Gchil4474.t1 (polypeptide) Gracilaria chilensis NLEC103_M9 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGchil4474.t1
Unique NameGchil4474.t1
Typepolypeptide
OrganismGracilaria chilensis NLEC103_M9 male (Gracilaria chilensis NLEC103_M9 male)
Sequence length564
Homology
BLAST of Gchil4474.t1 vs. uniprot
Match: A0A2V3INM3_9FLOR (DNA polymerase iota n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3INM3_9FLOR)

HSP 1 Score: 676 bits (1745), Expect = 1.990e-238
Identity = 351/566 (62.01%), Postives = 423/566 (74.73%), Query Frame = 0
Query:    1 MFSGKKRPRPAATRAIIALDLDCFYASVAIRARPHLKDKPVVIVQKHLCVTSNYVARSRAKGAVQKMTPVSQALQKCPELVCIDGSDLTPFREASLEVITVVRAWLEERATKISSPLNRRSCICPCQRLGFDEVFIDVTGLTQAQIERGGAPFHFKGHVFGLTEDDQVRRTLMVASQIAHELRDHVTQKTELTICAGISNSKLLAKLAVNMNKPNDQSTFLSEHAAEYIATLSPRALMGFGHNTHEKIIKWAEKHAAHTSVDTVAQVLLLFGIEPGGLQNLVEIVGTEKQARYLVDLCRGVDTSEVVDCGNAPKSMSAEDSCRSCDNMEDVNRRLTIQISRLVTRLRDDGMLFLRRPKTLTVSYRFRGDGFTSTSRSVPMPVEIVSVCCSRQNKAIPKAIEGIRRTALAVLKQQAGVCTKNKFDLTLIAVGATNFTSVTTNNGNGFTEDISKFF-AKSTESEVGTHRRVNVLELDSGSASISTRAGQSASQLEGQKSESGGNCELGTVATCPICRKTLPGSNLKQNNHIDNCLR---TGNFRTKSSSKRPRSTSNTRTVDSYFAKR 562
            M   +KR RP  +RAIIA DLDCFYASVAIRARPHLKDKPVVIVQKHLCVTSNYVARSRAKGAVQKMTPVS ALQKCPELVCIDGSDLTPFREASLEV+T +RAWL +RA + ++  N +   C CQRLGFDEVFIDVT L  ++IE GGAPF F+GHVFG T+DD++RR LMVASQ++H+LR+++  KT+LT+CAGIS+SK LAKLAVNMNKPNDQ+ FL + +AEY+ TLSPRAL GFGH TH+KII W + +  H  ++TVA VL LFG    G++ L  I+G E+ A ++++LCRGVD +EV+D G+APKS+SAEDSCRSC  MEDV+RRL +QI+RLV+RLR DG LF RRP+ L+VSYRFRGDGF  TSRSVPMP EIVSVCCS+QNKAIPKAIE I++TAL+VLK+ AGV     FDLTL+AVGA+NF+   +  GNG T DIS+FF  K+   + G  +    L        +S        Q    K  S    E+     CPIC   L G NL QNNHID CL+   T   ++  S KR R +  TRT+DSYF+KR
Sbjct:    1 MSIRRKRQRPVTSRAIIAFDLDCFYASVAIRARPHLKDKPVVIVQKHLCVTSNYVARSRAKGAVQKMTPVSHALQKCPELVCIDGSDLTPFREASLEVVTAIRAWLADRAREAAAMSNTKPPFCACQRLGFDEVFIDVTELALSEIENGGAPFLFRGHVFGRTDDDELRRLLMVASQLSHQLREYLIAKTQLTLCAGISHSKQLAKLAVNMNKPNDQTVFLPDQSAEYLKTLSPRALQGFGHGTHDKIITWTKHNGKHEGIETVADVLQLFGDGQDGIRRLGTILGNEQHALHILNLCRGVDHTEVLDSGDAPKSISAEDSCRSCTTMEDVSRRLVVQITRLVSRLRSDGQLFSRRPRALSVSYRFRGDGFVGTSRSVPMPTEIVSVCCSQQNKAIPKAIESIKKTALSVLKEHAGVQEGRTFDLTLLAVGASNFSDSDSFKGNGLTTDISEFFIGKAKRIDSGKKKSSGTLHHSQTPTGVSNHV-----QRTDSKERSTPEAEV----RCPICNSKLSGDNLMQNNHIDKCLKSSCTKRDKSAGSVKRARKSLGTRTLDSYFSKR 557          
BLAST of Gchil4474.t1 vs. uniprot
Match: R7QGB3_CHOCR (DNA Polymerase Iota n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QGB3_CHOCR)

HSP 1 Score: 505 bits (1301), Expect = 2.090e-171
Identity = 278/564 (49.29%), Postives = 370/564 (65.60%), Query Frame = 0
Query:    1 MFSGKKRPRPAATRAIIALDLDCFYASVAIRARPHLKDKPVVIVQKHLCVTSNYVARSRAKGAVQKMTPVSQALQKCPELVCIDGSDLTPFREASLEVITVVRAWLEERATKISSPLNRRSCICPCQRLGFDEVFIDVTGLTQAQIERGGAPFHFKGHVFGLTEDDQVRRTLMVASQIAHELRDHVTQKTELTICAGISNSKLLAKLAVNMNKPNDQSTFLSEHAAEYIATLSPRALMGFGHNTHEKIIKWAEKHAAHTSVDTVAQVLLLFGIEPGGLQNLVEIVGTEKQARYLVDLCRGVDTSEVVDCGNAPKSMSAEDSCRSCDNMEDVNRRLTIQISRLVTRLRDDGMLFLRRPKTLTVSYRFRGDGFTSTSRSVPMPVEIVSVCCSRQNKAIPKAIEGIRRTALAVLKQQAGVCTKNKFDLTLIAVGATNFTSVTTNNGNGFT--EDISKFFAKSTESEVGTHRRVNVLELDSGSASISTRAGQSASQLEGQKSESGGNCELGTVATCPICRKTLPGSNLKQNNHIDNCLRTGNFRTKSSSKRPRSTSNTRTVDSYFAKR 562
            M + +KRPR + +RAI+ALDLDCFYA VAIR+RPHL ++PVVI+QKHLCVTSNYVAR  A GAVQKMTPVS AL+ CP++VCIDGSDLTPFREA+ EV+ V+RAWL  + T+    L   S   PCQ+LGFDEVFIDV+ L   Q+  GG P+ F+GH+FG T+DD  RR LMVASQ+A ELR  +T +T+LT+CAGIS SKLLAKLAVNMNKPNDQ+ FLS  AA+YIA   PR+L GFG+    KI  WA+++     + T A V+  FG    G  +L +++  + QAR +++LC+G DTS V++ G+APKS+++ DS RSC  +ED  RR+TI+   +VTRLR D  L+ RRPKTLTV +RFRGDG+ +T R++PMP EIVS+C S+   A  ++I  + R AL VLK  AGV   + FD+TLI++GA+ FT   T      T  E ++ FFA      + +  R     L    +S + R   S +                + + CPIC + L     K + H+D CLR        + KR ++ SNT  VD++F ++
Sbjct:    1 MSAARKRPRASQSRAILALDLDCFYAQVAIRSRPHLANRPVVILQKHLCVTSNYVARRLAHGAVQKMTPVSTALKACPDIVCIDGSDLTPFREANAEVLAVIRAWLHAKVTE----LGVGSFPIPCQKLGFDEVFIDVSRLVAEQVTAGGRPWEFQGHIFGRTDDDASRRALMVASQLASELRKEITLRTKLTLCAGISESKLLAKLAVNMNKPNDQTIFLSGDAAQYIAGRHPRSLPGFGYAVEGKISAWAKRNGKE-DIKTAADVVQWFGDGKKGFASLAKVLDNDDQARKILELCQGTDTSPVIESGDAPKSLTSMDSFRSCTKIEDAERRVTIRAKDMVTRLRRDWELYGRRPKTLTVGFRFRGDGYHATMRAIPMPQEIVSLCSSKGADAADRSIIALSRAALFVLKDHAGVSASSTFDMTLISIGASAFTENKTEKNATSTKKETVASFFAPKEGKGMSSVCRPPNGRLLQNRSSPNPRRPLSPNA---------------SFSRCPICNEVLSSLLAKASLHVDQCLRRSET-VSPARKRSKTASNTFRVDTFFQRK 543          
BLAST of Gchil4474.t1 vs. uniprot
Match: A0A7S3ENM2_9RHOD (Hypothetical protein n=1 Tax=Rhodosorus marinus TaxID=101924 RepID=A0A7S3ENM2_9RHOD)

HSP 1 Score: 199 bits (506), Expect = 8.170e-54
Identity = 162/471 (34.39%), Postives = 233/471 (49.47%), Query Frame = 0
Query:   10 PAAT-RAIIALDLDCFYASVAIRARPHLKDKPVVIVQKHLCVTSNYVARSRAKGAVQKMTPVSQALQKCPELVCIDGSDLTPFREASLEVITVVRAWLEERATKISSPLNRRSCICPCQRLGFDEVFIDVTGLTQAQIERGGAPFHFKGHVFGL---------TEDDQVRRTLMVASQIAHELRDHVTQKTELTICAGISNSKLLAKLAVNMNKPNDQSTFLSEHAAEYIATLSPRALMGFGHNTHEKIIKWAEKHAAHT----SVDTVAQVLLLFGIEPGGLQNLVEIVGTEKQARYLVDLCRGVDTSEVVDCGNAPKSMSAEDSCRSCDNMEDVNRRLTIQI-SRLVTRLRDDGMLFL-RRPKTLTVSYRFRGDGFTSTSRSVPMPVEIVSVCCSRQNKAIPKAIEGIRRTALAVLKQQAGVCTKNKFDLTLIAVGATNFTSVTTNNGNGFTEDI--SKFFAKSTESEV 462
            P AT R +IA+DLDCFYA V I A+P L++KPV + Q+H+ VT NY+AR   K   +K+   + A++ CPEL+ I+G DLT +R A+  V   VR             LN R      ++LG DE FID T +    I+     ++F+G V+            ED +  R LMV SQ+A  LR  + + +ELT CAG++++K+LAKLA NMNKPN Q++ +   A  Y++ L  R L G G         W   H         V T   +   +      L  L  ++G+ K+A +L DL RG D +EV +   A K +S EDS +S     +V + LT+++   L  RL+ D  L   RR  TL V   FR       SRS P P                  ++ ++ + + VLK  +G+     F LTL+ VGA NF ++    G G   D    K  AK+ E  +
Sbjct:   42 PVATDRVVIAIDLDCFYAQVEIVAKPELREKPVAVTQQHIIVTCNYIAR---KFGCRKLMSTADAVKSCPELILINGEDLTRYRAANELVHQAVRG---------VCGLNTR-----IEKLGLDEFFIDATHIVNETIKSKSYNYNFEGFVYPAMDQLFEGSNAEDVETERALMVGSQLASRLRAKILEDSELTCCAGVASNKMLAKLAANMNKPNSQTSLMPGVAGSYVSDLPLRKLPGVG---------WKASHEFRQIFGDEVKTAGHLRSAYN-----LPQLENLLGS-KRAAWLWDLARGEDRTEVKNT-IATKIVSVEDSFKSAKTWGEV-QDLTLKLCGELKDRLKIDAELHPGRRASTLRVV--FRKAKRNRESRSTPFP---------------DLEVDALQHSMIHVLKA-SGIA--EPFHLTLLGVGACNFVNLVPQPGTGRLIDFFSRKQLAKAPECPI 458          
BLAST of Gchil4474.t1 vs. uniprot
Match: UPI0018D9001A (DNA polymerase iota-like isoform X1 n=3 Tax=Patiria miniata TaxID=46514 RepID=UPI0018D9001A)

HSP 1 Score: 201 bits (512), Expect = 2.270e-52
Identity = 158/461 (34.27%), Postives = 234/461 (50.76%), Query Frame = 0
Query:   13 TRAIIALDLDCFYASVAIRARPHLKDKPVVIVQKHLCVTSNYVARSRAKGAVQKMTPVSQALQKCPELVCIDGSDLTPFREASLEVITVVRAWLEERATKISSPLNRRSCICPCQRLGFDEVFIDVTGLTQAQIERGGAPFHFKGHVFGLTEDDQV---------------RRTLMVASQIAHELRDHVTQKTELTICAGISNSKLLAKLAVNMNKPNDQSTFLSEHAAEYIATLSP-RALMGFGHNTHEKIIKWAEKHAAHTSVDTVAQVLLLFGIEPGGLQNLVEIVGTEKQARYLVDLCRGVDTSEVVDCGNAPKSMSAEDSCRSCDNMEDVNRRLTIQISRLVTRLRDDGMLFLRRPKTLTVSYR--FRGDGFTSTSRSVPMPVEIVSVCCSRQNKAIPKAIEGIRRTALAVLKQQAGVCTKNKFDLTLIAVGATNFTSVTTNNGNGFTEDISKFFA 455
            TR II +DLDC+YA V +   P L+ KP+ I QK+L VT NYVAR+R    V K+  ++ ALQ+CP+LV ++G DLT +RE S  +  +++ +         SPL         +RLGFDE FIDV+ L   +++R        GHV+G T  + V                + L++AS IAHE+R+ +  +  LT CAG++++KLLAKL  + +KPNDQ+T         +A+L+    + G GH+T +K+          T++D + +  L    E  G Q           A  +  LC+G D S VV  G  P+S+S EDS R C ++++   ++   +  L+ RLR DG    R+P TL +S R   R   +T  SR   MP  I+    S ++    K ++      L V      V T   F LTLI+V    F S +       T DI+KFF+
Sbjct:   81 TRTIIHIDLDCYYAQVEMVRNPALRTKPLGIQQKYLLVTCNYVARARG---VTKLMRITDALQRCPDLVIVNGEDLTHYREMSYRITELLQQF---------SPL--------VERLGFDENFIDVSHLVSQRLQREEGRTEVFGHVYGETATNSVVAIETNSPPICTCGCHQRLLLASHIAHEMREALWTQLGLTSCAGVAHNKLLAKLVGSTHKPNDQTTLYPHMLGSLMASLTKVTQVPGIGHSTGKKL-----SSMGITTLDQLIEAPLSVLKEEFGYQT----------ACTMQKLCQGHDESPVVQSG-PPQSISDEDSFRKCSSLQEAQVKMKALLCSLLQRLRKDG----RQPHTLRLSVRKYSRVHKWTRESRQCGMPDGILHSLQSDEDGTASKLLD------LCVGLFHKMVDTSQPFHLTLISVCFAKFQSQSRT-----TSDITKFFS 490          
BLAST of Gchil4474.t1 vs. uniprot
Match: A0A8B7ZRY7_ACAPL (DNA polymerase iota-like isoform X1 n=2 Tax=Acanthaster planci TaxID=133434 RepID=A0A8B7ZRY7_ACAPL)

HSP 1 Score: 192 bits (487), Expect = 3.740e-49
Identity = 147/455 (32.31%), Postives = 232/455 (50.99%), Query Frame = 0
Query:   13 TRAIIALDLDCFYASVAIRARPHLKDKPVVIVQKHLCVTSNYVARSRAKGAVQKMTPVSQALQKCPELVCIDGSDLTPFREASLEVITVVRAWLEERATKISSPLNRRSCICPCQRLGFDEVFIDVTGLTQAQIERGGAPFHFKGHVFGLTE--DDQ-------VRRTLMVASQIAHELRDHVTQKTELTICAGISNSKLLAKLAVNMNKPNDQSTFLSEHAAEYIATLSP-RALMGFGHNTHEKIIKWAEKHAAHTSVDTVAQVLLLFGIEPGGLQNLVEIVGTEKQARYLVDLCRGVDTSEVVDCGNAPKSMSAEDSCRSCDNMEDVNRRLTIQISRLVTRLRDDGMLFLRRPKTLTVSYR--FRGDGFTSTSRSVPMPVEIVSVCCSRQNKAIPKAIEGIRRTALAVLKQQAGVCTKNKFDLTLIAVGATNFTSVTTNNGNGFTEDISKFFA 455
            +R I+ +D+DCFYA V +   P L+ KP+ I QK+L VT NY+ARSR    V K+  ++ ALQ+CPELV + G DLT +RE S  +  ++R +         SP          +RLGFDE FIDV+ L    +E+  +     GH++G  +  +D          + L++ S IA+E+R+ +  + ++T C G++++KLLAKL  + +KPNDQ+T         + +L+    + G GH+T +K+        +   + T+ Q++            L E  G +  A  +  LC+G D + V+  G  P+S+S EDS R C +++D   ++   +  L+ RL+ DG    R+P TL +S R   +   +T  SR   MP  I     S ++ A+ K ++      L V      V T   F LTLI+V    F S T +  N     I+KFF+
Sbjct:   46 SRTIVHIDIDCFYAQVEMVRNPALRTKPLGIQQKYLLVTCNYIARSRG---VTKLMRITDALQRCPELVIVSGEDLTHYREMSYRITELLRQF---------SPT--------VERLGFDENFIDVSHLVSQHLEKEDSESEVCGHIYGKQDVGNDSPPACPCGCHQRLLIGSHIAYEMREALRMQLDITSCGGVAHNKLLAKLVGSAHKPNDQTTLFPHMVGSLMGSLTKVTQVPGIGHSTGKKL--------SSMGITTLTQLI------EAPFSMLKEEFGYQT-ASTMQKLCQGHDEAPVLQSG-PPQSISDEDSFRKCSSVQDARLKMKALLCSLLQRLKKDG----RQPHTLRLSVRKYSKVHKWTRESRQCGMPDGIQHSLQSDEDAAVSKLLD------LCVGLFHKMVDTSQPFHLTLISVCFAMFQSQTRSALN-----ITKFFS 449          
BLAST of Gchil4474.t1 vs. uniprot
Match: UPI00190131BA (DNA polymerase iota isoform X4 n=1 Tax=Salvelinus namaycush TaxID=8040 RepID=UPI00190131BA)

HSP 1 Score: 184 bits (467), Expect = 5.170e-48
Identity = 142/439 (32.35%), Postives = 217/439 (49.43%), Query Frame = 0
Query:    6 KRPRPAATRAIIALDLDCFYASVAIRARPHLKDKPVVIVQKHLCVTSNYVARSRAKGAVQKMTPVSQALQKCPELVCIDGSDLTPFREASLEVITVVRAWLEERATKISSPLNRRSCICPC-QRLGFDEVFIDVTGLTQAQIERG--GAPFHFKGHVFGLTEDD---QVRRTLMVASQIAHELRDHVTQKTELTICAGISNSKLLAKLAVNMNKPNDQSTFLSEHAAEYIATLSP-RALMGFGHNTHEKIIKWAEKHAAHTSVDTVAQVLLLFGIEPGGLQNLVEIVGTEKQARYLVDLCRGVDTSEVVDCGNAPKSMSAEDSCRSCDNMEDVNRRLTIQISRLVTRLRDDGMLFLRRPKTLTVS---YRFRGDGFTSTSRSVPMPVEIVSVCCSRQNKAIPKAIEGIRRTALAVLKQQAGVCTKNKFDLTLIAVGATN 434
            K P P   R I+  DLDCFYA V +   P L++ P+ I QK++ VT NYVAR      V K+  V+ A +KCP+LV + G DLT +RE S +V  ++ ++                  CP  +RLGFDE F+D+T + + +IE+    A + ++GHV+ L   D    V   L V S+IA ELR  +  K  LT CAGI+ SKLLAKL     KPN Q+T L E   + + +L+  R + G GH T +++            +  +A ++  FG+                 A+ L +L  G+D + V   G AP+S+S EDS +   +  +V +++   +S ++ R+  DG    R+P TL ++   Y      F+  SR  P+P  I     S    A+ + +      ++A+      V T   F LTL+ V  +N
Sbjct:   37 KVPVPPVQRVILHFDLDCFYAQVEMIRNPALRNVPLGIQQKYIIVTCNYVARDLG---VTKLMLVTDAKEKCPQLVLVKGEDLTHYRETSYKVTELLMSF------------------CPLVERLGFDENFMDITEMVERRIEQNPESAHYSYEGHVYNLDTSDAKVMVHPRLAVGSRIAAELRAEIHSKLGLTGCAGIATSKLLAKLVSGAFKPNQQTTLLPESVKDIMGSLNGLRKVPGVGHQTAKRLQALGLVSVQDLQLFPLADLVREFGV---------------STAQRLQNLALGIDDTPVTPTG-APQSLSDEDSFKKMSSTNEVWQKVKDLLSSILDRMHKDG----RQPLTLRLTIRRYSATNKWFSRESRQCPIPNHIGQKITSGNCDALAQLV------SMAMKLFHKMVDTNTAFHLTLLNVCFSN 428          
BLAST of Gchil4474.t1 vs. uniprot
Match: UPI0019546923 (DNA polymerase iota isoform X3 n=1 Tax=Oreochromis aureus TaxID=47969 RepID=UPI0019546923)

HSP 1 Score: 182 bits (463), Expect = 8.440e-48
Identity = 156/471 (33.12%), Postives = 231/471 (49.04%), Query Frame = 0
Query:    3 SGKKRPRPAATRAIIALDLDCFYASVAIRARPHLKDKPVVIVQKHLCVTSNYVARSRAKGAVQKMTPVSQALQKCPELVCIDGSDLTPFREASLEVITVVRAWLEERATKISSPLNRRSCICPC-QRLGFDEVFIDVTGLTQAQIERGGA--PFHFKGHVFGLTEDDQVRRT---LMVASQIAHELRDHVTQKTELTICAGISNSKLLAKLAVNMNKPNDQSTFLSEHAAEYIATL-SPRALMGFGHNTHEKIIKWAEKHAAHTSVDTVAQVLLLFGIEP---GGLQNLVEIVGTEKQARYLVDLCRGVDTSEVVDCGNAPKSMSAEDSCRSCDNMEDVNRRLTIQISRLVTRLRDDGMLFLRRPKTLTVS---YRFRGDGFTSTSRSVPMPVEI-VSVCCSRQNKAIPKAIEGIRRTALAVLKQQAGVCTKNKFDLTLIAVGATNF-TSVTTNNGNGFTEDISKFFAKST 458
            S  K P PA  R I+  DLDCFYA V +   P L++ P+ I QK++ VT NYVAR R    V K+  V+ A +KCPELV + G DLT +RE S ++  ++ ++                  CP  +RLGFDE F+DVT + + ++ +      F +KGHV+     D        L + S IA ELR+ V  K  LT CAGI+ +KLLAKL     KPN Q+T L E+ ++ +  L S R + G GH T +++                 Q L L  ++      L +LV+  G+   A+ L +L  GVD S V  C  AP+S+S EDS +   + ++V+ +    +S LV R+  DG    R+P+T  ++   Y      F+  SR  P+P  I   +C    + A+ + +    +    ++   A       F LTLI V  +N  T      G G    I+ FF++ T
Sbjct:   34 SISKTPVPAH-RVILHFDLDCFYAQVEMIRNPALREVPLGIQQKYIIVTCNYVARERG---VNKLMSVTDAKEKCPELVLVKGEDLTHYREMSYKMTELLMSY------------------CPLVERLGFDENFMDVTEMVEQRLAQTVKFEDFSYKGHVYNHPSADVKASKYPRLALGSHIAGELREAVHSKLGLTGCAGIATNKLLAKLVSGTFKPNQQTTLLPENISDIMGCLGSVRKVPGVGHQTAKRL-----------------QALGLVSVKDLQLCPLNDLVKEFGSPT-AQRLKNLALGVDDSPVT-CTGAPQSLSDEDSFKKMSSTKEVSEKTQQLLSSLVERMHKDG----RQPQTFRLTIRKYTTTNKWFSRESRQCPIPNHIGQKICSGSSDDAVMQLLPLAMKLFYRMVDYSA------PFHLTLINVCFSNLQTRAAAVTGKG---SITSFFSRGT 450          
BLAST of Gchil4474.t1 vs. uniprot
Match: UPI001F07C562 (DNA polymerase iota n=1 Tax=Hypomesus transpacificus TaxID=137520 RepID=UPI001F07C562)

HSP 1 Score: 186 bits (473), Expect = 1.500e-47
Identity = 145/434 (33.41%), Postives = 217/434 (50.00%), Query Frame = 0
Query:   11 AATRAIIALDLDCFYASVAIRARPHLKDKPVVIVQKHLCVTSNYVARSRAKGAVQKMTPVSQALQKCPELVCIDGSDLTPFREASLEVITVVRAWLEERATKISSPLNRRSCICPC-QRLGFDEVFIDVTGLTQAQIERGGAPFH--FKGHVFGLTEDDQVRRT-LMVASQIAHELRDHVTQKTELTICAGISNSKLLAKLAVNMNKPNDQSTFLSEHAAEYIATLSP-RALMGFGHNTHEKIIKWAEKHAAHTSVDTVAQVLLLFGIEPGGLQNLVEIVGT--EKQARYLVDLCRGVDTSEVVDCGNAPKSMSAEDSCRSCDNMEDVNRRLTIQISRLVTRLRDDGMLFLRRPKTLTVS---YRFRGDGFTSTSRSVPMPVEIVSVCCSRQNKAIPKAIEGIRRTALAVLKQQAGVCTKNKFDLTLIAVGATN 434
            A+ R I+  D+DCFYA V +   P L++ P+ I QK++ VT NYVAR      V K+  V+ AL+KCP+LV + G DLT +RE S +V  ++ ++                  CP  +RLGFDE F+D+T L + ++ +G       FKGHV+  +  D ++ + L V S IA ELR+ +  K  LT CAG++ +KLLAKL     KPN Q+T L E   + +  LS  R + G GH T +++                 Q L L  ++   L  L E+V       A+ L +L  G+D + V   G AP+S+S EDS +    ++DV +++   +  L+ R+  DG    R+P T  ++   Y      F+  SR  P+P  I     S    AI + I      ++A+      V T   F LTLI V  +N
Sbjct:   53 ASPRVILHFDMDCFYAQVEMIRTPALRNVPLGIQQKYIIVTCNYVARDHG---VTKLMSVTDALEKCPQLVMVKGEDLTHYRETSYKVTELLTSY------------------CPLVERLGFDENFMDITELVEKKLTKGNEATESSFKGHVYNHSNLDAMQHSRLAVGSHIAAELREDIHSKLGLTCCAGVATNKLLAKLVSGTFKPNQQTTLLPESIRDIMGRLSGLRKVPGVGHQTAKRL-----------------QALGLVSVQDLQLFPLAELVQEFGSSTAQRLHNLALGIDDAPVTPTG-APRSLSDEDSFKKISLVKDVLQKVEDLLGSLLERMYKDG----RQPLTFRLTIRKYSATNKWFSRESRQCPIPTHIGQKITSGSRDAIAQLI------SIALKLFHKMVDTSAAFHLTLINVCFSN 437          
BLAST of Gchil4474.t1 vs. uniprot
Match: UPI0014798E81 (DNA polymerase iota n=1 Tax=Pangasianodon hypophthalmus TaxID=310915 RepID=UPI0014798E81)

HSP 1 Score: 182 bits (462), Expect = 1.590e-47
Identity = 150/453 (33.11%), Postives = 226/453 (49.89%), Query Frame = 0
Query:   14 RAIIALDLDCFYASVAIRARPHLKDKPVVIVQKHLCVTSNYVARSRAKGAVQKMTPVSQALQKCPELVCIDGSDLTPFREASLEVITVVRAWLEERATKISSPLNRRSCICPC-QRLGFDEVFIDVTGLTQAQIERGG-APFHFKGHVFG---LTEDDQVRRTLMVASQIAHELRDHVTQKTELTICAGISNSKLLAKLAVNMNKPNDQSTFLSEHAAEYIATLS-PRALMGFGHNTHEKIIKWAEKHAAHTSVDTVAQVLLLFGIEPGGLQNLVEIVGTEKQARYLVDLCRGVDTSEVVDCGNAPKSMSAEDSCRSCDNMEDVNRRLTIQISRLVTRLRDDGMLFLRRPKTLTVSYRFRGDG---FTSTSRSVPMPVEIVSVCCSRQNKAIPKAIEGIRRTALAVLKQQAGVCTKNKFDLTLIAVGATNFTSVTTNNGNGFTEDISKFFAKS 457
            R I+  D+DCFYA V +   P L+ KPV + QK+L VT NYVAR+     V K+T V  AL+KCP LV + G DL+ +RE S +V  ++ ++                  CP  +RLG DE F+DVT + +++      +   F GH++G    + D Q   +L + S IA ELR+ +  +  LT CAG++NSKLLAKL     KPN Q+T L +  ++ +++LS P  + G G  T E++            V TV  + LL       L+ LV   G E  A+ +  L  GVD S V   G  P+S+S EDS +    + +   ++T  +  L+ R+R DG L    P+TL ++ R        F+  SR  P+P         R     P+A+  +   A+ +L++   V  +  F LTL+ +  TN  + T+N        IS FF  +
Sbjct:   28 RVILHFDMDCFYAQVEMIRNPALRSKPVGVHQKYLMVTCNYVARAHG---VAKLTSVKTALEKCPNLVLVRGEDLSFYREISYKVTELLMSY------------------CPLVERLGLDENFVDVTEMVESRRRNMDVSELSFVGHIYGHDVSSVDVQDHVSLALGSVIASELREVLFSRLGLTSCAGVANSKLLAKLVSGTFKPNQQTTLLPQSVSQLMSSLSGPSRVPGIGPRTAERL--------KALGVFTVTDLQLL------PLRPLVCEFG-EVNAKRIQSLACGVDLSPVTPAG-PPQSLSNEDSFKKISTLSEAESKITELLLGLIERMRKDGRL----PQTLKLTLRRNSAPSRWFSRESRQGPIPTHTAH----RIINGCPEAVPQLVSIAMKLLRKLVDV--REPFHLTLLNLCFTNLQAKTSNRIT-----ISSFFTST 428          
BLAST of Gchil4474.t1 vs. uniprot
Match: UPI001C89BD9B (DNA polymerase iota isoform X1 n=2 Tax=Puntigrus tetrazona TaxID=1606681 RepID=UPI001C89BD9B)

HSP 1 Score: 185 bits (470), Expect = 2.500e-47
Identity = 152/491 (30.96%), Postives = 246/491 (50.10%), Query Frame = 0
Query:    6 KRPRPAATRAIIALDLDCFYASVAIRARPHLKDKPVVIVQKHLCVTSNYVARSRAKGAVQKMTPVSQALQKCPELVCIDGSDLTPFREASLEVITVVRAWLEERATKISSPLNRRSCICPC-QRLGFDEVFIDVTGLTQAQIERGG-APFHFKGHVFG---LTEDDQVRRTLMVASQIAHELRDHVTQKTELTICAGISNSKLLAKLAVNMNKPNDQSTFLSEHAAEYIATLSPRALM-GFGHNTHEKIIKWAEKHAAHTSVDTVAQVLLLFGIEPGGLQNLVEIVGT--EKQARYLVDLCRGVDTSEVVDCGNAPKSMSAEDSCRSCDNMEDVNRRLTIQISRLVTRLRDDGMLFLRRPKTLTVS---YRFRGDGFTSTSRSVPMPVEI-VSVCCSRQNKAIPKAIEGIRRTALAVLKQQAGVCTKNKFDLTLIAVGATNFTSVTTNNGNGFTEDISKFFAKSTESEVGTHRRVNVLELDSGSASISTRA 484
            +R    + R I+  DLDCFYA V +   P L+ KP+ I QK++ VT NYVAR      V K+  V+ A++KCP+LV + G DLT +RE S +V  ++ +                   CP  +RLGFDE F+DVT + + ++++   +   F GH++    L  D++  R L V S IA E+R  + +   LT CAG++++KLLAKLA    KPN Q+T L    AE +++L+    + G G+ T EK+                 + L L G+    L  L ++     E  A+ + +L  G+D S V   G  P+S+S EDS +    +E+V ++    ++ L  R+R DG    R+P T  ++   Y      F   SR  P+P    + + C   ++A+P+ +      +L+       V T+  F LTL+ V  +N  + +++ G+     I+ FF KS  ++    R+V+  + +  + S  TRA
Sbjct:   28 ERLASVSQRVILHFDLDCFYAQVEMIRNPALRAKPLGIQQKYIIVTCNYVAREHG---VNKLMSVTDAVEKCPQLVLVKGEDLTHYREMSYKVTELLMSH------------------CPLVERLGFDENFMDVTEMVERRLKQTSISDLSFIGHIYKHEPLAVDEENAR-LAVGSVIASEMRQAIFRTLGLTGCAGVADNKLLAKLASGTFKPNQQTTLLPRSTAELMSSLAGLIKVPGIGYKTREKL-----------------KALGLVGVRDLQLCPLPDLAKEFGEVAAKRIQNLAWGIDDSPVTPAG-PPQSLSDEDSFKKISTLEEVQKKTEELLTNLTERMRKDG----RQPHTFRLTIRRYTVTNRWFNRESRQCPIPSHTGLKIACG-SSEAVPQLL------SLSEKLFHKMVDTREPFHLTLLNVCFSNLQAKSSSRGS-----IASFFQKSPTTQTTCQRQVDPDDFEPAANSQVTRA 462          
The following BLAST results are available for this feature:
BLAST of Gchil4474.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2V3INM3_9FLOR1.990e-23862.01DNA polymerase iota n=1 Tax=Gracilariopsis chorda ... [more]
R7QGB3_CHOCR2.090e-17149.29DNA Polymerase Iota n=1 Tax=Chondrus crispus TaxID... [more]
A0A7S3ENM2_9RHOD8.170e-5434.39Hypothetical protein n=1 Tax=Rhodosorus marinus Ta... [more]
UPI0018D9001A2.270e-5234.27DNA polymerase iota-like isoform X1 n=3 Tax=Patiri... [more]
A0A8B7ZRY7_ACAPL3.740e-4932.31DNA polymerase iota-like isoform X1 n=2 Tax=Acanth... [more]
UPI00190131BA5.170e-4832.35DNA polymerase iota isoform X4 n=1 Tax=Salvelinus ... [more]
UPI00195469238.440e-4833.12DNA polymerase iota isoform X3 n=1 Tax=Oreochromis... [more]
UPI001F07C5621.500e-4733.41DNA polymerase iota n=1 Tax=Hypomesus transpacific... [more]
UPI0014798E811.590e-4733.11DNA polymerase iota n=1 Tax=Pangasianodon hypophth... [more]
UPI001C89BD9B2.500e-4730.96DNA polymerase iota isoform X1 n=2 Tax=Puntigrus t... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR017961DNA polymerase, Y-family, little finger domainPFAMPF11799IMS_Ccoord: 313..437
e-value: 4.7E-13
score: 49.6
NoneNo IPR availableGENE3D3.40.1170.60coord: 23..83
e-value: 1.5E-16
score: 61.7
NoneNo IPR availableGENE3D3.30.160.60Classic Zinc Fingercoord: 507..534
e-value: 1.1E-5
score: 26.9
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 537..563
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 537..557
NoneNo IPR availablePANTHERPTHR46404DNA POLYMERASE IOTAcoord: 9..482
IPR043128Reverse transcriptase/Diguanylate cyclase domainGENE3D3.30.70.270coord: 84..220
e-value: 4.8E-24
score: 87.1
IPR001126UmuC domainPFAMPF00817IMScoord: 19..209
e-value: 1.9E-31
score: 109.1
IPR001126UmuC domainPROSITEPS50173UMUCcoord: 16..241
score: 29.000227
IPR036775DNA polymerase, Y-family, little finger domain superfamilyGENE3D3.30.1490.100coord: 313..441
e-value: 6.8E-21
score: 76.8
IPR036775DNA polymerase, Y-family, little finger domain superfamilySUPERFAMILY100879Lesion bypass DNA polymerase (Y-family), little finger domaincoord: 314..435
IPR043502DNA/RNA polymerase superfamilySUPERFAMILY56672DNA/RNA polymerasescoord: 10..306

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00004426_piloncontigtig00004426_pilon:468301..469992 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria chilensis NLEC103_M9 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gchil4474.t1Gchil4474.t1Gracilaria chilensis NLEC103_M9 malemRNAtig00004426_pilon 468301..469992 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gchil4474.t1 ID=Gchil4474.t1|Name=Gchil4474.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=polypeptide|length=564bp
MFSGKKRPRPAATRAIIALDLDCFYASVAIRARPHLKDKPVVIVQKHLCV
TSNYVARSRAKGAVQKMTPVSQALQKCPELVCIDGSDLTPFREASLEVIT
VVRAWLEERATKISSPLNRRSCICPCQRLGFDEVFIDVTGLTQAQIERGG
APFHFKGHVFGLTEDDQVRRTLMVASQIAHELRDHVTQKTELTICAGISN
SKLLAKLAVNMNKPNDQSTFLSEHAAEYIATLSPRALMGFGHNTHEKIIK
WAEKHAAHTSVDTVAQVLLLFGIEPGGLQNLVEIVGTEKQARYLVDLCRG
VDTSEVVDCGNAPKSMSAEDSCRSCDNMEDVNRRLTIQISRLVTRLRDDG
MLFLRRPKTLTVSYRFRGDGFTSTSRSVPMPVEIVSVCCSRQNKAIPKAI
EGIRRTALAVLKQQAGVCTKNKFDLTLIAVGATNFTSVTTNNGNGFTEDI
SKFFAKSTESEVGTHRRVNVLELDSGSASISTRAGQSASQLEGQKSESGG
NCELGTVATCPICRKTLPGSNLKQNNHIDNCLRTGNFRTKSSSKRPRSTS
NTRTVDSYFAKRT*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR017961DNA_pol_Y-fam_little_finger
IPR043128Rev_trsase/Diguanyl_cyclase
IPR001126UmuC
IPR036775DNA_pol_Y-fam_lit_finger_sf
IPR043502DNA/RNA_pol_sf