Gchil1672.t1 (polypeptide) Gracilaria chilensis NLEC103_M9 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGchil1672.t1
Unique NameGchil1672.t1
Typepolypeptide
OrganismGracilaria chilensis NLEC103_M9 male (Gracilaria chilensis NLEC103_M9 male)
Sequence length171
Homology
BLAST of Gchil1672.t1 vs. uniprot
Match: A0A2V3J6A6_9FLOR (RING-type domain-containing protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J6A6_9FLOR)

HSP 1 Score: 206 bits (524), Expect = 2.530e-65
Identity = 96/170 (56.47%), Postives = 129/170 (75.88%), Query Frame = 0
Query:    1 MELYFQEHDISGDDTRRRSTTRPPIVLRFAASLAELYSTHRQDAEDEHLREQVRAVLAELAQGDPSVSGTPPASEQALRTLPYINVEKNEKGQLSSCPICTEQFELRQVARKLPCAHVFHSDCVIPWLKQHCTCPMCRRELPTDNRQYEEEKKRQRRQAAVSSMQSFMYS 170
            MELYFQEH I  +   +R+ TR   +LRFA++LA L+S   + AE + + E V A+ A+L   +  VSGTPPAS++ +  LPYINV++N  GQL +CPICT+QFEL++ AR+LPC H+FHSDC++PWLKQHCTCPMCR+ELPTD+R+YEEEK R  ++ A S M+S M+S
Sbjct:    1 MELYFQEHGIDREGESQRAATRQSNLLRFASALATLHSA--EGAEPQRMMEHVHALQADLIDTETEVSGTPPASKKVIANLPYINVKRNGSGQLPTCPICTDQFELQEQARQLPCGHIFHSDCIVPWLKQHCTCPMCRKELPTDDREYEEEKTRALQEEAASYMRSQMFS 168          
BLAST of Gchil1672.t1 vs. uniprot
Match: R7QCG2_CHOCR (RING-type domain-containing protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QCG2_CHOCR)

HSP 1 Score: 161 bits (407), Expect = 1.540e-47
Identity = 76/170 (44.71%), Postives = 112/170 (65.88%), Query Frame = 0
Query:    1 MELYFQEHDISGD--DTRRRSTTRPPIVLRFAASLAELYSTHRQDAEDEHLREQVRAVLAELAQGDPSVSGTPPASEQALRTLPYINVEKNEKGQLSSCPICTEQFELRQVARKLPCAHVFHSDCVIPWLKQHCTCPMCRRELPTDNRQYEEEKKRQRRQAAVSSMQSFM 168
            M+LY+QEHD+  +  DT    T+   ++LR A  +A +  +     E E L   V  +LA+++  DPS+ G PPAS +++RTLP +N+     G  SSCPICTE++E  + A++LPC H FH+DCV+PWL+ HCTCP+CR ELPTD+  Y + K+ ++R+ AVS +Q  M
Sbjct:    1 MDLYYQEHDVRPNERDTASTQTSTSTVMLRLALLVARM--SEATGPEHERLAAAVDHLLAQVSDTDPSMPGKPPASAESIRTLPVVNMRPGPSGP-SSCPICTEEYEFNEPAKRLPCGHTFHADCVVPWLRSHCTCPLCRAELPTDDLAYMQRKRLEKRREAVSQLQHHM 167          
BLAST of Gchil1672.t1 vs. uniprot
Match: UPI001E1DB7B7 (E3 ubiquitin-protein ligase RNF181-like n=1 Tax=Mercenaria mercenaria TaxID=6596 RepID=UPI001E1DB7B7)

HSP 1 Score: 150 bits (378), Expect = 5.010e-43
Identity = 78/178 (43.82%), Postives = 109/178 (61.24%), Query Frame = 0
Query:    1 MELYFQEHDISGDDTRRRSTTR----PPIVLRFAASLAELYSTHR-QDAEDEHLREQVRAVLAELAQGDPSVSGTPPASEQALRTLPYINV---EKNEKGQLSSCPICTEQFELRQVARKLPCAHVFHSDCVIPWLKQHCTCPMCRRELPTDNRQYEEEKKRQRRQAAVSSMQSFMYS 170
            M+LYF EH +    T R             L+ AA LA+L  T   +D+E + L    R++LA +   DPS+ GTPPAS+ A+  L  +++     +    L SC +CTE FE  + ARKLPC HVFH DCVIPWL+QHC+CPMCR E+P+ +  YE+ K  ++RQ+AV S++S MY+
Sbjct:    1 MDLYFAEHGVVPGSTSRGGAAELGEGALATLQAAAVLAQLTETAGVEDSETQRLGAVARSLLASVLDQDPSLQGTPPASDDAIAALERVHIVPRAASADADLLSCAVCTEYFERNEPARKLPCGHVFHGDCVIPWLRQHCSCPMCRHEIPSSDPVYEQGKVHRQRQSAVDSLRSSMYN 178          
BLAST of Gchil1672.t1 vs. uniprot
Match: A0A830C0W6_9LAMI (RING-type E3 ubiquitin transferase n=1 Tax=Phtheirospermum japonicum TaxID=374723 RepID=A0A830C0W6_9LAMI)

HSP 1 Score: 112 bits (280), Expect = 3.740e-27
Identity = 46/95 (48.42%), Postives = 71/95 (74.74%), Query Frame = 0
Query:   56 VLAELAQGDPSVSGTPPASEQALRTLPYINVEKN-EKGQLSSCPICTEQFELRQVARKLPCAHVFHSDCVIPWLKQHCTCPMCRRELPTDNRQYE 149
            ++ +LA+ DP+  GTPPAS+ A+  LP INV+++  K +L+ C +C + FEL  V +++PC HV+H+DC++PWL+ H +CP+CR ELPTD+  YE
Sbjct:  136 LIQQLAENDPNRYGTPPASKSAVEALPSINVDEDLMKSELAQCAVCKDDFELGTVVKQMPCKHVYHTDCILPWLELHNSCPVCRHELPTDDPDYE 230          
BLAST of Gchil1672.t1 vs. uniprot
Match: A0A8B8KGI3_ABRPR (RING-type E3 ubiquitin transferase n=1 Tax=Abrus precatorius TaxID=3816 RepID=A0A8B8KGI3_ABRPR)

HSP 1 Score: 110 bits (276), Expect = 1.400e-26
Identity = 47/101 (46.53%), Postives = 73/101 (72.28%), Query Frame = 0
Query:   56 VLAELAQGDPSVSGTPPASEQALRTLPYINV-EKNEKGQLSSCPICTEQFELRQVARKLPCAHVFHSDCVIPWLKQHCTCPMCRRELPTDNRQYEEEKKRQ 155
            ++  LA+ DP+  GTPPAS+ A+  LP I+V E+      S C +C + FELR++A+++PC H++HSDC++PWL+ H +CP+CR ELPTD+ +YE+  + Q
Sbjct:  127 LIQHLAENDPNRYGTPPASKSAIEALPNISVTEELLASDSSQCAVCKDTFELRELAKQMPCKHIYHSDCILPWLELHNSCPVCRFELPTDDPEYEQRNRSQ 227          
BLAST of Gchil1672.t1 vs. uniprot
Match: M4BXL0_HYAAE (RING-type domain-containing protein n=1 Tax=Hyaloperonospora arabidopsidis (strain Emoy2) TaxID=559515 RepID=M4BXL0_HYAAE)

HSP 1 Score: 105 bits (262), Expect = 3.280e-26
Identity = 49/108 (45.37%), Postives = 68/108 (62.96%), Query Frame = 0
Query:   56 VLAELAQGDPSVSGTPPASEQALRTLPYINVEKNEKGQLSSCPICTEQFELRQVARKLPCAHVFHSDCVIPWLKQHCTCPMCRRELPTDNRQYEEEKKRQRRQAAVSS 163
            V+ +L Q DP+  G PPA+++ +  LP + V +NE    + CP+C + F +      LPC H FH DC++PWLKQH +CP+CR ELPTD+  YE      RR+AA SS
Sbjct:   20 VINQLMQHDPNRHGAPPAAKEVVEMLPKVKVTQNEVDGSAECPVCKDLFAVDDEVHCLPCNHSFHPDCIVPWLKQHNSCPLCRFELPTDDPDYE------RRRAASSS 121          
BLAST of Gchil1672.t1 vs. uniprot
Match: UPI00098D8276 (E3 ubiquitin-protein ligase RING1 n=1 Tax=Cajanus cajan TaxID=3821 RepID=UPI00098D8276)

HSP 1 Score: 108 bits (269), Expect = 3.550e-26
Identity = 48/109 (44.04%), Postives = 74/109 (67.89%), Query Frame = 0
Query:   56 VLAELAQGDPSVSGTPPASEQALRTLPYINV-EKNEKGQLSSCPICTEQFELRQVARKLPCAHVFHSDCVIPWLKQHCTCPMCRRELPTDNRQYEEEKKRQRRQAAVSS 163
            ++  LA+ DP+  GTPPAS+ A+  LP I + E+      S C +C + FELR++A+++PC H++HSDC++PWL+ H +CP+CR ELPTD+  YE+  + Q   A+  S
Sbjct:   54 LIQHLAENDPNRYGTPPASKSAIEGLPNIPITEELLATDSSQCAVCKDTFELRELAKQMPCKHIYHSDCILPWLELHNSCPVCRYELPTDDPDYEQRARGQSTAASADS 162          
BLAST of Gchil1672.t1 vs. uniprot
Match: A0A5J4YYZ4_PORPP (E3 ubiquitin-protein ligase n=1 Tax=Porphyridium purpureum TaxID=35688 RepID=A0A5J4YYZ4_PORPP)

HSP 1 Score: 107 bits (266), Expect = 3.930e-26
Identity = 66/185 (35.68%), Postives = 101/185 (54.59%), Query Frame = 0
Query:    1 MELYFQEHDISGDDTRRRSTTRPPIVLRFAAS----LAELYSTHRQDAEDEHLREQVRAVLAELAQGDPSVSGT----------PPASEQALRTLPYIN-VEKNEKGQLSSCPICTEQFELRQVARKLPCAHVFHSDCVIPWLKQHCTCPMCRRELPTDNRQYEEEKKRQRRQAAVSSMQSFMYS 170
            M  YF +HD++  D    S +RP      A +    LAE ++     ++D  +R +   +LAELAQ    ++GT          PPA+E A+  LP +   E        +CP+CT +   +Q   K+PCAH+FH++C++ WL +H +CP CRREL TD+ QYE +K+ + RQ A  +M   MY+
Sbjct:    2 MASYFDDHDVA--DVAMGSGSRPGSAGEQAGAAANQLAEFFALLGSSSDDASIRARTVTLLAELAQ----LAGTHVNLAETLSNPPAAESAIAELPRLAPAELRVVAPAETCPVCTCELA-QQDCLKMPCAHLFHAECLMAWLHRHNSCPCCRRELRTDDIQYENKKRERARQQAAKAMYDSMYN 179          
BLAST of Gchil1672.t1 vs. uniprot
Match: F0WH88_9STRA (RING-type E3 ubiquitin transferase n=1 Tax=Albugo laibachii Nc14 TaxID=890382 RepID=F0WH88_9STRA)

HSP 1 Score: 110 bits (274), Expect = 5.120e-26
Identity = 43/97 (44.33%), Postives = 67/97 (69.07%), Query Frame = 0
Query:   56 VLAELAQGDPSVSGTPPASEQALRTLPYINVEKNEKGQLSSCPICTEQFELRQVARKLPCAHVFHSDCVIPWLKQHCTCPMCRRELPTDNRQYEEEK 152
            V+ +L Q D +  GTPPA+++A+  LP +++ + +    S C +C + F L + AR++PC H FH DC++PWLKQH +CP+CR ELPTD+  YE ++
Sbjct:  208 VINQLMQNDSNRHGTPPAAKEAIEKLPVLSITQEDINTNSECAVCKDDFNLAEEARRMPCTHTFHPDCILPWLKQHNSCPVCRYELPTDDADYERQR 304          
BLAST of Gchil1672.t1 vs. uniprot
Match: A0A371IA32_MUCPR (RING-type E3 ubiquitin transferase (Fragment) n=3 Tax=Phaseoleae TaxID=163735 RepID=A0A371IA32_MUCPR)

HSP 1 Score: 109 bits (273), Expect = 5.270e-26
Identity = 49/112 (43.75%), Postives = 76/112 (67.86%), Query Frame = 0
Query:   56 VLAELAQGDPSVSGTPPASEQALRTLPYINVEKNEKGQLSS-CPICTEQFELRQVARKLPCAHVFHSDCVIPWLKQHCTCPMCRRELPTDNRQYEEEKKRQRRQAAVSSMQS 166
            ++  LA+ DP+  GTPPAS+ A+  LP I++ ++     SS C +C + FELR+VA+++PC H++HSDC++PWL+ H +CP+CR ELPTD+  YE+  + Q       + QS
Sbjct:  139 LIQHLAENDPNRYGTPPASKSAIEGLPNISITEDLLASDSSQCAVCKDTFELREVAKQMPCKHIYHSDCILPWLELHNSCPVCRYELPTDDPDYEQRARGQSTAGDTDTSQS 250          
The following BLAST results are available for this feature:
BLAST of Gchil1672.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2V3J6A6_9FLOR2.530e-6556.47RING-type domain-containing protein n=1 Tax=Gracil... [more]
R7QCG2_CHOCR1.540e-4744.71RING-type domain-containing protein n=1 Tax=Chondr... [more]
UPI001E1DB7B75.010e-4343.82E3 ubiquitin-protein ligase RNF181-like n=1 Tax=Me... [more]
A0A830C0W6_9LAMI3.740e-2748.42RING-type E3 ubiquitin transferase n=1 Tax=Phtheir... [more]
A0A8B8KGI3_ABRPR1.400e-2646.53RING-type E3 ubiquitin transferase n=1 Tax=Abrus p... [more]
M4BXL0_HYAAE3.280e-2645.37RING-type domain-containing protein n=1 Tax=Hyalop... [more]
UPI00098D82763.550e-2644.04E3 ubiquitin-protein ligase RING1 n=1 Tax=Cajanus ... [more]
A0A5J4YYZ4_PORPP3.930e-2635.68E3 ubiquitin-protein ligase n=1 Tax=Porphyridium p... [more]
F0WH88_9STRA5.120e-2644.33RING-type E3 ubiquitin transferase n=1 Tax=Albugo ... [more]
A0A371IA32_MUCPR5.270e-2643.75RING-type E3 ubiquitin transferase (Fragment) n=3 ... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001841Zinc finger, RING-typeSMARTSM00184ring_2coord: 97..137
e-value: 4.2E-5
score: 33.0
IPR001841Zinc finger, RING-typePFAMPF13639zf-RING_2coord: 96..138
e-value: 1.3E-12
score: 47.8
IPR001841Zinc finger, RING-typePROSITEPS50089ZF_RING_2coord: 97..138
score: 12.504031
IPR013083Zinc finger, RING/FYVE/PHD-typeGENE3D3.30.40.10Zinc/RING finger domain, C3HC4 (zinc finger)coord: 61..145
e-value: 1.3E-21
score: 78.1
NoneNo IPR availablePANTHERPTHR15710:SF41OS06G0101300 PROTEINcoord: 57..160
NoneNo IPR availablePANTHERPTHR15710E3 UBIQUITIN-PROTEIN LIGASE PRAJAcoord: 57..160
NoneNo IPR availableCDDcd16454RING-H2_PA-TM-RINGcoord: 97..138
e-value: 6.94088E-23
score: 83.8905
NoneNo IPR availableSUPERFAMILY57850RING/U-boxcoord: 96..144

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00004403_piloncontigtig00004403_pilon:1456365..1456877 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria chilensis NLEC103_M9 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gchil1672.t1Gchil1672.t1Gracilaria chilensis NLEC103_M9 malemRNAtig00004403_pilon 1456365..1456877 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gchil1672.t1 ID=Gchil1672.t1|Name=Gchil1672.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=polypeptide|length=171bp
MELYFQEHDISGDDTRRRSTTRPPIVLRFAASLAELYSTHRQDAEDEHLR
EQVRAVLAELAQGDPSVSGTPPASEQALRTLPYINVEKNEKGQLSSCPIC
TEQFELRQVARKLPCAHVFHSDCVIPWLKQHCTCPMCRRELPTDNRQYEE
EKKRQRRQAAVSSMQSFMYS*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001841Znf_RING
IPR013083Znf_RING/FYVE/PHD