignment at tig00000017_pilon:741436..742875-

Legend: polypeptideCDSexonstart_codonstop_codon
Hold the cursor over a type above to highlight its positions in the sequence below.
>Gchil876.t1 ID=Gchil876.t1|Name=Gchil876.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=mRNA|length=1440bp|location=Sequence derived from alignment at tig00000017_pilon:741436..742875- (Gracilaria chilensis NLEC103_M9 male)
ATGTACGGTCTTGCGGAGTCTGCTTTTCCCTCGCAACCGATGTCGTCTTC
AGAAGAAAGTTCGATGCCTGCGGTAACACGGCAACCAGCATCACCCCCAC
CCTCTCCATTGCCTGCAGTAAATGAGAACTCGTCTCTGCCGAGCACTCCG
CAGTCGCTCTTTGAAGAACAGGAAGAACAGTCTCCCGCAACAGTACTAGA
TCGTCGACAACTGGGAGCCCTACATCTTCTACCAGCCACAGCGGAGGAGT
TCTTTGACATTGACCGGTTTAAATACGGTGAGTACGACTTGGTGGACGGC
CTTCTGAACTGGCGCGGTATGTCGGAGCGCGACAGGAACAAGGAACAGGC
AAAGAACCTTTTGTATCGTTTCAAAGAAGTAGAACTGAACAACCCTACTA
GTAACCGTGTCGCGACCTTAGAAGCTACCATCGCGATTCCAACCCAACGG
CACCTCAGGTCCCGTCAGCCATCATCTAGTAATGCTTCGCCTCAAAGCGG
GGCTTCTGAGGAAACTGCAACCCCTGCCCGTGGACATCCAAGGTACTCCG
TGGTACGGGCCGACCTTGCAATTGGCGAACGTCTCTCAGACGAAGCCCGT
AAGCGTTTATCACCCACTAGCCAGGTGATAACGTTTCCTGTTGGTCATAA
GCCACAAGTTGTAGTGGAAAACACGAGCTCGGATGAACGCAGAGATATGG
AAGAAAAACGAGAACTTTATGAACAAAAAGAAATTGACAAGTACATTGTG
ATAAGAAACCGGGCTCGCGCCAAGAACCCTCACCCAGCTGTACACGAGGG
AAATCTTCGCAATGGGAAGTATAGGGGGATGGAGAAACCTCTTCGAGGCG
ATGACGAAGTTGATCTTGGGCCCATTGGAGTACTTAAGGCAAAGGATTGC
ATCAACCCTGGCAAACCGGATCAATGGCATCACAGGGAAGGCAGGCAGGA
ACGCATGAGACGAGAGGAAGCGGAAAAGGAAAAGCGGGAGGAGAAGGAGA
GGAGACAAGCGGCGGAAAAGAGAGAGCGGGAAGAGAAGGAGAGGAGACAA
GCGGCGGAAAAGAGAGAGCGGGAAGAGAAGGAGAGGAGACAAGCGGCGGA
AAAGGAAAAGCGGGAAGAGAAGGAGAGGAGACAAGCGGCGGAAAAGGAAA
AGCGGGAAGAGAAGGAGAGGAGACAAGCGGCGGAAAAGGAAAAGCGGGAA
GAGAAGGAGAGGAGACAAGCGGCGGAAAAGAGAGAGCGGGAAGAGAAGGA
GAGGAGACAAAAAGCAGAAGCTCGGATAAGGGAGCAACGCAGGCAGATGA
GAGAAGCAGGCCTTCCGGTTGGCGAAAGCAGCTCAAGCTCGAGGGGCAGC
CCGAGCTCAAACAACAGCCGTTTTTCGAGCAGTCCGGGCTCAAGAAGCAG
CTTGTCTCCGAAGAGTCCAGCTCGAAAGAAGCGCAAGTGA
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Coding sequence (CDS) from alignment at tig00000017_pilon:741436..742875-

>Gchil876.t1 ID=Gchil876.t1|Name=Gchil876.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=CDS|length=1440bp|location=Sequence derived from alignment at tig00000017_pilon:741436..742875- (Gracilaria chilensis NLEC103_M9 male)
ATGTACGGTCTTGCGGAGTCTGCTTTTCCCTCGCAACCGATGTCGTCTTC
AGAAGAAAGTTCGATGCCTGCGGTAACACGGCAACCAGCATCACCCCCAC
CCTCTCCATTGCCTGCAGTAAATGAGAACTCGTCTCTGCCGAGCACTCCG
CAGTCGCTCTTTGAAGAACAGGAAGAACAGTCTCCCGCAACAGTACTAGA
TCGTCGACAACTGGGAGCCCTACATCTTCTACCAGCCACAGCGGAGGAGT
TCTTTGACATTGACCGGTTTAAATACGGTGAGTACGACTTGGTGGACGGC
CTTCTGAACTGGCGCGGTATGTCGGAGCGCGACAGGAACAAGGAACAGGC
AAAGAACCTTTTGTATCGTTTCAAAGAAGTAGAACTGAACAACCCTACTA
GTAACCGTGTCGCGACCTTAGAAGCTACCATCGCGATTCCAACCCAACGG
CACCTCAGGTCCCGTCAGCCATCATCTAGTAATGCTTCGCCTCAAAGCGG
GGCTTCTGAGGAAACTGCAACCCCTGCCCGTGGACATCCAAGGTACTCCG
TGGTACGGGCCGACCTTGCAATTGGCGAACGTCTCTCAGACGAAGCCCGT
AAGCGTTTATCACCCACTAGCCAGGTGATAACGTTTCCTGTTGGTCATAA
GCCACAAGTTGTAGTGGAAAACACGAGCTCGGATGAACGCAGAGATATGG
AAGAAAAACGAGAACTTTATGAACAAAAAGAAATTGACAAGTACATTGTG
ATAAGAAACCGGGCTCGCGCCAAGAACCCTCACCCAGCTGTACACGAGGG
AAATCTTCGCAATGGGAAGTATAGGGGGATGGAGAAACCTCTTCGAGGCG
ATGACGAAGTTGATCTTGGGCCCATTGGAGTACTTAAGGCAAAGGATTGC
ATCAACCCTGGCAAACCGGATCAATGGCATCACAGGGAAGGCAGGCAGGA
ACGCATGAGACGAGAGGAAGCGGAAAAGGAAAAGCGGGAGGAGAAGGAGA
GGAGACAAGCGGCGGAAAAGAGAGAGCGGGAAGAGAAGGAGAGGAGACAA
GCGGCGGAAAAGAGAGAGCGGGAAGAGAAGGAGAGGAGACAAGCGGCGGA
AAAGGAAAAGCGGGAAGAGAAGGAGAGGAGACAAGCGGCGGAAAAGGAAA
AGCGGGAAGAGAAGGAGAGGAGACAAGCGGCGGAAAAGGAAAAGCGGGAA
GAGAAGGAGAGGAGACAAGCGGCGGAAAAGAGAGAGCGGGAAGAGAAGGA
GAGGAGACAAAAAGCAGAAGCTCGGATAAGGGAGCAACGCAGGCAGATGA
GAGAAGCAGGCCTTCCGGTTGGCGAAAGCAGCTCAAGCTCGAGGGGCAGC
CCGAGCTCAAACAACAGCCGTTTTTCGAGCAGTCCGGGCTCAAGAAGCAG
CTTGTCTCCGAAGAGTCCAGCTCGAAAGAAGCGCAAGTGA
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