Gchil1357.t1 (polypeptide) Gracilaria chilensis NLEC103_M9 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGchil1357.t1
Unique NameGchil1357.t1
Typepolypeptide
OrganismGracilaria chilensis NLEC103_M9 male (Gracilaria chilensis NLEC103_M9 male)
Sequence length246
Homology
BLAST of Gchil1357.t1 vs. uniprot
Match: R7Q637_CHOCR (Uncharacterized protein n=2 Tax=Chondrus crispus TaxID=2769 RepID=R7Q637_CHOCR)

HSP 1 Score: 124 bits (312), Expect = 4.500e-31
Identity = 64/176 (36.36%), Postives = 104/176 (59.09%), Query Frame = 0
Query:   62 QLVSTGLVVSKGSSGVLNFNITLKAVQASTLANTDQAFVQCLTNAERSRYQEMKESYNGNLMVPMMQWLGVNLNGETTLRDMRRARHRQELYGEKSKVVNQVLLEQVTSMVQISGTLMAEGVSIMPTTVFAFIRIARVVLEDGTSMTVLSSNPNDLRAANSCGQMVQSSTVGLDII 237
            ++   GL V++G+ G L F+I +KA+ A TL   D+ F   L+ AE+S Y+  K S+   L +P+ +W+G + + + T          QE Y EK +  +Q+L    ++ ++ISG+L A G+S  PT  FAFI++ARV  EDG+S  ++S+NP D+ A  S G ++ S    +D+I
Sbjct:   80 RITRVGLNVNRGAYGTLYFDIVVKAIDAETLQKNDKEFEATLSAAEKSVYRTRKASWKKGLDIPLFKWIGADFDKKVTTESFTEEAASQENYTEKVRAASQLLENSASTKIRISGSLKATGISFRPTVAFAFIKLARVTFEDGSSQLIVSNNPEDVVAGTSGGDVLPSEDPVVDVI 255          
BLAST of Gchil1357.t1 vs. uniprot
Match: R7Q6J5_CHOCR (Uncharacterized protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7Q6J5_CHOCR)

HSP 1 Score: 89.7 bits (221), Expect = 5.000e-18
Identity = 50/189 (26.46%), Postives = 102/189 (53.97%), Query Frame = 0
Query:   52 PVSTTQVSFEQLVSTGLVVSKGSSGVLNFNITLKAVQASTLANTDQAFVQCLTNAERSRYQEMKESYNGNLMVPMMQWLGVNLNG-ETTLRDMRRARHRQELYGEKSKVVNQVLLEQVTSMVQISGTLMAEGVSIMPTTVFAFIRIARVVLEDGTSMTVLSSNPNDLRAANSCGQMVQSSTVGLDIIDL 239
            P  ++   F +  + G+ V++G++  ++F+ITL  + A  +A  D  +   LT + +  Y   K +Y G L +P M  +G +L   +    ++R++R  ++L+  +   V+++L     + VQI G+    G S++P TV+ ++++ARV   DG ++T++S++P D   + S G +      G+ +  L
Sbjct:   48 PFKSSVSGFIRASTFGVSVTRGATATISFSITLSGISAVEMAKKDAIYQNILTGSLKKTYMRRKNAYKGGLNLPFMADIGADLRRRKLNGGELRKSRVSKQLFERRLCAVSKILGGVRRARVQIRGSRRVTGTSLIPRTVYGYVKVARVTRTDGKTITIVSTDPRDFVVSTSEGIVSARGVEGVQVSQL 236          
BLAST of Gchil1357.t1 vs. uniprot
Match: R7Q4Y7_CHOCR (Uncharacterized protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7Q4Y7_CHOCR)

HSP 1 Score: 63.9 bits (154), Expect = 1.730e-9
Identity = 34/112 (30.36%), Postives = 65/112 (58.04%), Query Frame = 0
Query:  126 MMQWLGVNLNGETTLRDMRRARHRQELYGEKSKVVNQVLLEQVTSMVQISGTLMAEGVSIMPTTVFAFIRIARVVLEDGTSMTVLSSNPNDLRAANSCGQMVQSSTVGLDII 237
            M+++ G ++  + +  ++   R   E + ++ + +  +L     + ++I+GTL A GVS +PT  FAF+R+AR+  EDG++  V+S+   D+ AA+  G  V +S    DI+
Sbjct:    1 MIEFTGADILEDLSKEELVEKRESSEEFRKREQALTSILETVADTRIRINGTLTATGVSQIPTVAFAFVRLARIEFEDGSTQLVVSNKNEDIIAADEDGDAVGTSDQESDIL 112          
The following BLAST results are available for this feature:
BLAST of Gchil1357.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
R7Q637_CHOCR4.500e-3136.36Uncharacterized protein n=2 Tax=Chondrus crispus T... [more]
R7Q6J5_CHOCR5.000e-1826.46Uncharacterized protein n=1 Tax=Chondrus crispus T... [more]
R7Q4Y7_CHOCR1.730e-930.36Uncharacterized protein n=1 Tax=Chondrus crispus T... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..21
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 4..15
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..3
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 22..245
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 16..21

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00004433_piloncontigtig00004433_pilon:923710..924447 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria chilensis NLEC103_M9 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gchil1357.t1Gchil1357.t1Gracilaria chilensis NLEC103_M9 malemRNAtig00004433_pilon 923710..924447 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gchil1357.t1 ID=Gchil1357.t1|Name=Gchil1357.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=polypeptide|length=246bp
MAPLLLIFSFVCFFLQKYCRASILPKTSRHEHLTLLNESERVTINPQNHP
YPVSTTQVSFEQLVSTGLVVSKGSSGVLNFNITLKAVQASTLANTDQAFV
QCLTNAERSRYQEMKESYNGNLMVPMMQWLGVNLNGETTLRDMRRARHRQ
ELYGEKSKVVNQVLLEQVTSMVQISGTLMAEGVSIMPTTVFAFIRIARVV
LEDGTSMTVLSSNPNDLRAANSCGQMVQSSTVGLDIIDLPPSLGI*
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