Gchil1427.t1 (polypeptide) Gracilaria chilensis NLEC103_M9 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGchil1427.t1
Unique NameGchil1427.t1
Typepolypeptide
OrganismGracilaria chilensis NLEC103_M9 male (Gracilaria chilensis NLEC103_M9 male)
Sequence length158
Homology
[Close]
BLAST of Gchil1427.t1 vs. uniprot
Match: UPI0003746042 (DUF839 domain-containing protein n=1 Tax=Methylosarcina fibrata TaxID=105972 RepID=UPI0003746042)

HSP 1 Score: 59.7 bits (143), Expect = 1.700e-7
Identity = 36/108 (33.33%), Postives = 49/108 (45.37%), Query Frame = 0 
Query:   56 SEADSVPPEDATVANMRLKLAPGLRADYVTRNTGSKGDMMVFGPSEDSYIELVICNEYVRSDLGD--------NPGMQRIFVETGHVDIIAFAIDRSDGVRTIAWSNI 155
            SE   VP      A   +KLAPGL+AD V+R      DM+ F P++     +V C E   S +G          P +Q I + TG V  I   +   DG+R   W+ I
Sbjct:   49 SETTGVPRAPEQTAASLIKLAPGLKADIVSRKIADSSDMIAFWPNDVHPTHIVSCVEAGNSQIGTYDGTVPKLEPSVQTIELATGEVRTILRGMISCDGIRRTPWNTI 156
The following BLAST results are available for this feature:
BLAST of Gchil1427.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
UPI00037460421.700e-733.33DUF839 domain-containing protein n=1 Tax=Methylosa... [more]
back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 17..157
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..1
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 13..16
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 2..12
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..16

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00004414_piloncontigtig00004414_pilon:1001846..1002319 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria chilensis NLEC103_M9 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gchil1427.t1Gchil1427.t1Gracilaria chilensis NLEC103_M9 malemRNAtig00004414_pilon 1001846..1002319 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gchil1427.t1 ID=Gchil1427.t1|Name=Gchil1427.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=polypeptide|length=158bp
MVCLILLALSVLETLTAICSTFVTREETNFGLMVRNKFIYKSLSLLRIND
LKQPASEADSVPPEDATVANMRLKLAPGLRADYVTRNTGSKGDMMVFGPS
EDSYIELVICNEYVRSDLGDNPGMQRIFVETGHVDIIAFAIDRSDGVRTI
AWSNIYH*
back to top