Gchil6727.t1 (polypeptide) Gracilaria chilensis NLEC103_M9 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGchil6727.t1
Unique NameGchil6727.t1
Typepolypeptide
OrganismGracilaria chilensis NLEC103_M9 male (Gracilaria chilensis NLEC103_M9 male)
Sequence length371
Homology
BLAST of Gchil6727.t1 vs. uniprot
Match: A0A2V3J4L3_9FLOR (Transcriptional regulatory protein rxt3 n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J4L3_9FLOR)

HSP 1 Score: 280 bits (715), Expect = 3.030e-88
Identity = 161/374 (43.05%), Postives = 225/374 (60.16%), Query Frame = 0
Query:    1 MKRARPSS-ARRDSAAVDGA-QVMRRHFMEHILPLPSHTRRHHDNRTSRPLKRTRHHEASPSSR-PPSMSLQATPHFIYAPNRFLDVEKLLKARSERIVSVHIPSDHFTQPSTAVRNRFLWGTDVYTDDSDLVAVLIHTGYVTMHTNPPFEYLTVKLKLRPHVFRSSPPFQSTERYAMCSRAWGSAYNGARISVLSVQAVDANRKYFITPHSPEHSPAFLPGIVLA-PRLNVSKGTKSVPRRSATSICFDMLNEPSQTYSIIDVTSLFDDARNPFNRLKREVLYVENDLHRFEICRVTNRQNLVRFGRVKDNVFLQEMLAELGVRGKSRCPLCRENLANVQELSWKEIYWDIDGVSVNGEWYPLTKLSFRKICE 370
            MKR+R S+ +RR+S+AV     ++RR  ME +   PS  R+H  +    P KR R    +P S+ PP   L   PH+IY+P R L ++ LL + S   + VH+P++H T  + A+RNR LWGTD YTDDSDLVA+L+HTGY ++HT PP +YLTV L+++PH    SP F S+ R ++ SR W S Y GARISVL V A   N K    P  P  S   LPGIVL+ P    +   K+      T + FD+LN P  TY+I  + SL   + +P +RL   VLY+EN   RFE+ R +   N VRF +V++    + +LA + V   + CP+   +L  VQ L W+ ++WD+ GV+V G+WY LTK+SF+K  E
Sbjct:    1 MKRSRTSNPSRRNSSAVHAVPHLVRRSLMEQVHIPPS--RKHFSSNP--PPKRAR--LLNPRSQSPPKQKLP--PHYIYSPTRLLPIQSLLSSNSSATIHVHVPAEHLTPRNAALRNRLLWGTDFYTDDSDLVAILVHTGYYSLHTTPPCDYLTVTLRVQPHQSNRSPHFISSTRNSISSRYWPSTYKGARISVLFVNATH-NNKVTRQPRQPPQSALRLPGIVLSHPSACSTASVKAATSYFPTQLSFDLLNNPCTTYNINYLASLKSSSESPLHRLNTHVLYLENHSQRFEVHRPSPLSNTVRFAQVRNVALFRSILAHVHVSTDAPCPMKPADLTAVQHLPWQHLHWDLSGVTVKGQWYQLTKMSFQKRTE 365          
BLAST of Gchil6727.t1 vs. uniprot
Match: A0A2P6TV07_CHLSO (Zinc finger CCCH domain-containing 13-like n=1 Tax=Chlorella sorokiniana TaxID=3076 RepID=A0A2P6TV07_CHLSO)

HSP 1 Score: 111 bits (277), Expect = 5.440e-24
Identity = 96/299 (32.11%), Postives = 142/299 (47.49%), Query Frame = 0
Query:   89 KARSERIVSVHIPSDHFTQPSTAVRNRFLWGTDVYTDDSDLVAVLIHTGY-VTMHTNPPFEYLTVKLKLRPHVFRSSPPFQSTERYAMCSRAWGSAYNGARISVLSVQAVD-ANRKYFITPHS---PEHSPAFLPGIVLAPRLNVSKGTKSVPRR-SATSICFDMLNEPSQTYSIIDVTSLFDDARNPFN----RLKREVLYVENDLHRFEICRVTNRQNLV-----------RFGRVKDNVFLQEMLAELGVRGKSRCPLCRENLANVQE-LSWKEIYWDIDGVSVNGEWYPLTKLSF 365
            K  + + V V IP+   T  +  VR R LWG+DVYT+DSDLVAVL+H GY     T+PP +   V+  L+P   R S P  ST R ++ SRAW +   G   SV     V  +     + P+    P  +P F P   +   +  S G     R+    ++ F+++NEP   Y++  V    D    P      RL   VLY+E+   RFE+   +   N             RF R K  +    ++++LGV      PL     + + E LSW+EI W  +GVS+ G+ +PL ++ F
Sbjct:   64 KDGASQSVEVRIPAHCLTSNNRHVRARQLWGSDVYTEDSDLVAVLMHCGYWYHSLTHPPAQVAEVRAVLKPQEPRDSYP--STARNSIRSRAWAAPIEGCSYSVEKCWVVTRSGTSVDLAPNLEGLPAAAPTFTPSH-MERIITRSSGAGGRQRQVQEVTVMFNLVNEPWPKYNMQAVA---DRGLKPHEWTSARLHSTVLYLESHKERFELALASPAGNEADGEAAGGGERYRFSRCKRPL-PAAVMSKLGV------PLPESERSVLHEGLSWEEIQWGANGVSLRGQLFPLVRIHF 349          
BLAST of Gchil6727.t1 vs. uniprot
Match: A0A7S2FCQ0_9EUKA (Hypothetical protein n=1 Tax=Haptolina brevifila TaxID=156173 RepID=A0A7S2FCQ0_9EUKA)

HSP 1 Score: 110 bits (276), Expect = 6.730e-24
Identity = 90/301 (29.90%), Postives = 139/301 (46.18%), Query Frame = 0
Query:   73 HFIYAPNRFLDVEKLLKARSERIVSVHIPSDHFTQPSTAVRNRFLWGTDVYTDDSDLVAVLIHTGYVTMHTNPPFEYLTVKLKLRPHVFRSSPPFQSTERYAMCSRAWGSAYNGARISVLSVQAVDANR--KYFITPHSPEHSPAFLPGIVLAPRLNVSKGTKSVPRRSATSICFDMLNEPSQTYSIIDVTSLFDDA-RNPFNRLKREVLYVENDLHRFEICRVTNRQNLVRFGRVKDNVFLQEMLA--ELGVRGKSRC--PLCRENLANVQE-LSWKEIYWDIDGVSVNGEWYPLTKLSF 365
            H +Y+P     V   L ++   +V V +P+ H T  S  VR R LWGTD+YTDDSDLVAVL+HTG+V +    P   L V L++ P        + ++ER  + SR W   + G    V       A    +  ++   P      +PG ++  ++    G       +A  + F + NEP   YS+  V     D  R    R++RE +Y+E+   RFE+   T +Q     G   D   L ++L   E+  R       PL R  +  + E L W+E+ W    V V G+ +PL ++ +
Sbjct:   56 HLVYSP---CVVPPELPSKMNSLVEVLLPAKHLTSDSKQVRLRQLWGTDIYTDDSDLVAVLVHTGHVKLKATAPKTPLLVSLRVCP----MQASYATSERNGLRSREWSGKHGGVSYKVERCLQHTAGTVPQPELSMLQPNPLTRQIPGSLV--QIAPGPGKSFAVPPAACLVVFSLSNEPWLKYSLALVADQGTDRERWTSTRMRREAMYLESSSRRFEL---TLQQPAATDGEF-DKYTLSQVLEPHEMDRRALEAAGVPLPRSAVQLLHEDLDWEELVWGPGFVRVRGDEFPLLRMLY 343          
BLAST of Gchil6727.t1 vs. uniprot
Match: A0A7S0KI70_9CHLO (Hypothetical protein n=2 Tax=Ostreococcus mediterraneus TaxID=1486918 RepID=A0A7S0KI70_9CHLO)

HSP 1 Score: 110 bits (276), Expect = 1.430e-23
Identity = 89/287 (31.01%), Postives = 141/287 (49.13%), Query Frame = 0
Query:   93 ERIVSVHIPSDHFTQPSTAVRNRFLWGTDVYTDDSDLVAVLIHTGYVTMHTNPPFEYLTVKLKLR--PHVFRSSPPFQSTERYAMCSRAWGSAYNGARISVLSVQAVDANRKYF-ITPHSPEH---SPAFLP---GIVLAPRLNVSKGTKSVPRRSATSICFDMLNEPSQTYSIIDVTSL-FDDARNPFNRLKREVLYVENDLHRFEICRVTNRQN---LVRFGRVKDNVFLQEMLAELGVRGKSRCPLCRENLANVQE-LSWKEIYWDIDGVSVNGEWYPLTKLSF 365
            E ++ V IP++  +  +  +R R LWGTD YT DSDL+AVL H GY       P     V++ +R  PH     P   ST R  + SRAWG+  +G    + S +AV +N     +TP +  H   +P F P     V+  R + +   +        +I +++ NEP   YSI  V    F  +     RL+R+VLY+E    RFE+  +  ++N     R+   K  + L +M  E+GV      PL + ++  + + L W EI W ++ + V G+ Y +++L F
Sbjct:  122 EGVLDVKIPAEATSSANAHLRTRQLWGTDTYTADSDLMAVLTHAGYYRPSATVPPTLAEVRVIVRAAPHPEDGYP---STSRNGIRSRAWGTMQDGVGFVIESARAVTSNNASIDLTPSAGTHKVVAPTFFPVEKEHVVHTRNSAANSDRKKGMIREVTIQYNLCNEPWMKYSISLVADQGFKKSLWTCARLRRDVLYLETQRTRFELSWLKGKENDEDKFRWSVSKKPLPLDKM-REVGV------PLPKAHVDVIDDDLRWDEINWGLNSLFVRGKEYQVSRLQF 398          
BLAST of Gchil6727.t1 vs. uniprot
Match: A0A7S3BQR7_9EUKA (Hypothetical protein n=1 Tax=Haptolina ericina TaxID=156174 RepID=A0A7S3BQR7_9EUKA)

HSP 1 Score: 108 bits (269), Expect = 4.110e-23
Identity = 89/301 (29.57%), Postives = 137/301 (45.51%), Query Frame = 0
Query:   75 IYAPNRFLDVEKLLKARSERIVSVHIPSDHFTQPSTAVRNRFLWGTDVYTDDSDLVAVLIHTGYVTMHTNPPFEYLTVKLKLRPHVFRSSPPFQSTERYAMCSRAWGSAYNGARISVL-----SVQAVDANRKYFITPHSPEHSPAFLPGIVLAPRLNVSKGTKSVPRRSATSICFDMLNEPSQTYSIIDVTSLFDDARNPFN----RLKREVLYVENDLHRFEICRVTNRQNLVRFGRVKDNVFLQEMLAELGVRGKSRCPLCRENLANVQE-LSWKEIYWDIDGVSVNGEWYPLTKLSF 365
            +Y PN  +     L  +   +V V +P+ + +  +  V+ R LWGTDVYTDDSDLVAVL+HTG++ +  +     L V L++ P    +   + S+ER  + SR W  ++ G    V      +   V       + P +       +PG  LAP L    G        A  + F++ N+P   YS+  V    D A  P      RL+RE LY+E+   RFE+  V   Q    + R   +  L+  L +      S  PL  + +  + E L W+E+ W    + V GE YPL +  +
Sbjct:   33 VYQPNTVISE---LSKKMNSLVEVLLPARYLSGETKQVKLRQLWGTDVYTDDSDLVAVLVHTGHIKLKGSSTKNTLLVSLRVCP----AQASYASSERNGIRSREWSKSHPGVSFKVERCLQHTAATVPPAELSMLRPGAATRQ---IPGS-LAPLL-AGPGQSFSVSPPACVVVFNLANDPCLKYSLALVA---DQATEPDRWTSMRLRREALYLESRHRRFEL--VQTGQGSDGYDRYALSEVLRPQLMDRKAMEASGVPLPAKQVRRLHEDLDWEELVWGPCFMRVRGEEYPLVRALY 316          
BLAST of Gchil6727.t1 vs. uniprot
Match: A0A161WVP9_DAUCS (Autophagy-related protein n=2 Tax=Daucus carota subsp. sativus TaxID=79200 RepID=A0A161WVP9_DAUCS)

HSP 1 Score: 110 bits (275), Expect = 4.530e-23
Identity = 94/301 (31.23%), Postives = 140/301 (46.51%), Query Frame = 0
Query:   96 VSVHIPSDHFTQPSTAVRNRFLWGTDVYTDDSDLVAVLIHTGYVTMHTNPPFEYLTVKLKLRPHVFRSSPP---FQSTERYAMCSRAWGS----AYNGARISVLSVQAVDANRKYFITPHSPEHSPAFLPGIVLAPRLNVSKGTKSVPRRSATSICFDMLNEPSQTYSIIDVTS------LFDDARNPFNRLKREVLYVENDLHRFEIC----RVTNRQ-------------NLVRFGRVKDNVFLQEMLAELGVRGKSRCPLCRENLANVQE-LSWKEIYWDIDGVSVNGEWYPLTKLSF 365
            + + IP++H T  +  VR   LWGTD+YTDDSD+VAVL+H GY     +PP   L    +LR  V R  PP   + S+ R  + SRAWG+    +Y      ++       N     +P  P  +P  +    +  R   +  +K         I F++ NEP   YSI  V        LF  AR        EVLY+EN   R+E+C    +V  R+             +L R+ R K  +  QE++  LG+      PL  EN+  +++ L W++I W   GV + G+ YPL ++ F
Sbjct:  204 LEMRIPAEHVTATNRQVRGNRLWGTDIYTDDSDIVAVLMHLGYCRTTASPPPSALQ---ELRA-VIRLLPPQKCYLSSLRNDIRSRAWGAPTECSYRVESCCIIKRGGGTINLDPCTSPIEPTLAPMVVEK-TMTTRAAAANASKQQRFAQEVMIQFNLCNEPWIMYSINAVADRGLEKPLFTSARLKMG----EVLYLENHACRYELCFVKEKVVKRETKDPANIAESESIDLFRWSRCKKPL-PQELMLSLGI------PLPLENVEVLEDNLEWEDINWSPSGVWIAGKEYPLNRVHF 488          
BLAST of Gchil6727.t1 vs. uniprot
Match: C1E6Q9_MICCC (Uncharacterized protein n=2 Tax=Micromonas TaxID=38832 RepID=C1E6Q9_MICCC)

HSP 1 Score: 108 bits (269), Expect = 1.380e-22
Identity = 90/299 (30.10%), Postives = 142/299 (47.49%), Query Frame = 0
Query:   95 IVSVHIPSDHFTQPSTAVRNRFLWGTDVYTDDSDLVAVLIHTGYVTMHTNPPFEYLTVKLKLRPHVFRSSPP---FQSTERYAMCSRAWGSAYNGARISVLSVQAVDANRKYFITPHSPEH----SPAFLPGIVLAPRLNVSKGTKSVPRRSA----TSICFDMLNEPSQTYSIIDVTSL-FDDARNPFNRLKREVLYVENDLHRFEICR---VTNRQ------------NLVRFGRVKDNVFLQEMLAELGVRGKSRCPLCRENLANVQE-LSWKEIYWDIDGVSVNGEWYPLTKLSF 365
            +V V IP++     +  VR+R LWGTDVYT DSD+VA L+HTG+    +  P + L +    R     + PP   + ST R  + SR+WG    G    V + +A+  N +       PE     +P F P +V +  +N      +  RR       +I +++ NEP   YS+  V    F  +     RL+RE LY+E    R+E+     V + +            ++ R+GR      L++  AELGV      PL +E L +V   + W EI +D++ V++ GE Y + +L +
Sbjct:  110 LVEVKIPAECTVNTNQQVRSRQLWGTDVYTSDSDVVAALMHTGFWLPGSTCPPQLLELVATAR-----AVPPAEQYLSTSRNGIRSRSWGRVLTGFSYKVEACRAITVNNQTIELTGDPERIKPCAPTFFPNVVESV-VNTRASQANAERRQRLIQEVTIQYNLCNEPWLKYSVASVCDRGFKRSEWTSARLRRETLYLETHTKRYELSYDGPVFDEEEENYDEVNAPEADVYRWGRCATPRDLRQT-AELGV------PLPKEELVDVVTGVKWNEIGFDLNSVTIKGEEYKVVRLQW 395          
BLAST of Gchil6727.t1 vs. uniprot
Match: R7Q7C8_CHOCR (Uncharacterized protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7Q7C8_CHOCR)

HSP 1 Score: 105 bits (262), Expect = 1.450e-22
Identity = 89/281 (31.67%), Postives = 134/281 (47.69%), Query Frame = 0
Query:  100 IPSDHFTQPSTAVRNRFLWG--TDVYTDDSDLVAVLIHTGYVTMHTNPP------FEYLTVKLKLRPHVFRSSPPFQSTERYAMCSRAW-GSAYNGA--RISVLSVQAVDANRKYFITPHSPEHSPAFLPGIVLAPRLNVSKGTKSVPRRSATSICFDMLNEPSQTYSIIDVTSLFDDARNPFNRLKREVLYVENDLHRFEICRVTNRQNLVRFGRVKDNVFLQEMLAELGVRGKSRCPLCR---ENLANVQELSWKEIYWDIDGVSVNGEWYPLTKLSFR 366
            IP+  FT  + A+  R +WG    VYTDDSDLVAVL H G+      PP       +++ V ++L     +    F S E     SRAW G  Y G   R+  + +Q +  + K  +        PA +PG+V         G K   R     + FD+ N+P   Y    +  +  +  +   RL+ EVLYVEN+  R+E+ RV+N    VRF RVK +V  +  +A + ++     PL     E L   +++ W  +YWD +GV +    Y L+K+ FR
Sbjct:    2 IPAHDFTAANPALHARLVWGGRDGVYTDDSDLVAVLAHAGWFV----PPNVQLLNLQHVCVAVRLFK---KEGVRFDSVEGGRGVSRAWLGHKYEGCCMRVETVELQYLGDDVKR-VPRRKWSKGPADVPGLV-----PFGAGGKKRARGDVL-LLFDLCNDPCAMYECGRMEGVQSEVED---RLETEVLYVENEHTRYEVARVSNG---VRFARVKKSVIERGRVAGI-LKESQNVPLGDTDIEVLHPSKQVPWSTLYWDAEGVKLGKNHYTLSKMMFR 261          
BLAST of Gchil6727.t1 vs. uniprot
Match: A0A7S3SNN0_9SPIT (Hypothetical protein n=1 Tax=Strombidinopsis acuminata TaxID=141414 RepID=A0A7S3SNN0_9SPIT)

HSP 1 Score: 106 bits (264), Expect = 2.050e-22
Identity = 90/295 (30.51%), Postives = 133/295 (45.08%), Query Frame = 0
Query:   90 ARSERIVSVHIPSDHFTQPSTAVRNRFLWGTDVYTDDSDLVAVLIHTGYVTMHTNPPFEYLTVKLKLRPHVFRSSPPFQSTERYAMCSRAWGSAYNGARISVL-----SVQAVDANRKYFITPHSPEHSPAFL----PGIVLAPRLNVSKGTKSVPRRSATSICFDMLNEPSQTYSIIDVTSLFDDARNP----FNRLKREVLYVENDLHRFEIC-RVTNRQNLVRFGRVKDNVFLQEMLAELGVRGKSRCPLCRENLANV--QELSWKEIYWDIDGVSVNGEWYPLTKLSFRKI 368
            AR   +V V +PS + T  S A++ R LWGTD+YTDDSDLVAVL+HTG+V +    P   L V L+  P        + S+ER  + SR W   + G    V      +  +V   R   + P      P  L    PG           G   +   +A  + F++ NEP   YS+  V    D A +P      RL+REVLY+E+   RFE+  R T+      +      V   + +    + G    PL + NL  V   ++ W++I W    + + G  YPL +L +  +
Sbjct:   47 ARIGSLVEVLLPSRYLTNESKAIQQRRLWGTDIYTDDSDLVAVLVHTGHVKLKAAVPKMPLLVSLRACP----VQTTYASSERNGLRSRDWTETHTGVSYKVERCLQHTAGSVPEPRLSLLRPGPSRQMPTSLYPQDPG----------PGESFLVPPAACLVVFNLSNEPCYKYSLALVA---DQATSPDRWTATRLRREVLYLESKQRRFELAHRGTSPTGFDTYSF--SQVLNPQAMDRRALEGHG-VPLPK-NLVKVLHSDVDWEDIQWGPCYLRLRGVEYPLVRLQYMPL 320          
BLAST of Gchil6727.t1 vs. uniprot
Match: A0A7S0ITN4_9EUKA (Hypothetical protein n=1 Tax=Calcidiscus leptoporus TaxID=127549 RepID=A0A7S0ITN4_9EUKA)

HSP 1 Score: 103 bits (256), Expect = 3.390e-21
Identity = 90/326 (27.61%), Postives = 147/326 (45.09%), Query Frame = 0
Query:   54 HHEASPSSRPPSMSLQATPHFIYAPNRFLDVEKLLKARSERIVSVHIPSDHFTQPSTAVRNRFLWGTDVYTDDSDLVAVLIHTGYVTMHTNPPFEYLTVKLKLRPHVFRSSPPFQSTERYAMCSRAWGS-----AYNGARISVLSVQAVDANRKYFITPHSPEHSPAFLPGIVLAPRLNVSKGTKSVPRRSATSICFDMLNEPSQTYSIIDVTSLFDDARNPFN----RLKREVLYVENDLHRFEICRVTNRQNLVRFGRVKDNVFLQEMLAELGVRGKSR----CPLCRENLANVQ-ELSWKEIYWDIDGVSVNGEWYPLTKLSF 365
            H E   + +P    + A  H +Y P   L     L ++   +V V +P+ + T    +V+ R LWGTDVYTDDSDLVA L+HTG+V +    P   L V L++ P    S   +  +ER  + SR W       +Y   R    +  +V       + P  P      +PG +  P+L    G   V   SA  + F++ NEP   YS+   + + D    P      RL+REV+Y+E+   RFE+   + ++     G   D   + +++    +  ++      PL  E++  +  E+ W+E+ W    +   G  Y L ++ F
Sbjct:   25 HAEPPEAKKPRQDDVNAAQH-VYQPCALLPA---LSSKVNSLVEVLLPAKYLTSDLKSVKLRRLWGTDVYTDDSDLVAALVHTGHVKLKAAAPKLPLLVSLRVCP----SQTSYSGSERNGLASRDWTKEHCSVSYKIERCLQHTAGSVPLPEMSLLRP-GPSRQ---IPGSIF-PQL-AGPGQSFVVPMSAAQVVFNLSNEPCYKYSL---SLIADQGTTPSRWTSGRLRREVIYLESRHRRFELALTSQKKGTD--GHEYDVYSVSQVMRPFTMDRRAMEAAGVPLPAEHVKVMHAEVDWEELVWGPQFLRCRGVEYQLVRILF 331          
The following BLAST results are available for this feature:
BLAST of Gchil6727.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2V3J4L3_9FLOR3.030e-8843.05Transcriptional regulatory protein rxt3 n=1 Tax=Gr... [more]
A0A2P6TV07_CHLSO5.440e-2432.11Zinc finger CCCH domain-containing 13-like n=1 Tax... [more]
A0A7S2FCQ0_9EUKA6.730e-2429.90Hypothetical protein n=1 Tax=Haptolina brevifila T... [more]
A0A7S0KI70_9CHLO1.430e-2331.01Hypothetical protein n=2 Tax=Ostreococcus mediterr... [more]
A0A7S3BQR7_9EUKA4.110e-2329.57Hypothetical protein n=1 Tax=Haptolina ericina Tax... [more]
A0A161WVP9_DAUCS4.530e-2331.23Autophagy-related protein n=2 Tax=Daucus carota su... [more]
C1E6Q9_MICCC1.380e-2230.10Uncharacterized protein n=2 Tax=Micromonas TaxID=3... [more]
R7Q7C8_CHOCR1.450e-2231.67Uncharacterized protein n=1 Tax=Chondrus crispus T... [more]
A0A7S3SNN0_9SPIT2.050e-2230.51Hypothetical protein n=1 Tax=Strombidinopsis acumi... [more]
A0A7S0ITN4_9EUKA3.390e-2127.61Hypothetical protein n=1 Tax=Calcidiscus leptoporu... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR013951Histone deacetylation protein Rxt3PFAMPF08642Rxt3coord: 98..143
e-value: 3.1E-12
score: 47.3
IPR036609LCCL domain superfamilyGENE3D2.170.130.20coord: 81..189
e-value: 4.1E-5
score: 25.5
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..69

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00004416_piloncontigtig00004416_pilon:610697..611809 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria chilensis NLEC103_M9 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gchil6727.t1Gchil6727.t1Gracilaria chilensis NLEC103_M9 malemRNAtig00004416_pilon 610697..611809 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gchil6727.t1 ID=Gchil6727.t1|Name=Gchil6727.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=polypeptide|length=371bp
MKRARPSSARRDSAAVDGAQVMRRHFMEHILPLPSHTRRHHDNRTSRPLK
RTRHHEASPSSRPPSMSLQATPHFIYAPNRFLDVEKLLKARSERIVSVHI
PSDHFTQPSTAVRNRFLWGTDVYTDDSDLVAVLIHTGYVTMHTNPPFEYL
TVKLKLRPHVFRSSPPFQSTERYAMCSRAWGSAYNGARISVLSVQAVDAN
RKYFITPHSPEHSPAFLPGIVLAPRLNVSKGTKSVPRRSATSICFDMLNE
PSQTYSIIDVTSLFDDARNPFNRLKREVLYVENDLHRFEICRVTNRQNLV
RFGRVKDNVFLQEMLAELGVRGKSRCPLCRENLANVQELSWKEIYWDIDG
VSVNGEWYPLTKLSFRKICE*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR013951Rxt3
IPR036609LCCL_sf