Gchil5660.t1 (polypeptide) Gracilaria chilensis NLEC103_M9 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGchil5660.t1
Unique NameGchil5660.t1
Typepolypeptide
OrganismGracilaria chilensis NLEC103_M9 male (Gracilaria chilensis NLEC103_M9 male)
Sequence length684
Homology
BLAST of Gchil5660.t1 vs. uniprot
Match: A0A2V3IV94_9FLOR (Transcription factor BOA n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IV94_9FLOR)

HSP 1 Score: 204 bits (519), Expect = 3.940e-52
Identity = 159/400 (39.75%), Postives = 206/400 (51.50%), Query Frame = 0
Query:  226 SSAHLALGAFPLALAPSQRVRPHKKRLVWTPELHERFISAVNSVGLRNSVPKMLVSIMNVDGLTTEHVKSHLQKYRNSLKKEAADEVRATNQLNAPPWHLAAPPHRAVCLPQDARMGACGTQRNAAAAPLAADTTGA------HAIAAAAAQRAQPRNPIAKPASPTRKPDTRMRSACQPVASENASLSGSVSAAAAVGGSAPPPVAPKEPEQAPKPAANSSSRAVGVRENDHAENSTADDAHASNKRKMQAAKVEAIMTDSAANSAKDTEMEMIEEKILQLQLRVQKILHRSIRMQRRMEQKQCTAAVSDGGGAPSTESGKQCDGRGEREQRETNMHDGQTESVVAEGEVARVADRDMQELLDEQMVLQRELAAHRVMVSRMKESPSTNNNSHGSGRRD 619
            SS  L++     + APS   RPHKKRLVWTPELHERF+SAVN+VGL N+VPK+LVSIMNV+GLTTEHVKSHLQKYRNSLKKEAADEVR T QL   PW +  P  ++V L Q             +   +A  T G       HA  AA  + A   N                 + C    S N   +   + A              +    PK + +  ++  G   +   E     +                       N+ +D  + M+EE+ILQLQLRVQK++HRSIRMQRRMEQKQ +  V++     +T    Q  G  E ++ E +   G+  S VA GE+   A  +MQ LL+EQMVLQRELAAHR  VS +KE  ++   +   G+ D
Sbjct:  464 SSPGLSVSRGASSSAPSSENRPHKKRLVWTPELHERFVSAVNAVGLANAVPKVLVSIMNVNGLTTEHVKSHLQKYRNSLKKEAADEVRVT-QLTVHPWRVTCPGAQSVALAQSGHTAFAAPAARRSFESMAERTVGEATMVAEHAHKAATGRAAAIANXXXXXXXXXXXXXXXXXAGCATAGSTNNGKTRVRTNA--------------KTNTEPKRSGDEKAQIGGGTADKKKEKPGEGEVXXXXXXXXXXXXXXXXXXXXXXNTDEDRHVGMVEEQILQLQLRVQKLVHRSIRMQRRMEQKQSSEVVNES--IDATNGSVQEGGGTEVDENEISGRKGEIASEVALGELGDSAGAEMQALLNEQMVLQRELAAHRATVSGLKEPGASKKKTQKKGKED 846          
BLAST of Gchil5660.t1 vs. uniprot
Match: M2VX62_GALSU (Myb family transcription factor n=1 Tax=Galdieria sulphuraria TaxID=130081 RepID=M2VX62_GALSU)

HSP 1 Score: 103 bits (257), Expect = 1.800e-19
Identity = 46/72 (63.89%), Postives = 60/72 (83.33%), Query Frame = 0
Query:  249 KKRLVWTPELHERFISAVNSVGLRNSVPKMLVSIMNVDGLTTEHVKSHLQKYRNSLKKEAADEVRATNQLNA 320
            KKRL+WTPELH+RF+ AVN+VG+ N+VPK ++ +MNV+GLT+EHVKSHLQKYRN+LKK AA   R T   ++
Sbjct:  324 KKRLIWTPELHDRFLKAVNAVGVNNAVPKTILYLMNVEGLTSEHVKSHLQKYRNNLKKAAARRQRETGHFHS 395          
BLAST of Gchil5660.t1 vs. uniprot
Match: A0A7S0ZFD0_9RHOD (Hypothetical protein n=1 Tax=Timspurckia oligopyrenoides TaxID=708627 RepID=A0A7S0ZFD0_9RHOD)

HSP 1 Score: 100 bits (248), Expect = 2.660e-18
Identity = 45/82 (54.88%), Postives = 63/82 (76.83%), Query Frame = 0
Query:  248 HKKRLVWTPELHERFISAVNSVGLRNSVPKMLVSIMNVDGLTTEHVKSHLQKYRNSLKKEAADEVRAT---NQLNAPPWHLA 326
            +KKR+VWTPELH+RF+ AV  VG+  + PK L+ +MNV+GLT+EHVKSHLQKYRNSLKK++  +V+ +     + APP  ++
Sbjct:  294 NKKRVVWTPELHDRFVKAVKVVGIHQAAPKTLIQVMNVEGLTSEHVKSHLQKYRNSLKKQSISDVKGSVPSRLVMAPPMQVS 375          
BLAST of Gchil5660.t1 vs. uniprot
Match: A0A7S0BJD0_9RHOD (Hypothetical protein n=2 Tax=Rhodosorus marinus TaxID=101924 RepID=A0A7S0BJD0_9RHOD)

HSP 1 Score: 94.4 bits (233), Expect = 1.560e-16
Identity = 44/73 (60.27%), Postives = 56/73 (76.71%), Query Frame = 0
Query:  238 ALAPSQRVRPHKKRLVWTPELHERFISAVNSVGLRNSVPKMLVSIMNVDGLTTEHVKSHLQKYRNSLKKEAAD 310
            A+  +QR    KKRLVWT +LHERF+ AVN  G+ N+VPK ++ IM+V GLTTEHVKSHLQK+RN+L+K   D
Sbjct:  328 AMENAQRTISIKKRLVWTQDLHERFLRAVNVAGIENAVPKTILEIMDVKGLTTEHVKSHLQKFRNNLRKSKTD 400          
BLAST of Gchil5660.t1 vs. uniprot
Match: A0A5J4YVT4_PORPP (Transcription factor PCL1 n=1 Tax=Porphyridium purpureum TaxID=35688 RepID=A0A5J4YVT4_PORPP)

HSP 1 Score: 93.6 bits (231), Expect = 4.390e-16
Identity = 40/61 (65.57%), Postives = 52/61 (85.25%), Query Frame = 0
Query:  249 KKRLVWTPELHERFISAVNSVGLRNSVPKMLVSIMNVDGLTTEHVKSHLQKYRNSLKKEAA 309
            + RLVWTPELH+RF+ AV  +GL N++P+ ++ +MNVDGLTTEH+KSHLQKYR SLKK+ A
Sbjct:  399 RTRLVWTPELHDRFVQAVRVLGLGNAMPRTILQVMNVDGLTTEHIKSHLQKYRQSLKKQTA 459          
BLAST of Gchil5660.t1 vs. uniprot
Match: A0A7J7IBQ0_9RHOD (HTH myb-type domain-containing protein n=1 Tax=Cyanidiococcus yangmingshanensis TaxID=2690220 RepID=A0A7J7IBQ0_9RHOD)

HSP 1 Score: 92.0 bits (227), Expect = 8.790e-16
Identity = 38/64 (59.38%), Postives = 54/64 (84.38%), Query Frame = 0
Query:  249 KKRLVWTPELHERFISAVNSVGLRNSVPKMLVSIMNVDGLTTEHVKSHLQKYRNSLKKEAADEV 312
            K+RLVWTP+LHERF+ AVN +G+  ++PK+LV++MNV+GLT EHVKSHLQKYR +L++   ++ 
Sbjct:  266 KRRLVWTPQLHERFVKAVNEIGVEQAMPKILVNLMNVEGLTPEHVKSHLQKYRRNLRRAQNEQA 329          
BLAST of Gchil5660.t1 vs. uniprot
Match: UPI0008099D35 (two-component response regulator ARR14-like n=1 Tax=Phaseolus angularis TaxID=3914 RepID=UPI0008099D35)

HSP 1 Score: 87.4 bits (215), Expect = 1.960e-15
Identity = 40/75 (53.33%), Postives = 55/75 (73.33%), Query Frame = 0
Query:  249 KKRLVWTPELHERFISAVNSVGLRNSVPKMLVSIMNVDGLTTEHVKSHLQKYRNSLKK---EAADEVRATNQLNA 320
            K R++WT ELH +F+ AVN +GL N+VPK LV +MN+ GLT  HV SHLQKYRN+LK+   ++A ++   N L+A
Sbjct:  140 KSRIIWTSELHGKFVKAVNQIGLANAVPKKLVELMNIPGLTRNHVGSHLQKYRNTLKRKPQQSATDIPLHNHLHA 214          
BLAST of Gchil5660.t1 vs. uniprot
Match: A0A7S2JMY9_9EUKA (Hypothetical protein n=1 Tax=Cyanoptyche gloeocystis TaxID=77922 RepID=A0A7S2JMY9_9EUKA)

HSP 1 Score: 89.4 bits (220), Expect = 4.660e-15
Identity = 38/64 (59.38%), Postives = 53/64 (82.81%), Query Frame = 0
Query:  248 HKKRLVWTPELHERFISAVNSVGLRNSVPKMLVSIMNVDGLTTEHVKSHLQKYRNSLKKEAADE 311
            +KKRLVWTPELH+RF++AVN +G+  + PK ++ +MN++GLT EHVKSHLQKYR ++KK   +E
Sbjct:  255 NKKRLVWTPELHQRFVAAVNILGVHCAAPKAILQLMNIEGLTAEHVKSHLQKYRINMKKAQQEE 318          
BLAST of Gchil5660.t1 vs. uniprot
Match: A0A7S0G1Q6_9RHOD (Hypothetical protein n=1 Tax=Rhodosorus marinus TaxID=101924 RepID=A0A7S0G1Q6_9RHOD)

HSP 1 Score: 89.0 bits (219), Expect = 4.740e-15
Identity = 40/72 (55.56%), Postives = 53/72 (73.61%), Query Frame = 0
Query:  243 QRVRPHKKRLVWTPELHERFISAVNSVGLRNSVPKMLVSIMNVDGLTTEHVKSHLQKYRNSLKKEAADEVRA 314
            Q  R  KKRL+WT +LH  F+ A+  +G+ N+ PK ++  M + G+TTEHVKSHLQKYRN+LKK+AA E RA
Sbjct:  210 QDARGKKKRLIWTSKLHNCFLEAIRFIGINNAGPKNVLERMKIRGITTEHVKSHLQKYRNNLKKDAAQETRA 281          
BLAST of Gchil5660.t1 vs. uniprot
Match: A0A7S0T1G4_9CHLO (Hypothetical protein (Fragment) n=1 Tax=Mantoniella antarctica TaxID=81844 RepID=A0A7S0T1G4_9CHLO)

HSP 1 Score: 82.4 bits (202), Expect = 6.870e-15
Identity = 37/60 (61.67%), Postives = 50/60 (83.33%), Query Frame = 0
Query:  249 KKRLVWTPELHERFISAVNSVGLRNSVPKMLVSIMNVDGLTTEHVKSHLQKYRNSLKKEA 308
            K RLVWTPELH RF++AVN +G++N+VPK ++ +MNV+G+T E+V SHLQKYR  LK+ A
Sbjct:   10 KARLVWTPELHMRFMNAVNHLGIKNAVPKTILQLMNVEGMTRENVASHLQKYRLYLKRLA 69          
The following BLAST results are available for this feature:
BLAST of Gchil5660.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2V3IV94_9FLOR3.940e-5239.75Transcription factor BOA n=1 Tax=Gracilariopsis ch... [more]
M2VX62_GALSU1.800e-1963.89Myb family transcription factor n=1 Tax=Galdieria ... [more]
A0A7S0ZFD0_9RHOD2.660e-1854.88Hypothetical protein n=1 Tax=Timspurckia oligopyre... [more]
A0A7S0BJD0_9RHOD1.560e-1660.27Hypothetical protein n=2 Tax=Rhodosorus marinus Ta... [more]
A0A5J4YVT4_PORPP4.390e-1665.57Transcription factor PCL1 n=1 Tax=Porphyridium pur... [more]
A0A7J7IBQ0_9RHOD8.790e-1659.38HTH myb-type domain-containing protein n=1 Tax=Cya... [more]
UPI0008099D351.960e-1553.33two-component response regulator ARR14-like n=1 Ta... [more]
A0A7S2JMY9_9EUKA4.660e-1559.38Hypothetical protein n=1 Tax=Cyanoptyche gloeocyst... [more]
A0A7S0G1Q6_9RHOD4.740e-1555.56Hypothetical protein n=1 Tax=Rhodosorus marinus Ta... [more]
A0A7S0T1G4_9CHLO6.870e-1561.67Hypothetical protein (Fragment) n=1 Tax=Mantoniell... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 491..511
NoneNo IPR availableGENE3D1.10.10.60coord: 247..307
e-value: 1.2E-25
score: 91.3
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 367..466
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 598..683
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 447..466
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 65..84
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 397..413
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 520..568
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 147..213
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 616..630
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 542..557
NoneNo IPR availablePANTHERPTHR31442:SF29HOMEODOMAIN-LIKE SUPERFAMILY PROTEINcoord: 165..485
IPR006447Myb domain, plantsTIGRFAMTIGR01557TIGR01557coord: 249..302
e-value: 1.2E-20
score: 71.6
IPR044841Transcription factor LUX/BOA-likePANTHERPTHR31442HOMEODOMAIN-LIKE SUPERFAMILY PROTEIN-RELATEDcoord: 165..485
IPR017930Myb domainPROSITEPS51294HTH_MYBcoord: 246..305
score: 14.127937
IPR009057Homeobox-like domain superfamilySUPERFAMILY46689Homeodomain-likecoord: 247..306

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000015_piloncontigtig00000015_pilon:607478..610270 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria chilensis NLEC103_M9 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gchil5660.t1Gchil5660.t1Gracilaria chilensis NLEC103_M9 malemRNAtig00000015_pilon 607478..610270 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gchil5660.t1 ID=Gchil5660.t1|Name=Gchil5660.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=polypeptide|length=684bp
MGRDDEDEDDDADGDAVAAHSAAAALSVAASSAAAQLSSALRLVPAPLAA
AARVAAATAAGAVSTPLSPDSSSPPLLLPSPPDHDDDPLLELDFSWSHVL
DNLLTDTDYLQLPPDAAATAAASADAVVDAAPHAAAVDPFAAASPPRAPT
AVAASPPEELAREADARRGNRNSRKRRASTSPPPAKRARARPPSSPASPV
KIAPAKSPPTAASAARASASASASVSSAHLALGAFPLALAPSQRVRPHKK
RLVWTPELHERFISAVNSVGLRNSVPKMLVSIMNVDGLTTEHVKSHLQKY
RNSLKKEAADEVRATNQLNAPPWHLAAPPHRAVCLPQDARMGACGTQRNA
AAAPLAADTTGAHAIAAAAAQRAQPRNPIAKPASPTRKPDTRMRSACQPV
ASENASLSGSVSAAAAVGGSAPPPVAPKEPEQAPKPAANSSSRAVGVREN
DHAENSTADDAHASNKRKMQAAKVEAIMTDSAANSAKDTEMEMIEEKILQ
LQLRVQKILHRSIRMQRRMEQKQCTAAVSDGGGAPSTESGKQCDGRGERE
QRETNMHDGQTESVVAEGEVARVADRDMQELLDEQMVLQRELAAHRVMVS
RMKESPSTNNNSHGSGRRDEALRGRARGSEARGSEAQGCEAQGCEAQGCE
AQGSEAEERQSAGVEAKAAVECKQAMPNNLNDG*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR006447Myb_dom_plants
IPR044841LUX/BOA-like
IPR017930Myb_dom
IPR009057Homeobox-like_sf