Gchil7491.t1 (polypeptide) Gracilaria chilensis NLEC103_M9 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGchil7491.t1
Unique NameGchil7491.t1
Typepolypeptide
OrganismGracilaria chilensis NLEC103_M9 male (Gracilaria chilensis NLEC103_M9 male)
Sequence length601
Homology
BLAST of Gchil7491.t1 vs. uniprot
Match: A0A2V3J231_9FLOR (Transcriptional corepressor SEUSS n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J231_9FLOR)

HSP 1 Score: 457 bits (1176), Expect = 5.550e-151
Identity = 305/636 (47.96%), Postives = 397/636 (62.42%), Query Frame = 0
Query:    1 MVRRPGPHVTMLLKLNQQLHAATPRHALLKFWKPLFAAHFAPNAAFHIDLKSADAQNLCSFKLPLQLMPNLWKSKYEAGMISERFLLDNPIEHAYSDDSTVVDCPSTLIISNYPQSVVLTDGHLRVWFNPAHKIFRWEFSARAHQELFTPTAFNPPAPPHPHCTEYGVPKNLLELMLVAEAINRLSDKIDNEVNQIVAS----------------NTPAAHSVPHPATSPIGPNSAAPNAANAPSSTPSMSPLDPCALATEITSNEQSTGNAYRAMLSQFGGSQA-LSVDPALSAKQ-MQIPSPSSA-IMPSTLTPNNRTDAARSLLSQVISPEEATANAINNALSWRNDQSQPLHTSEMLTNILEETFRSSLAPDNENMRQRIQRQTLAPTDHLTGQIAELGDAQDGRQSSSAIGAXXXXXXXGQGGWGVDLSSSAKQSFGDALDAQLALQASTL-NASLNLAGITGQKATPMRHAG------NPGLSLFQSQVG-ALDGRKSSTNR----GNRAAANMRAT-GNTLYREFSDVELLKRMS-VKSKQEQQADVRSNGAMGINGSAVFGLTSG-SQGSYSHLSGELVSKLVKDESSMV---GGHGSTASITGKKSRRS-SVADGREKRQKSARGGN 598
            MVR+P  +V  LL+ N QLHAAT    L +FWKPLFAAHFA  AA HI+LK  D+    SF LP+++MP LWKSKYE GMISER LL NPI+H +SD+S VV+CP+TLI+SNY + VVLTDG+ RV FN + KIFRWEF ARAH+ELF   AF P  PP   C++YG+P +L ELMLVAEAI++LSDKID +VN++V+                              SP G  +  PNAA A     +   +    L TEIT+NEQ+TG AYR +LSQ GGSQA  +++ A+SAKQ +Q+ SPS+A I  S + PN R D AR +L   +  + A  NA +N  +WR+D SQ LH  EML N+LEETFRSSLA DN   +Q +Q++T +  DH++ Q+   GDA DGR +      XXXX   GQGGW VD+S+  KQ F D +D +++L A T  + SL++   T  KA  +R         N GLSLF +Q G A+D  KS T+R    GN  A+ +R+  G+ +  + S +++  R   VK+K+E + D R+NG   +NGS   GL SG SQGSYSHLSG++  K  KDE+S+     GH     + GKKSRR  S   GREKR+KS  G N
Sbjct:    1 MVRKPPHYVARLLQFNDQLHAATAADGLFQFWKPLFAAHFATQAAMHIELKCPDSPGHRSFHLPVEVMPRLWKSKYEHGMISERILLHNPIQHEFSDESVVVECPNTLIVSNYARGVVLTDGNFRVSFNSSKKIFRWEFFARAHRELFAAAAFTPTGPPQSTCSKYGIPLSLYELMLVAEAISKLSDKIDQDVNRLVSQAXXXXXXXXXXXXXXXXXXXXXXXXXXXXSPRGTTTDTPNAAIA-----AQWQVAQPTLPTEITTNEQTTGKAYRELLSQIGGSQAPYNMEHAMSAKQQLQMTSPSTAAIQLSAVAPNTRNDGARGVLLHSMGADAAAVNAHSNEFAWRSDASQSLHAPEMLNNLLEETFRSSLAADNS--KQGVQQRTASGNDHVSAQVGGFGDAHDGR-TGXXXXXXXXXVAAGQGGWAVDMST--KQGFNDGMDGRVSLNAMTAADGSLSMGATTMGKANSLRQQADNSGLNNNGLSLFTAQTGTAVD--KSMTSRAALQGN--ASGVRSNIGSGVLHDLSAIDMFSRTKGVKAKREAKGDSRANG---MNGSGGSGLASGGSQGSYSHLSGDIAKKNAKDENSLTKTQSGH-----VGGKKSRRGDSGLSGREKRRKSGSGSN 614          
BLAST of Gchil7491.t1 vs. uniprot
Match: R7QS66_CHOCR (Uncharacterized protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QS66_CHOCR)

HSP 1 Score: 138 bits (348), Expect = 8.600e-31
Identity = 69/194 (35.57%), Postives = 112/194 (57.73%), Query Frame = 0
Query:    6 GPHVTMLLKLNQQLHAATPRHALLKFWKPLFAAHFAPNAAFHIDLKSADAQNLCSFKLPLQLMPNLWKSKYEAGMISERFLLDNPIEHAYSDDSTVVDCPSTLIISNYPQSVVLTDGHLRVWFNPAHKIFRWEFSARAHQELFTPTAFNPPAPPHPHCTEYGVPKNLLELMLVAEAINRLSDKIDNEVNQIVAS 199
            G +V  +++LN+         +    WK L  + F P A  HIDLK  +     S K+P++LMP LWK+K +AG+  ER LL+NP E  Y + +  V CP TLIIS YP   + TDG+LRV F    KI  W+F+ + H E+FT T  +  +   P   + G+P  ++ ++ +A  I++L D++++E+  ++++
Sbjct:  129 GKYVQRIIELNKLRQQGMLEGSYEAHWKTLIPSFFIPEATLHIDLKQNEILVPRSVKVPVELMPRLWKAKVDAGLKEERMLLENPCEFQYPNGAVEVHCPRTLIISAYPDRTIYTDGYLRVTFQGDRKIAVWQFNTKQHTEMFTRTHVHAASNLRPRM-DLGMPVAVVRMLYIATDIHQLKDRMNDEITSLLSN 321          
BLAST of Gchil7491.t1 vs. uniprot
Match: A0A7S0ZB43_9RHOD (Hypothetical protein n=1 Tax=Timspurckia oligopyrenoides TaxID=708627 RepID=A0A7S0ZB43_9RHOD)

HSP 1 Score: 127 bits (318), Expect = 2.330e-27
Identity = 66/187 (35.29%), Postives = 103/187 (55.08%), Query Frame = 0
Query:    6 GPHVTMLLKLNQQLHAATPRHALLKFWKPLFAAHFAPNAAFHIDLKSADAQNLCSFKLPLQLMPNLWKSKYEAGMISERFLLDNPIEHAYSDDSTVVDCPSTLIISNYPQSVVLTDGHLRVWFNPAHKIFRWEFSARAHQELFTPTAFNPPAPPHPH---CTEYGVPKNLLELMLVAEAINRLSDKI 189
            G  V  L+KLN++       ++L  FWKP  A +F P+A   ID+  +      S ++  +L+P +WKSKY+ G+  ER L++NP E    +   VVDCP  LI++ YP S + T+GHLRV F    KI  WEFS R H+EL   ++ +       H      +G+  ++L+ + +AE++N +   I
Sbjct:   89 GECVQRLIKLNEEQRRHITSNSLNDFWKPFVAKYFTPSARMLIDMYDSRLHTPTSVEISAELLPRVWKSKYDLGIKEERLLMENPCEFILQNGIVVVDCPRALILTVYPNSKICTEGHLRVSFEADFKIHCWEFSTRHHEELVVISSND-----EQHKATANSFGMAPDVLQYLRMAESVNAMKPVI 270          
BLAST of Gchil7491.t1 vs. uniprot
Match: A0A068U955_COFCA (Uncharacterized protein n=1 Tax=Coffea canephora TaxID=49390 RepID=A0A068U955_COFCA)

HSP 1 Score: 80.5 bits (197), Expect = 9.420e-13
Identity = 50/165 (30.30%), Postives = 76/165 (46.06%), Query Frame = 0
Query:    1 MVRRPGPHVTMLLKLNQQLHAATPRHALLKFWKPLFAAHFAPNAAFHIDLKSADAQ------------NLCS------FKLPLQLMPNLWKSKYEAGMISERFLLDNPIEHAYSDDSTVVDCPSTLIISNYPQSVVLTDGHLRVWFNPAHKIFRWEFSARAHQEL 147
            +V +PG     L    +Q+    P+   ++FW+   A  F P+    + + S   +            NLC       F +  +++P L+K KYE G I E + L+ PIEH YS + TV+ C      + + Q  V   G LRV F+P  KI  W+F  + H EL
Sbjct:  138 LVSKPGMCALRLANYTRQMQLR-PQDNNIEFWRSFVAEFFLPDVKKRLCVSSYGRKPDRVVDKGEWICNLCKVMPGHGFDITTEILPRLFKVKYENGAIKEHYHLEMPIEHKYSSNQTVLQCEKVTHETVFQQLRVYHVGRLRVAFSPDLKICSWDFCVQHHDEL 301          
BLAST of Gchil7491.t1 vs. uniprot
Match: A0A6P6TFV9_COFAR (transcriptional corepressor SEUSS-like n=2 Tax=Coffea TaxID=13442 RepID=A0A6P6TFV9_COFAR)

HSP 1 Score: 80.5 bits (197), Expect = 3.200e-12
Identity = 50/165 (30.30%), Postives = 76/165 (46.06%), Query Frame = 0
Query:    1 MVRRPGPHVTMLLKLNQQLHAATPRHALLKFWKPLFAAHFAPNAAFHIDLKSADAQ------------NLCS------FKLPLQLMPNLWKSKYEAGMISERFLLDNPIEHAYSDDSTVVDCPSTLIISNYPQSVVLTDGHLRVWFNPAHKIFRWEFSARAHQEL 147
            +V +PG     L    +Q+    P+   ++FW+   A  F P+    + + S   +            NLC       F +  +++P L+K KYE G I E + L+ PIEH YS + TV+ C      + + Q  V   G LRV F+P  KI  W+F  + H EL
Sbjct:  133 LVSKPGMCALRLANYTRQMQLR-PQDNNIEFWRSFVAEFFLPDVKKRLCVSSYGRKPDGVVDKGEWICNLCKVTPGHGFDITTEILPRLFKVKYENGAIKEHYHLEMPIEHKYSSNQTVLQCEKVTHETVFQQLRVYHVGRLRVAFSPDLKICSWDFCVQHHDEL 296          
BLAST of Gchil7491.t1 vs. uniprot
Match: A0A1J7FN68_LUPAN (Uncharacterized protein n=1 Tax=Lupinus angustifolius TaxID=3871 RepID=A0A1J7FN68_LUPAN)

HSP 1 Score: 80.1 bits (196), Expect = 6.080e-12
Identity = 58/206 (28.16%), Postives = 90/206 (43.69%), Query Frame = 0
Query:   15 LNQQLHAATPRHALLKFWKPLFAAHFAPNA-----------------AFHIDLKSADAQNLCS----FKLPLQLMPNLWKSKYEAGMISERFLLDNPIEHAYSDDSTVVDCPSTLIISNYPQSVVLTDGHLRVWFNPAHKIFRWEFSARAHQELFTPTAFNPPAPPHPHCTEYGVPKNLLELMLVAEAINRLSDKIDNEVNQIVAS 199
            ++QQ H   P    ++FW+   A +FAPNA                  F  D++     N C     F+ P +++P L+K KYE+G + E   +D P EH  S    VVD    +  S + +  V+ +G LR+ F+P  KI  WEF AR H++L    +  P        ++ G      +    +   N    ++ N  N  VAS
Sbjct:  299 MHQQQHR--PEDNNIEFWRKFVAEYFAPNAKKKWCVSMYESGKQTAGVFPQDVRHCAICN-CKPGRGFEAPAEVLPRLFKIKYESGTLQELLYVDMPREHHNSSGHIVVDYAKAIQESVFEKLRVVREGQLRIVFSPDLKICSWEFCARRHEDLIPKDSLIP------QISQLGTAAQKFQSCTQSATSNSSVLELQNNCNMFVAS 495          
BLAST of Gchil7491.t1 vs. uniprot
Match: A0A6A3D6R3_HIBSY (Transcriptional corepressor SEUSS n=1 Tax=Hibiscus syriacus TaxID=106335 RepID=A0A6A3D6R3_HIBSY)

HSP 1 Score: 79.7 bits (195), Expect = 8.410e-12
Identity = 61/222 (27.48%), Postives = 97/222 (43.69%), Query Frame = 0
Query:   15 LNQQLHAATPRHALLKFWKPLFAAHFAPNAA--FHIDLKSADAQN------------LCS------FKLPLQLMPNLWKSKYEAGMISERFLLDNPIEHAYSDDSTVVDCPSTLIISNYPQSVVLTDGHLRVWFNPAHKIFRWEFSARAHQELFTPTAFNPPAPPHPHCTEYGVPKNLLELMLVAEAINRLSDKIDNEVNQIVASNTPAAHSVPHPATSPIG 216
            + QQ H   P    ++FW+   A +FAPNA   + + L  +  Q             +C+      F+   +++P L+K KYE+G I E   +D P E+  S    V+D    +  S + Q  V+ DG LR+ F+P  KI  WEF AR H+EL       P        +++G      +      + N  +  + N  N  VAS    A ++  P  + +G
Sbjct:  331 MYQQQHR--PEDNNVEFWRKFVAEYFAPNAKKKWCVSLYGSGRQTTGVFPQGVWHCEICNRKPGRGFEATAEVLPRLFKIKYESGTIEELLYVDMPREYQNSSGQIVLDYAKAIQESVFEQLRVVRDGQLRIVFSPDLKICSWEFCARRHEELIPRRLLIP------QVSQHGAAAQKYQAATQNASTNLSAPDLQNNCNLFVASARQLAKALEVPLVNDLG 544          
BLAST of Gchil7491.t1 vs. uniprot
Match: A0A2C9WEU2_MANES (Uncharacterized protein n=3 Tax=Crotonoideae TaxID=235631 RepID=A0A2C9WEU2_MANES)

HSP 1 Score: 79.7 bits (195), Expect = 8.440e-12
Identity = 59/222 (26.58%), Postives = 98/222 (44.14%), Query Frame = 0
Query:   15 LNQQLHAATPRHALLKFWKPLFAAHFAPNAA--FHIDLKSADAQN------------LCS------FKLPLQLMPNLWKSKYEAGMISERFLLDNPIEHAYSDDSTVVDCPSTLIISNYPQSVVLTDGHLRVWFNPAHKIFRWEFSARAHQELFTPTAFNPPAPPHPHCTEYGVPKNLLELMLVAEAINRLSDKIDNEVNQIVASNTPAAHSVPHPATSPIG 216
            + QQ H   P    ++FW+   A +FAP+A   + + +  +  Q             +C+      F+  ++++P L+K KYE+G + E   +D P EH  S    V+D    +  S + Q  V+ DG LR+ F+P  KI  WEF AR H+EL       P        ++ G      +      + N  + ++ N  N  VAS    A ++  P  + +G
Sbjct:  347 MYQQQHR--PEDNNIEFWRKFVAEYFAPHAKKKWCVSMYGSGRQTTGVFPQDVWHCEICNRKPGRGFEATVEVLPRLFKIKYESGTLEELLYVDMPHEHQNSSGQIVLDYAKAIQESVFEQLRVVRDGQLRIVFSPDLKICSWEFCARRHEELIPRRLLIP------QVSQLGAAAQKYQAATQNASSNLSAPELQNNCNMFVASARQLAKALEVPLVNDLG 560          
BLAST of Gchil7491.t1 vs. uniprot
Match: A0A1S3E804_CICAR (transcriptional corepressor SEUSS-like n=1 Tax=Cicer arietinum TaxID=3827 RepID=A0A1S3E804_CICAR)

HSP 1 Score: 79.3 bits (194), Expect = 1.100e-11
Identity = 59/222 (26.58%), Postives = 98/222 (44.14%), Query Frame = 0
Query:   15 LNQQLHAATPRHALLKFWKPLFAAHFAPNAA--FHIDLKSADAQN------------LCS------FKLPLQLMPNLWKSKYEAGMISERFLLDNPIEHAYSDDSTVVDCPSTLIISNYPQSVVLTDGHLRVWFNPAHKIFRWEFSARAHQELFTPTAFNPPAPPHPHCTEYGVPKNLLELMLVAEAINRLSDKIDNEVNQIVASNTPAAHSVPHPATSPIG 216
            + QQ H   P    ++FW+   A +FAPNA   + + +  +  Q             +C+      F+  ++++P L+K KYE+G + E   +D P E+  S    V+D    +  S + Q  V+ DG LR+ F+P  KI  WEF AR H+EL       P        ++ G      + +      N  + ++ N  N  VAS    A ++  P  + +G
Sbjct:  338 MYQQQHR--PEDNNIEFWRKFVAEYFAPNAKKKWCVSMYGSGRQTTGVFPQDVWHCEICNRKPGRGFEATVEVLPRLFKIKYESGTLEELLYVDMPREYHNSSGQIVLDYAKAIQESVFEQLRVVRDGQLRIVFSPDLKICSWEFCARRHEELIPRRLLIP------QVSQIGAVAQKYQALTQNATPNTSAPELQNNCNMFVASARQLAKALEVPLVNDLG 551          
BLAST of Gchil7491.t1 vs. uniprot
Match: UPI00125DB0BD (transcriptional corepressor SEUSS-like n=2 Tax=Ipomoea TaxID=4119 RepID=UPI00125DB0BD)

HSP 1 Score: 79.3 bits (194), Expect = 1.110e-11
Identity = 60/223 (26.91%), Postives = 98/223 (43.95%), Query Frame = 0
Query:   15 LNQQLHAATPRHALLKFWKPLFAAHFAPNAA--FHIDLKSADAQN------------LCS------FKLPLQLMPNLWKSKYEAGMISERFLLDNPIEHAYSDDSTVVDCPSTLIISNYPQSVVLTDGHLRVWFNPAHKIFRWEFSARAHQELFTPTAFNPPAPPHPHCTEYGVPKNLLELMLVAEAINRLS-DKIDNEVNQIVASNTPAAHSVPHPATSPIG 216
            + QQ H   P    ++FW+   A +FAPNA   + + +  +  Q             +C+      F+  ++++P L+K KYE+G + E   +D P E+  S    V+D    +  S + Q  V+ DG LR+ F+P  KI  WEF AR H+EL       P        +  G      +      A + +S  ++ N  N  VAS    A ++  P  + +G
Sbjct:  332 MYQQQHR--PEDNNIEFWRKFVAEYFAPNAKKKWCVSMYGSGRQTNGVFPQDVWHCEICNRKPGRGFEATVEVLPRLFKIKYESGTLEELLYVDMPCEYQNSSGQIVLDYAKAIQESVFEQLRVVRDGQLRIVFSPDLKIVSWEFCARRHEELIPRRLLIP------QVSHLGAAAQKYQAATTQNASSNISVPELQNNCNMFVASARQLAKALEVPLVNDLG 546          
The following BLAST results are available for this feature:
BLAST of Gchil7491.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2V3J231_9FLOR5.550e-15147.96Transcriptional corepressor SEUSS n=1 Tax=Gracilar... [more]
R7QS66_CHOCR8.600e-3135.57Uncharacterized protein n=1 Tax=Chondrus crispus T... [more]
A0A7S0ZB43_9RHOD2.330e-2735.29Hypothetical protein n=1 Tax=Timspurckia oligopyre... [more]
A0A068U955_COFCA9.420e-1330.30Uncharacterized protein n=1 Tax=Coffea canephora T... [more]
A0A6P6TFV9_COFAR3.200e-1230.30transcriptional corepressor SEUSS-like n=2 Tax=Cof... [more]
A0A1J7FN68_LUPAN6.080e-1228.16Uncharacterized protein n=1 Tax=Lupinus angustifol... [more]
A0A6A3D6R3_HIBSY8.410e-1227.48Transcriptional corepressor SEUSS n=1 Tax=Hibiscus... [more]
A0A2C9WEU2_MANES8.440e-1226.58Uncharacterized protein n=3 Tax=Crotonoideae TaxID... [more]
A0A1S3E804_CICAR1.100e-1126.58transcriptional corepressor SEUSS-like n=1 Tax=Cic... [more]
UPI00125DB0BD1.110e-1126.91transcriptional corepressor SEUSS-like n=2 Tax=Ipo... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR029005LIM-domain binding protein/SEUSSPFAMPF01803LIM_bindcoord: 12..149
e-value: 1.7E-21
score: 76.9
IPR029005LIM-domain binding protein/SEUSSPANTHERPTHR10378LIM DOMAIN-BINDING PROTEINcoord: 16..153
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 563..600
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 200..235
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 565..579
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 580..594

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000007_piloncontigtig00000007_pilon:1498221..1500023 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria chilensis NLEC103_M9 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gchil7491.t1Gchil7491.t1Gracilaria chilensis NLEC103_M9 malemRNAtig00000007_pilon 1498221..1500023 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gchil7491.t1 ID=Gchil7491.t1|Name=Gchil7491.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=polypeptide|length=601bp
MVRRPGPHVTMLLKLNQQLHAATPRHALLKFWKPLFAAHFAPNAAFHIDL
KSADAQNLCSFKLPLQLMPNLWKSKYEAGMISERFLLDNPIEHAYSDDST
VVDCPSTLIISNYPQSVVLTDGHLRVWFNPAHKIFRWEFSARAHQELFTP
TAFNPPAPPHPHCTEYGVPKNLLELMLVAEAINRLSDKIDNEVNQIVASN
TPAAHSVPHPATSPIGPNSAAPNAANAPSSTPSMSPLDPCALATEITSNE
QSTGNAYRAMLSQFGGSQALSVDPALSAKQMQIPSPSSAIMPSTLTPNNR
TDAARSLLSQVISPEEATANAINNALSWRNDQSQPLHTSEMLTNILEETF
RSSLAPDNENMRQRIQRQTLAPTDHLTGQIAELGDAQDGRQSSSAIGAAA
AAAASGQGGWGVDLSSSAKQSFGDALDAQLALQASTLNASLNLAGITGQK
ATPMRHAGNPGLSLFQSQVGALDGRKSSTNRGNRAAANMRATGNTLYREF
SDVELLKRMSVKSKQEQQADVRSNGAMGINGSAVFGLTSGSQGSYSHLSG
ELVSKLVKDESSMVGGHGSTASITGKKSRRSSVADGREKRQKSARGGNTV
*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR029005LIM-bd/SEUSS