Gchil5367.t1 (polypeptide) Gracilaria chilensis NLEC103_M9 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGchil5367.t1
Unique NameGchil5367.t1
Typepolypeptide
OrganismGracilaria chilensis NLEC103_M9 male (Gracilaria chilensis NLEC103_M9 male)
Sequence length112
Homology
BLAST of Gchil5367.t1 vs. uniprot
Match: R7QD96_CHOCR (60S ribosomal protein L30 n=2 Tax=Rhodymeniophycidae TaxID=2045261 RepID=R7QD96_CHOCR)

HSP 1 Score: 202 bits (515), Expect = 8.870e-66
Identity = 102/111 (91.89%), Postives = 107/111 (96.40%), Query Frame = 0
Query:    1 MVKGKKKSTENVNQRLALVVKSGKYTLGYKSTIRTLRTGKAKLILIASNAAPLKKSELEYYAMLAKCQVHHFQGNNIDLGTACGRYFRTSAMAITDPGDSEIDSVFLNSES 111
            MVK KKK+TENVN RLALVVKSGKYTLG+KSTI+TLR+GKAKLILIASN APL+KSELEYYAMLAKCQVHHFQGNNIDLGTACGRYFRTSAMAITDPGDSEIDSVFLN ES
Sbjct:    1 MVKAKKKTTENVNARLALVVKSGKYTLGFKSTIKTLRSGKAKLILIASNTAPLRKSELEYYAMLAKCQVHHFQGNNIDLGTACGRYFRTSAMAITDPGDSEIDSVFLNQES 111          
BLAST of Gchil5367.t1 vs. uniprot
Match: Q7XYA1_GRIJA (Ribosome protein L30 n=1 Tax=Griffithsia japonica TaxID=83288 RepID=Q7XYA1_GRIJA)

HSP 1 Score: 183 bits (465), Expect = 3.750e-58
Identity = 92/111 (82.88%), Postives = 101/111 (90.99%), Query Frame = 0
Query:    1 MVKGKKKSTENVNQRLALVVKSGKYTLGYKSTIRTLRTGKAKLILIASNAAPLKKSELEYYAMLAKCQVHHFQGNNIDLGTACGRYFRTSAMAITDPGDSEIDSVFLNSES 111
            MVK KKK+TENVN RLALVV+SGKYTLG+KSTI+TLRTGKAKLILI+SN APL+KSELEYYAML+KC VHHF GNN +LGTACGRYFR SAMAITDPGDS+IDSVFL   S
Sbjct:    1 MVKSKKKNTENVNARLALVVRSGKYTLGFKSTIKTLRTGKAKLILISSNTAPLRKSELEYYAMLSKCPVHHFVGNNNELGTACGRYFRCSAMAITDPGDSDIDSVFLQQTS 111          
BLAST of Gchil5367.t1 vs. uniprot
Match: A0A1X6NUW6_PORUM (Ribosomal_L7Ae domain-containing protein n=1 Tax=Porphyra umbilicalis TaxID=2786 RepID=A0A1X6NUW6_PORUM)

HSP 1 Score: 152 bits (384), Expect = 8.570e-46
Identity = 72/98 (73.47%), Postives = 86/98 (87.76%), Query Frame = 0
Query:    5 KKKSTENVNQRLALVVKSGKYTLGYKSTIRTLRTGKAKLILIASNAAPLKKSELEYYAMLAKCQVHHFQGNNIDLGTACGRYFRTSAMAITDPGDSEI 102
            KKKS+ N+  RLALV+KSGKY+LGYKSTI+TLR+ K KL+LIASN  PL++SELEYYAMLAKC VHH+ GNN+DLGTACG+YFR SA+ ITD GDS+I
Sbjct:    4 KKKSSNNLGARLALVMKSGKYSLGYKSTIKTLRSDKCKLVLIASNTPPLRRSELEYYAMLAKCNVHHYPGNNVDLGTACGKYFRCSALGITDQGDSDI 101          
BLAST of Gchil5367.t1 vs. uniprot
Match: A0A8H8S398_9HELO (60S ribosomal protein L30 n=2 Tax=Lachnellula TaxID=47830 RepID=A0A8H8S398_9HELO)

HSP 1 Score: 152 bits (383), Expect = 1.080e-45
Identity = 72/102 (70.59%), Postives = 85/102 (83.33%), Query Frame = 0
Query:    1 MVKGKKKSTENVNQRLALVVKSGKYTLGYKSTIRTLRTGKAKLILIASNAAPLKKSELEYYAMLAKCQVHHFQGNNIDLGTACGRYFRTSAMAITDPGDSEI 102
            M   KKK+ E +N RLALV+KSGK TLGYKST++TLR+GKAKL++IA N  PL+KSELEYYAMLAKC VHHF GNNI+LGTACG+ FR S MA+ D GDS+I
Sbjct:    1 MAPAKKKNAEGINSRLALVIKSGKVTLGYKSTLKTLRSGKAKLVIIAGNTPPLRKSELEYYAMLAKCNVHHFAGNNIELGTACGKMFRCSTMAVLDAGDSDI 102          
BLAST of Gchil5367.t1 vs. uniprot
Match: A0A0D2NS00_9CHLO (60S ribosomal protein L30 n=1 Tax=Monoraphidium neglectum TaxID=145388 RepID=A0A0D2NS00_9CHLO)

HSP 1 Score: 152 bits (383), Expect = 1.180e-45
Identity = 69/97 (71.13%), Postives = 87/97 (89.69%), Query Frame = 0
Query:    6 KKSTENVNQRLALVVKSGKYTLGYKSTIRTLRTGKAKLILIASNAAPLKKSELEYYAMLAKCQVHHFQGNNIDLGTACGRYFRTSAMAITDPGDSEI 102
            KKS EN+N RLALV+KSGKYTLGYK+ ++TLR+GKAKLI+++SN  P++KSE+EYYAML+K  VHH+ GNN+DLGTACG+YFR S +AITDPGDS+I
Sbjct:   10 KKSQENINSRLALVMKSGKYTLGYKTCLKTLRSGKAKLIIVSSNCPPVRKSEIEYYAMLSKTGVHHYTGNNVDLGTACGKYFRVSVLAITDPGDSDI 106          
BLAST of Gchil5367.t1 vs. uniprot
Match: A0A383V3I6_TETOB (Ribosomal_L7Ae domain-containing protein n=4 Tax=Sphaeropleales TaxID=35491 RepID=A0A383V3I6_TETOB)

HSP 1 Score: 152 bits (383), Expect = 1.220e-45
Identity = 68/97 (70.10%), Postives = 87/97 (89.69%), Query Frame = 0
Query:    6 KKSTENVNQRLALVVKSGKYTLGYKSTIRTLRTGKAKLILIASNAAPLKKSELEYYAMLAKCQVHHFQGNNIDLGTACGRYFRTSAMAITDPGDSEI 102
            KKS EN+N RLALV+KSGKYTLGYK+ ++TLR+GKAKL++++SN  P++KSE+EYYAML+K  VHH+ GNN+DLGTACG+YFR S +AITDPGDS+I
Sbjct:    9 KKSQENINSRLALVMKSGKYTLGYKTCLKTLRSGKAKLVIVSSNCPPVRKSEIEYYAMLSKTGVHHYSGNNVDLGTACGKYFRVSVLAITDPGDSDI 105          
BLAST of Gchil5367.t1 vs. uniprot
Match: L8GX53_ACACA (60S ribosomal protein, putative n=1 Tax=Acanthamoeba castellanii str. Neff TaxID=1257118 RepID=L8GX53_ACACA)

HSP 1 Score: 152 bits (383), Expect = 1.220e-45
Identity = 71/100 (71.00%), Postives = 90/100 (90.00%), Query Frame = 0
Query:    3 KGKKKSTENVNQRLALVVKSGKYTLGYKSTIRTLRTGKAKLILIASNAAPLKKSELEYYAMLAKCQVHHFQGNNIDLGTACGRYFRTSAMAITDPGDSEI 102
            K +KK+ E++N RLALV+KSGKYTLGYKST+++LR GKAKLI+I++N  PL+KSE+EYYAMLAK  VHH+ GNNIDLGTACG+YFR S+++ITDPGDS+I
Sbjct:    5 KKQKKAQESINSRLALVMKSGKYTLGYKSTLKSLRQGKAKLIIISTNCPPLRKSEIEYYAMLAKTGVHHYTGNNIDLGTACGKYFRVSSLSITDPGDSDI 104          
BLAST of Gchil5367.t1 vs. uniprot
Match: A0A4P9XS80_9FUNG (60S ribosomal protein L30-like protein n=1 Tax=Thamnocephalis sphaerospora TaxID=78915 RepID=A0A4P9XS80_9FUNG)

HSP 1 Score: 151 bits (381), Expect = 2.460e-45
Identity = 70/101 (69.31%), Postives = 88/101 (87.13%), Query Frame = 0
Query:    2 VKGKKKSTENVNQRLALVVKSGKYTLGYKSTIRTLRTGKAKLILIASNAAPLKKSELEYYAMLAKCQVHHFQGNNIDLGTACGRYFRTSAMAITDPGDSEI 102
            +K  KK++E++N RLALV+KSGKYTLGY+ST++TLR GKAKLILIA N  PL+KSE+EYYAML+K  VHH+ GNNIDLGTACG+Y+R   ++ITDPGDS+I
Sbjct:    4 IKKSKKTSESINARLALVMKSGKYTLGYRSTLKTLRQGKAKLILIAGNCPPLRKSEIEYYAMLSKTGVHHYNGNNIDLGTACGKYYRVGVLSITDPGDSDI 104          
BLAST of Gchil5367.t1 vs. uniprot
Match: A0A397ID08_9GLOM (Ribosomal_L7Ae domain-containing protein n=7 Tax=Eukaryota TaxID=2759 RepID=A0A397ID08_9GLOM)

HSP 1 Score: 150 bits (380), Expect = 3.180e-45
Identity = 70/101 (69.31%), Postives = 86/101 (85.15%), Query Frame = 0
Query:    2 VKGKKKSTENVNQRLALVVKSGKYTLGYKSTIRTLRTGKAKLILIASNAAPLKKSELEYYAMLAKCQVHHFQGNNIDLGTACGRYFRTSAMAITDPGDSEI 102
            +K  KKSTE++N RLALV+KSGKYTLGYKST++TLR GKAKL++I+ N  PL+K ELEYYAML+K  VHH+ GNNIDLGTACG+YFR   ++ITD GDS+I
Sbjct:    3 IKKSKKSTESINSRLALVMKSGKYTLGYKSTLKTLRQGKAKLVIISGNCPPLRKHELEYYAMLSKTSVHHYSGNNIDLGTACGKYFRVGVLSITDAGDSDI 103          
BLAST of Gchil5367.t1 vs. uniprot
Match: UPI001E1E15D1 (60S ribosomal protein L30 n=2 Tax=Autobranchia TaxID=2785011 RepID=UPI001E1E15D1)

HSP 1 Score: 150 bits (380), Expect = 3.710e-45
Identity = 70/97 (72.16%), Postives = 84/97 (86.60%), Query Frame = 0
Query:    6 KKSTENVNQRLALVVKSGKYTLGYKSTIRTLRTGKAKLILIASNAAPLKKSELEYYAMLAKCQVHHFQGNNIDLGTACGRYFRTSAMAITDPGDSEI 102
            KKS EN+N RLALV+KSGKY LGYK T++TLR GKAKL++IASN  PL+KSE+EYYAMLAK  VHH+ GNNI+LGTACG+YFR   ++ITDPGDS+I
Sbjct:    8 KKSIENINSRLALVMKSGKYVLGYKQTLKTLRQGKAKLVIIASNTPPLRKSEIEYYAMLAKTGVHHYSGNNIELGTACGKYFRVCTLSITDPGDSDI 104          
The following BLAST results are available for this feature:
BLAST of Gchil5367.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
R7QD96_CHOCR8.870e-6691.8960S ribosomal protein L30 n=2 Tax=Rhodymeniophycid... [more]
Q7XYA1_GRIJA3.750e-5882.88Ribosome protein L30 n=1 Tax=Griffithsia japonica ... [more]
A0A1X6NUW6_PORUM8.570e-4673.47Ribosomal_L7Ae domain-containing protein n=1 Tax=P... [more]
A0A8H8S398_9HELO1.080e-4570.5960S ribosomal protein L30 n=2 Tax=Lachnellula TaxI... [more]
A0A0D2NS00_9CHLO1.180e-4571.1360S ribosomal protein L30 n=1 Tax=Monoraphidium ne... [more]
A0A383V3I6_TETOB1.220e-4570.10Ribosomal_L7Ae domain-containing protein n=4 Tax=S... [more]
L8GX53_ACACA1.220e-4571.0060S ribosomal protein, putative n=1 Tax=Acanthamoe... [more]
A0A4P9XS80_9FUNG2.460e-4569.3160S ribosomal protein L30-like protein n=1 Tax=Tha... [more]
A0A397ID08_9GLOM3.180e-4569.31Ribosomal_L7Ae domain-containing protein n=7 Tax=E... [more]
UPI001E1E15D13.710e-4572.1660S ribosomal protein L30 n=2 Tax=Autobranchia Tax... [more]

Pages

back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR004038Ribosomal protein L7Ae/L30e/S12e/Gadd45PFAMPF01248Ribosomal_L7Aecoord: 11..102
e-value: 5.5E-23
score: 80.5
IPR02906450S ribosomal protein L30e-likeGENE3D3.30.1330.30coord: 1..104
e-value: 2.4E-45
score: 154.5
IPR02906450S ribosomal protein L30e-likeSUPERFAMILY55315L30e-likecoord: 10..102
IPR039109Ribosomal protein L30/YlxQPANTHERPTHR11449RIBOSOMAL PROTEIN L30coord: 1..102
IPR022991Ribosomal protein L30e, conserved sitePROSITEPS00993RIBOSOMAL_L30E_2coord: 78..98
IPR022991Ribosomal protein L30e, conserved sitePROSITEPS00709RIBOSOMAL_L30E_1coord: 22..46

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00004418_piloncontigtig00004418_pilon:1291475..1291901 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria chilensis NLEC103_M9 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gchil5367.t1Gchil5367.t1Gracilaria chilensis NLEC103_M9 malemRNAtig00004418_pilon 1291475..1291901 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gchil5367.t1 ID=Gchil5367.t1|Name=Gchil5367.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=polypeptide|length=112bp
MVKGKKKSTENVNQRLALVVKSGKYTLGYKSTIRTLRTGKAKLILIASNA
APLKKSELEYYAMLAKCQVHHFQGNNIDLGTACGRYFRTSAMAITDPGDS
EIDSVFLNSES*
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR004038Ribosomal_L7Ae/L30e/S12e/Gad45
IPR029064L30e-like
IPR039109L30/L30e/YlxQ
IPR022991Ribosomal_L30e_CS