Gchil2845.t1 (polypeptide) Gracilaria chilensis NLEC103_M9 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGchil2845.t1
Unique NameGchil2845.t1
Typepolypeptide
OrganismGracilaria chilensis NLEC103_M9 male (Gracilaria chilensis NLEC103_M9 male)
Sequence length328
Homology
The following BLAST results are available for this feature:
BLAST of Gchil2845.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 0
Match NameE-valueIdentityDescription
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D3.10.10.10HIV Type 1 Reverse Transcriptase, subunit A, domain 1coord: 265..327
e-value: 3.9E-7
score: 32.1
IPR043502DNA/RNA polymerase superfamilySUPERFAMILY56672DNA/RNA polymerasescoord: 254..327

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00004406_piloncontigtig00004406_pilon:888495..889478 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria chilensis NLEC103_M9 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gchil2845.t1Gchil2845.t1Gracilaria chilensis NLEC103_M9 malemRNAtig00004406_pilon 888495..889478 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gchil2845.t1 ID=Gchil2845.t1|Name=Gchil2845.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=polypeptide|length=328bp
MDKGAGLNLVHFKLLSLGWEDFVQSSKTLRTTDASRTPIDIKGKVPLYIQ
LGQFKVRAWFLVCPNLSVKAILGTSFIDQDIKAIYPGLWKVAFYHAPSIS
ITGSTPGPGANHNRAVVSENTKSNRIRLSKTITIPPLTQLAVSVHSQFSG
LVTIQNHPKTDLKHFTLMASGVMDIRFIRPFLVTISNFRDKPVLLLQGKV
IDITLNAFVAIMEAQIYNFATPTPNEHVESWEGRVAIGAECESYRPQVLD
LLKEYQAMWSGRLGKIRANAHRIDLQDDAKPQFQHPYCTGLKGREIVADQ
ADKMRKAQVIEPVPPKQSEWTSPLVLV*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR043502DNA/RNA_pol_sf