Gchil7458.t1 (polypeptide) Gracilaria chilensis NLEC103_M9 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGchil7458.t1
Unique NameGchil7458.t1
Typepolypeptide
OrganismGracilaria chilensis NLEC103_M9 male (Gracilaria chilensis NLEC103_M9 male)
Sequence length298
Homology
BLAST of Gchil7458.t1 vs. uniprot
Match: A0A2V3J255_9FLOR (Reticulon-like protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J255_9FLOR)

HSP 1 Score: 393 bits (1010), Expect = 2.960e-135
Identity = 220/304 (72.37%), Postives = 249/304 (81.91%), Query Frame = 0
Query:    1 MPLPPPRAPSFPSFIDQAPTHSTASKTPTTDSSINSS--INDPSSLVNMDPST--PVASLSTPSASE---AIPAVPLPVAPSKSRIRAILLWRDPKITGIIFASHMLFFYLTLIRGNSVLSVCGLLFGLYIAMRLAAQYANKRMGNKFDKYLARPPASTPLFRRDSMMRVVDTIVEEGNEVSEQLRDIIYCNKPVVAIKWMLVGFVIYQAGKWFSIVTICFIDSLALFSVPLLYEKNKKKVDDALAKASDTASRHLESGRRAAADRAVKLRDVAMQKSTPYLEKAPPVARNLAEKMGLTPKKKQ 297
            MP PPPRAP+FPSFIDQ P           DSS+ ++    +PS+ VNMD ST  P A LSTP+AS    +IPAVPLPVA SKSRIRAILLWRDPK+T IIF + MLFFYLTL+RG SVLSVCGLLFGLY+A+RLAA + NK MG KFD YLARP ASTPLFRR+SMMRVVDTIVEEGNE+SEQLRDIIYC+K  +   WM V  +IY AG WFS+V++ F+ SLA+FS+PL YEKNKK+VDDA AKASDTASRHLESGRRAAA++AVKLRD A+QKSTPYLEKAPPVARNLAEKMGLTPKK Q
Sbjct:    1 MPDPPPRAPTFPSFIDQQP-----------DSSLKTASLYAEPSAHVNMDQSTAIPHAGLSTPTASSTSASIPAVPLPVAQSKSRIRAILLWRDPKVTAIIFGADMLFFYLTLVRGFSVLSVCGLLFGLYLALRLAAFHVNKHMGGKFDSYLARPSASTPLFRRESMMRVVDTIVEEGNEISEQLRDIIYCDKMGITAAWMFVALMIYVAGNWFSLVSVFFLASLAVFSLPLAYEKNKKQVDDAFAKASDTASRHLESGRRAAAEQAVKLRDAAVQKSTPYLEKAPPVARNLAEKMGLTPKKMQ 293          
BLAST of Gchil7458.t1 vs. uniprot
Match: R7QUZ9_CHOCR (Reticulon-like protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QUZ9_CHOCR)

HSP 1 Score: 274 bits (701), Expect = 5.670e-89
Identity = 139/248 (56.05%), Postives = 187/248 (75.40%), Query Frame = 0
Query:   48 DPSTPVASLSTPSASEAIPAVPLPVAPSKSRIRAILLWRDPKITGIIFASHMLFFYLTLIRGNSVLSVCGLLFGLYIAMRLAAQYANKRMGNKFDKYLARPPASTPLFRRDSMMRVVDTIVEEGNEVSEQLRDIIYCNKPVVAIKWMLVGFVIYQAGKWFSIVTICFIDSLALFSVPLLYEKNKKKVDDALAKASDTASRHLESGRRAAADRAVKLRDVAMQKSTPYLEKAPPVARNLAEKMGLTPKK 295
            DP+TP A+ +TP     +P VPLPVA SKSR++AI+LWRDPKI+ I+ A+ MLFFYLTL+RG SVLSV G   G Y+ + +     NKR G K + Y+ RP   TPL RR+++ R VDT++EE NEV E++RD++YC+KP + +    V F++Y AG +FS++++  + ++ALF++PL YEKNKK VDDA+A+ASD A++H+E+GR+ A DRAVKLRDVA  KS P LEKAPPVA+NLAEK GLTP K
Sbjct:    3 DPATPSAAATTPE----VPVVPLPVAQSKSRLKAIVLWRDPKISAIVLAACMLFFYLTLVRGLSVLSVIGAFSGAYLILGIIIVNVNKRTGGKLNSYITRPATGTPLLRRETIYRGVDTVIEECNEVGEEIRDVLYCDKPPLTLGCAFVAFLVYIAGNYFSLLSVLLVGTIALFTLPLAYEKNKKTVDDAVARASDAAAKHIETGRKVATDRAVKLRDVAAAKSAPLLEKAPPVAKNLAEKFGLTPVK 246          
BLAST of Gchil7458.t1 vs. uniprot
Match: A0A7S1XD53_9RHOD (Reticulon-like protein n=1 Tax=Compsopogon caeruleus TaxID=31354 RepID=A0A7S1XD53_9RHOD)

HSP 1 Score: 106 bits (264), Expect = 1.650e-23
Identity = 80/254 (31.50%), Postives = 129/254 (50.79%), Query Frame = 0
Query:   50 STPVASLSTPSASEAIPAVPLPVAPSKSR------IRAILLWRDPKITGIIFASHMLFFYLTLIRGNSVLSVCGLLFGLYIAMRLAAQYANKRMGNKFDKYLARPPASTPLF-RRDSMMRVVDTIVEEGNEVSEQLRDIIYCNKPVVAIKWMLVGFVIYQAGKWFSIVTICFIDSLALFSVPLLYEKNKKKVDDALAKASDTASRHLESGRRAAADRAVKLRDVAMQKSTPYLEKAPPVARNLAEKMGLTPKKK 296
            ST V S     +  ++P VPL VA  K+       +R +LLW+D K+TG +FA   LFF+LTL    S L V      LY+   +A    +K +       L      + ++ +R+++ R VD  V   N   ++++  +YC     +I  + V FV  Q GK    + + ++  L +F  P  Y+ N++K+D  + K  + A +  +     +A +  +L+    +KSTPYL+KA P A+ LA K+GLTP KK
Sbjct:    6 STSVGSSMAVVSDSSVPQVPLSVASKKTTSLSSDAVRDLLLWKDVKLTGALFAVGNLFFFLTLWSKYSFLRVFSTAAFLYLVCGVALTNISKLLHRATGTNLLETATPSAIYLKRETLERHVDDFVTVVNAAVDEIKKAVYCVDNKNSIVLIGVFFVSLQVGKIVPDLVLAYLIFLFIFVAPPTYDANREKIDAWVDKLQENAGQTYQRSVELSAKKLGELKTTIAEKSTPYLDKAGPKAQELASKIGLTPSKK 259          
BLAST of Gchil7458.t1 vs. uniprot
Match: A0A1A0HER6_9ASCO (Reticulon-like protein n=1 Tax=Metschnikowia bicuspidata var. bicuspidata NRRL YB-4993 TaxID=869754 RepID=A0A1A0HER6_9ASCO)

HSP 1 Score: 73.2 bits (178), Expect = 2.340e-11
Identity = 55/180 (30.56%), Postives = 89/180 (49.44%), Query Frame = 0
Query:   70 LPVAPSKSRIRAILLWRDPKITGIIFASHMLFFYLTLIRGNSVLSVCGLLFGLYIAMRLAA--QYANKRM-GNKF-DKYLARPPASTPLFRRDSMMRVVDTIVEEGNEVSEQLRDIIYCNKPVVAIKWMLVGFVIYQAGKWFSIVTICFIDSLALFSVPLLYEKNKKKVDDALAKASDTA 245
            LP  PS+S + ++L W+DP  TG +F + +    L L + N V  V  LL   Y+A+  AA  +YA + + G  F  KY+  P      F+      V+  +      +  +   ++Y       +K  LV +++Y+   WFS+  + F   L  FSVP +Y+ NKK VD A+A+ +  A
Sbjct:    7 LPAVPSQSCVCSLLTWKDPVATGKVFGAIVA--ALVLAKVNVVNHVFHLL---YLALFAAAGSEYAGRILTGQGFVQKYIGTPQKRAGAFKES----VLPAVGNAAEALEAEFHRVVYAQNIESTVKAALVSYMMYKLTSWFSVYALVFATVLLAFSVPYVYQTNKKNVDAAVAQYTKMA 177          
BLAST of Gchil7458.t1 vs. uniprot
Match: A0A4V1AEN5_9ASCO (Reticulon-like protein n=2 Tax=Metschnikowia TaxID=27320 RepID=A0A4V1AEN5_9ASCO)

HSP 1 Score: 67.4 bits (163), Expect = 2.770e-9
Identity = 55/177 (31.07%), Postives = 85/177 (48.02%), Query Frame = 0
Query:   74 PSKSRIRAILLWRDPKITGIIFASHMLFFYLTLIRGNSVLSVCGLLFGLYIAMRL---AAQYANKRM-GNKFDKYLARPPASTPLFRRDSMMRVVDTIVEEGNEVSE-QLRDIIYCNKPVVAIKWMLVGFVIYQAGKWFSIVTICFIDSLALFSVPLLYEKNKKKVDDALAKASDTA 245
            PS+S + ++L WRDP  TG +F + +    LT +       V   LF L         AA+YA + + G  F K  A     TP  R D+    V   V +  E  E ++  ++Y       +K     +++Y+   WFS+ T+ F   L  FSVP +Y+ NKK+VD A+A+ +  A
Sbjct:   14 PSQSAVVSLLTWRDPAATGKVFGAIISALILTKVN------VFNHLFHLXXXXXXXAAAAEYAGRVLTGEGFVKKYA----GTPKLRIDTFRNSVLPAVGDAAEALETEVHRVVYAQNIEATLKAAGSSYILYKLTSWFSLYTLIFATVLLAFSVPYVYQSNKKEVDAAVAQYTKLA 180          
BLAST of Gchil7458.t1 vs. uniprot
Match: C4Y7B9_CLAL4 (Reticulon-like protein n=2 Tax=Clavispora lusitaniae TaxID=36911 RepID=C4Y7B9_CLAL4)

HSP 1 Score: 65.1 bits (157), Expect = 1.520e-8
Identity = 53/180 (29.44%), Postives = 91/180 (50.56%), Query Frame = 0
Query:   71 PVAPSKSRIRAILLWRDPKITGIIFASHMLFFYLTLIRGNSVLSVCGLLFGL-YIAM--RLAAQYANKRM-GNKF-DKYLARPPASTPLFRRDSMMRVVDTIVEEGNEVSEQLRDIIYCNKPVVAIKWMLVGFVIYQAGKWFSIVTICFIDSLALFSVPLLYEKNKKKVDDALAKASDTA 245
            P+  S S   ++L W+DP  TG +F +  +   L L++ N    V    F L YI +    AA+YA K + G  F  KY+  P + + +F+      V+  + +      ++L  II+       +K     +++++   WFS+ ++ F   L  FSVPL+Y+ NKK++D A+A+ S  A
Sbjct:    8 PIVQSSSAT-SLLTWKDPVATGKVFGA--IIGALLLVKIN----VANHFFHLAYIGLLAAAAAEYAGKLVTGQGFVTKYVGTPKSHSKVFKES----VLPALADASECAEKRLHKIIFAQDIEATLKAAGAAYILFKLTSWFSVYSLIFTSVLLTFSVPLVYQSNKKEIDAAVAQYSKIA 176          
BLAST of Gchil7458.t1 vs. uniprot
Match: W1QGU5_OGAPD (Reticulon-like protein n=3 Tax=Ogataea TaxID=461281 RepID=W1QGU5_OGAPD)

HSP 1 Score: 63.9 bits (154), Expect = 3.910e-8
Identity = 55/205 (26.83%), Postives = 95/205 (46.34%), Query Frame = 0
Query:   82 ILLWRDPKITGIIFASHMLFFYLTLIRGNSVLSVCGLLFGLYIAMRLAAQYANKRMGNKFDKYLARPPASTPLFRRDSMMRVVDTIVEE-----GNEVSE---QLRDIIYCNKPVVAIKWMLVGFVIYQAGKWFSIVTICFIDSLALFSVPLLYEKNKKKVDDALAKASDTASRHLESGRRAAADRAVKLRDVAMQKSTPYLEKA 278
            +L W+DP ++G +F S  L   L L++  ++LS+   +    +A+    +YA K         LA        FR +    V+    EE      N +     +L++I+Y       +K   V +++Y+   WF++ T+ F  +L  FSVP LY KN+K++DDA+   +  A            D+  +L  +  +K+ P LE A
Sbjct:   20 LLTWKDPSVSGKVFGS--LVGSLLLLKSVNLLSIVFYISAFVLAVSALGEYAGK---------LATGQGFVTRFRPE-YKNVIGRYAEEYASHAANLIKNAELKLQEIVYSKNIESTLKVAGVAYILYKLTSWFTLWTLLFTATLTAFSVPPLYLKNQKQIDDAIVTYTKVAK-----------DKLAELLQLIKEKTGPALENA 201          
BLAST of Gchil7458.t1 vs. uniprot
Match: F4WNR2_ACREC (Reticulon-like protein n=3 Tax=Attini TaxID=143999 RepID=F4WNR2_ACREC)

HSP 1 Score: 62.0 bits (149), Expect = 1.430e-7
Identity = 47/176 (26.70%), Postives = 91/176 (51.70%), Query Frame = 0
Query:   72 VAPSKSRIRAILLWRDPKITGIIFASHM-------LFFYLTLIRGNSVLSVCG-LLFGLYIAMRLAAQYANKRMGNKFDKYLARPPASTPLFRRDSMMRVVDTIVEEGNEVSEQLRDIIYCNKPVVAIKWMLVGFVIYQAGKWFSIVTICFIDSLALFSVPLLYEKNKKKVDDALA 239
            V P  +R+ A++ WRDPK +GI+F + +        F  ++++   S+L++ G ++F +Y  +  A Q  +   G+ F   L     + P    + +  V D  V   N    +LR +      V ++K+ ++ + +   G WF+ +T+  I  +ALF++P +YE N++++D  LA
Sbjct:   13 VLPEHNRVAALIYWRDPKKSGIVFGTILGVLLSLAYFSLISVLAYMSLLALSGTIIFRIYKTVLQAVQKTSD--GHPFKDILDLD-LTLPA---EKVHEVADVAVAHANAAVSELRRLFLVEDFVDSLKFGVLLWCLTYVGSWFNGMTLIIIGVVALFTLPKVYETNQEQIDQNLA 182          
BLAST of Gchil7458.t1 vs. uniprot
Match: A0A0J7L648_LASNI (Multifunctional fusion protein n=1 Tax=Lasius niger TaxID=67767 RepID=A0A0J7L648_LASNI)

HSP 1 Score: 63.2 bits (152), Expect = 1.990e-7
Identity = 46/176 (26.14%), Postives = 89/176 (50.57%), Query Frame = 0
Query:   72 VAPSKSRIRAILLWRDPKITGIIFASHM-------LFFYLTLIRGNSVLSVCG-LLFGLYIAMRLAAQYANKRMGNKFDKYLARPPASTPLFRRDSMMRVVDTIVEEGNEVSEQLRDIIYCNKPVVAIKWMLVGFVIYQAGKWFSIVTICFIDSLALFSVPLLYEKNKKKVDDALA 239
            V P +  + A++ WRDPKI+GI+F + +        F  ++++   S+L + G +LF +Y  +  A Q  +   G+ F   L +          + +  V D  V   N    +LR +      V ++K+ ++ + +   G WF+ +T+  I  +ALF++P +YE N++++D  +A
Sbjct:   14 VLPERGPVAALIYWRDPKISGIVFGTILGVLLSLAYFSLISVLAYLSLLVLSGTVLFRIYKTVLQAVQKTSD--GHPFKDILDQDLT----LAAEKVHEVADVAVAHANAAVSELRRLFLVEDFVDSLKFSVLLWCLTYVGSWFNGMTLIIIGVVALFTLPKVYETNQEQIDQNMA 183          
BLAST of Gchil7458.t1 vs. uniprot
Match: G3B627_CANTC (Reticulon-like protein n=1 Tax=Candida tenuis (strain ATCC 10573 / BCRC 21748 / CBS 615 / JCM 9827 / NBRC 10315 / NRRL Y-1498 / VKM Y-70) TaxID=590646 RepID=G3B627_CANTC)

HSP 1 Score: 60.8 bits (146), Expect = 4.500e-7
Identity = 48/204 (23.53%), Postives = 102/204 (50.00%), Query Frame = 0
Query:   72 VAPSKSR--IRAILLWRDPKITGIIFASHMLFFYLTLIRGNSVLSVCGLLFGLYIAMRLAAQYANKRMGNKFDKYLARPPASTPLFRRDSMMRVVDTIVEEGNEVSEQLRDIIYCNKPVVAIKWMLVGFVIYQAGKWFSIVTICFIDSLALFSVPLLYEKNKKKVDDALAKASDTASRHLESGRRAAADRAVKLRDVAMQKSTP 273
            +AP+ S   +  +L W++P  TG +F S +L   L + +  +++++   L  + +    AA+YA K +    + ++ +   ++  + +     ++  I +  +   +    +IY +     +K   V +V+Y+   WFS+ T+     +  F+ P++Y KNKK++D A+A+ S TA   +    + A D+A    +  ++KS P
Sbjct:    5 IAPTSSNTSLCELLTWQNPIKTGKVFGSLIL--GLVVFKKVNLINIVFHLTYIALLFSAAAEYAGKLVTG--EGFVTKYKPTSKAYAKTVNDTILPAIGKGASYAEDVTNKVIYSHDIETTLKAAGVSYVLYKLTSWFSVFTLLTTALVLAFTFPVVYSKNKKEIDAAVAQFSTTAKAKVGEFSKLAQDKAAPHVENLIKKSGP 204          
The following BLAST results are available for this feature:
BLAST of Gchil7458.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 20
Match NameE-valueIdentityDescription
A0A2V3J255_9FLOR2.960e-13572.37Reticulon-like protein n=1 Tax=Gracilariopsis chor... [more]
R7QUZ9_CHOCR5.670e-8956.05Reticulon-like protein n=1 Tax=Chondrus crispus Ta... [more]
A0A7S1XD53_9RHOD1.650e-2331.50Reticulon-like protein n=1 Tax=Compsopogon caerule... [more]
A0A1A0HER6_9ASCO2.340e-1130.56Reticulon-like protein n=1 Tax=Metschnikowia bicus... [more]
A0A4V1AEN5_9ASCO2.770e-931.07Reticulon-like protein n=2 Tax=Metschnikowia TaxID... [more]
C4Y7B9_CLAL41.520e-829.44Reticulon-like protein n=2 Tax=Clavispora lusitani... [more]
W1QGU5_OGAPD3.910e-826.83Reticulon-like protein n=3 Tax=Ogataea TaxID=46128... [more]
F4WNR2_ACREC1.430e-726.70Reticulon-like protein n=3 Tax=Attini TaxID=143999... [more]
A0A0J7L648_LASNI1.990e-726.14Multifunctional fusion protein n=1 Tax=Lasius nige... [more]
G3B627_CANTC4.500e-723.53Reticulon-like protein n=1 Tax=Candida tenuis (str... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR003388ReticulonPFAMPF02453Reticuloncoord: 81..241
e-value: 3.4E-27
score: 95.3
IPR003388ReticulonPROSITEPS50845RETICULONcoord: 79..297
score: 23.438822
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..41
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 15..41
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 1..89
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 112..130
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 131..180
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 181..200
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 206..227
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 201..205
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 228..297
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 90..106
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 107..111
NoneNo IPR availableTMHMMTMhelixcoord: 104..126
NoneNo IPR availableTMHMMTMhelixcoord: 181..203
NoneNo IPR availableTMHMMTMhelixcoord: 207..226

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000007_piloncontigtig00000007_pilon:1339705..1340598 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria chilensis NLEC103_M9 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gchil7458.t1Gchil7458.t1Gracilaria chilensis NLEC103_M9 malemRNAtig00000007_pilon 1339705..1340598 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gchil7458.t1 ID=Gchil7458.t1|Name=Gchil7458.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=polypeptide|length=298bp
MPLPPPRAPSFPSFIDQAPTHSTASKTPTTDSSINSSINDPSSLVNMDPS
TPVASLSTPSASEAIPAVPLPVAPSKSRIRAILLWRDPKITGIIFASHML
FFYLTLIRGNSVLSVCGLLFGLYIAMRLAAQYANKRMGNKFDKYLARPPA
STPLFRRDSMMRVVDTIVEEGNEVSEQLRDIIYCNKPVVAIKWMLVGFVI
YQAGKWFSIVTICFIDSLALFSVPLLYEKNKKKVDDALAKASDTASRHLE
SGRRAAADRAVKLRDVAMQKSTPYLEKAPPVARNLAEKMGLTPKKKQ*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR003388Reticulon