Gchil9259.t1 (polypeptide) Gracilaria chilensis NLEC103_M9 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGchil9259.t1
Unique NameGchil9259.t1
Typepolypeptide
OrganismGracilaria chilensis NLEC103_M9 male (Gracilaria chilensis NLEC103_M9 male)
Sequence length266
Homology
BLAST of Gchil9259.t1 vs. uniprot
Match: A0A2V3IE76_9FLOR (Zinc finger protein CONSTANS-LIKE 3 n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IE76_9FLOR)

HSP 1 Score: 371 bits (952), Expect = 2.450e-127
Identity = 207/270 (76.67%), Postives = 231/270 (85.56%), Query Frame = 0
Query:    1 MVRNCEMCPEDHAVLATIYCAADACYLCAKCDAVVHNANRLAQRHVRTAVGACEMEGSSIHDESDECLMPDMCSMRQQDDTDALTFEDAADYDFSELGLGRMPGLTGVEEIGAWGEGKLNKNWDVSWEEVVQDGFVHVVPEMEPRTDKTADEA-----VKVESVIVEEKKELRLSVKRGREEQVVDAEXXXXXXXXXXXXX-KEALERFRSKRANRSFAKRVRYECRKQLADSRPRVKGRFVRKVEMALYRKYGNLYREHLHELDSSTAS 264
            MVRNCEMCPEDHAV+AT+YCAADACYLCAKCD  VH+ANRLAQRHVR+AV ACE++GSSIHDESDE ++PD+  +R ++ T  LTFEDAADYDF ELGLGRMPGL GVEEIG WGEGKL KNWD+SWE+VV+DGF HVVP++E R  K  D A     VK+E+ +VE+KKE+R+  KR RE       XXXXXXXXXXXXX KEALERFRSKRANRSFAKRVRYECRKQLADSRPRVKGRFVRKVEMALYRKYGNLYREHLHELDS +AS
Sbjct:    1 MVRNCEMCPEDHAVMATVYCAADACYLCAKCDIEVHSANRLAQRHVRSAVSACELDGSSIHDESDEGIVPDIAHIRHEEST-TLTFEDAADYDFGELGLGRMPGLAGVEEIGIWGEGKLGKNWDLSWEDVVEDGFDHVVPDVESRNQKAEDVAAAVVVVKMEA-LVEDKKEVRIGEKRAREXXXXXXXXXXXXXXXXXXXXXKEALERFRSKRANRSFAKRVRYECRKQLADSRPRVKGRFVRKVEMALYRKYGNLYREHLHELDSGSAS 268          
BLAST of Gchil9259.t1 vs. uniprot
Match: R7QFM0_CHOCR (Uncharacterized protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QFM0_CHOCR)

HSP 1 Score: 119 bits (299), Expect = 4.030e-28
Identity = 71/163 (43.56%), Postives = 100/163 (61.35%), Query Frame = 0
Query:    1 MVRNCEMCPEDHAVLATIYCAADACYLCAKCDAVVHNANRLAQRHVRTAVGACEM-EGSSIHDESDECLMPDMCSMRQQDDTDALT---------------FEDAADYDFS-ELGLG-RMPGLTGVEEIGAW-GEGKLNKNW--DVSWEEVVQDGFVHVVPEM 142
            MVR CE+CPE  A  A +YC ADAC+LC+ CD  VH+ANRLA RHVR AV   +  +GSSI+D+S+  L+PD+  + + + +D  +               FEDAA+YDF  E GLG +MP L  +++   + G   L K++  D+SWE VV +   HVVP++
Sbjct:    1 MVRVCELCPEGKARQAVVYCPADACFLCSACDEEVHSANRLAGRHVRRAVATDDGGDGSSINDDSENALVPDVAELDEGEHSDPSSSEDMLLMSLPIQVPSFEDAAEYDFDFEGGLGGKMPALCAIDDDALFTGTKSLGKSFYGDISWESVVPENIEHVVPDV 163          
BLAST of Gchil9259.t1 vs. uniprot
Match: A0A2V3J5T0_9FLOR (Zinc finger protein CONSTANS-LIKE 1 n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J5T0_9FLOR)

HSP 1 Score: 82.0 bits (201), Expect = 9.040e-15
Identity = 81/273 (29.67%), Postives = 116/273 (42.49%), Query Frame = 0
Query:    7 MCPEDHAVLATIYCAADACYLCAKCDAVVHNANRLAQRHVRTAV-----GACEMEGSSIHDESDECLMPD------------------------MCSMRQQDDTDALTFEDAADYDFSELGLGRMPGLT---GVEEIGAWG--------EGKLNKNWDVSWEEVVQDGFVHVVPEM---EPRTDKTADEAVKVESVIVEEKKELRLSVKRGREEQVVDAEXXXXXXXXXXXXXKEALERFRSKRANRSFAKRVRYECRKQLADSRPRVKGRFV 236
            +C     + A++YC AD+ YLC  CD  +H+AN+L++RH R  +             ++ D S+   +P                         + S+  Q + D LT    A        L +  GL+    V ++  W          G+ ++    S++      F  VVP M   +P+   +A+  V  +S          + +KR R                       ALERFR+KRANRSF KRVRY CRKQLADSRPRVKGRFV
Sbjct:    5 LCASCRTIDASVYCQADSAYLCTICDHSIHSANKLSRRHSRIPIHNNSFSPIAPSTDTLLDHSESSTLPSAETDNLISILPPGVSSNAFSVDDLLDSIVPQPNDDHLTSMAGAYVKKEAETLLQSSGLSLDAMVPQLDVWSGLHQVPQQPGRRSRPPTSSFD------FSAVVPNMPALQPQPTSSAEPVVPTQSEASSTDDSESIMLKRKRHRLA-------------------ALERFRNKRANRSFRKRVRYACRKQLADSRPRVKGRFV 252          
BLAST of Gchil9259.t1 vs. uniprot
Match: A0A1X6P4S3_PORUM (CCT domain-containing protein n=1 Tax=Porphyra umbilicalis TaxID=2786 RepID=A0A1X6P4S3_PORUM)

HSP 1 Score: 79.7 bits (195), Expect = 2.170e-13
Identity = 40/62 (64.52%), Postives = 48/62 (77.42%), Query Frame = 0
Query:  199 ALERFRSKRANRSFAKRVRYECRKQLADSRPRVKGRFVRKVEMALYRKYGNLYREHLHELDS 260
            A+ RFR+KRA RSF K+V Y  RK LAD RPRVKGRFV +  MALY++YG+ YREHL E+ S
Sbjct:  276 AMSRFRAKRARRSFTKKVMYTVRKDLADVRPRVKGRFVSRTHMALYKRYGDSYREHLDEVGS 337          
BLAST of Gchil9259.t1 vs. uniprot
Match: A0A833RC60_9POAL (Uncharacterized protein n=1 Tax=Carex littledalei TaxID=544730 RepID=A0A833RC60_9POAL)

HSP 1 Score: 66.6 bits (161), Expect = 3.980e-9
Identity = 75/255 (29.41%), Postives = 106/255 (41.57%), Query Frame = 0
Query:    2 VRNCEMCPEDHAVLATIYCAADACYLCAKCDAVVHNANRLAQRHVR-------TAVGACEM------EGSSIHDESDECLMPDMCSMRQQDDTDALTFEDAADYDFSELGLGRMPGLTGVEEIGAWGEG---KLNKNWDVSWEEVVQDGFVHVVPEMEPRTDKTADEAVKVESVIVEEKKELRLSVKRGREEQVVDAEXXXXXXXXXXXXXKEALERFRSKRANRSFAKRVRYECRKQLADSRPRVKGRFVRKVE 240
            V  CE+C  + A   ++ C ADA  LCA CDA +H+AN LA RHVR       +AVG+          G+   DE  E    +  +    + T     E+   +   E G G   GL G +    W  G    +    +  W  +    +  V  E       ++ EA  V      EK++   +         VD E                L R+R KR NR F K +RY  RK  A++RPR+KGRFV++ E
Sbjct:   49 VPLCEVCERNPA---SVSCRADAAALCATCDADIHSANPLASRHVRVPVVPFVSAVGSLAKPMPPVGSGTLFGDEESEA---EAATWLLAEPTGEAKQEEVVCFGGEEEGYG---GLFGEDVKKDWDGGANLSVGVGNEFDWGYINTGLYSPVYQEASFTNSGSSSEAGVVPEATPYEKEQTMYAH--------VDREAR--------------LMRYREKRKNRRFQKTIRYASRKAYAETRPRIKGRFVKREE 272          
BLAST of Gchil9259.t1 vs. uniprot
Match: A0A1J3EMP2_NOCCA (Zinc finger protein CONSTANS-LIKE 4 (Fragment) n=1 Tax=Noccaea caerulescens TaxID=107243 RepID=A0A1J3EMP2_NOCCA)

HSP 1 Score: 60.5 bits (145), Expect = 2.130e-8
Identity = 29/46 (63.04%), Postives = 38/46 (82.61%), Query Frame = 0
Query:  197 KEALERFRSKRANRSFAKRVRYECRKQLADSRPRVKGRFVRKVEMA 242
            KE +E++RSKR  R+F KR++YECRK LADSRPR++GRF R  EM+
Sbjct:   46 KERIEKYRSKRNLRNFNKRIKYECRKTLADSRPRIRGRFARNDEMS 91          
BLAST of Gchil9259.t1 vs. uniprot
Match: R7QSJ2_CHOCR (Uncharacterized protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QSJ2_CHOCR)

HSP 1 Score: 64.7 bits (156), Expect = 2.200e-8
Identity = 33/38 (86.84%), Postives = 34/38 (89.47%), Query Frame = 0
Query:  199 ALERFRSKRANRSFAKRVRYECRKQLADSRPRVKGRFV 236
            AL RFR KRANRSF K+VRY CRKQLADSRPRVKGRFV
Sbjct:  282 ALRRFRHKRANRSFRKKVRYACRKQLADSRPRVKGRFV 319          
BLAST of Gchil9259.t1 vs. uniprot
Match: UPI0009F4C85E (zinc finger protein CONSTANS-LIKE 2 n=1 Tax=Dendrobium catenatum TaxID=906689 RepID=UPI0009F4C85E)

HSP 1 Score: 63.2 bits (152), Expect = 5.180e-8
Identity = 69/259 (26.64%), Postives = 108/259 (41.70%), Query Frame = 0
Query:    8 CPEDHAVLATIYCAADACYLCAKCDAVVHNANRLAQRHVRTAV-----GACEMEGSSI---HDESDECLMPDMCSMRQQDDTDALTFEDAADYDFSELGLGRMPGLTGVEEIGAWGEGKLNKNWDVSWEEVVQ---------DGFVHVVPEME--PRTDKTADEAVKVESVIVEEKKELRLSVKRGREE----QVVDAEXXXXXXXXXXXXXKEALERFRSKRANRSFAKRVRYECRKQLADSRPRVKGRFVRKVEMAL 243
            C   H++ +++YC ADA YLC  CD+ +H+AN LA+RH R  +     G   + G S+    +E DE           ++D D        D  F  +        T  EE     EGK  + +D   EE  Q         +GF   +      P T+  +     +E  +V E   + +S  + R      ++                 +  + R+R KR  R F K +RY  RK  A++RPR+KGRF ++ +  L
Sbjct:   24 CDSCHSIPSSVYCRADAAYLCTNCDSSIHSANSLARRHHRVPLLPIPAGGLIVGGISVALPKEEEDE--------EDPEEDQDGFLIGGEVDEYFDLVEFS-----TSCEE-----EGK--EKYDCREEEEKQMLQSSFNVGEGFKGGIDYSAFLPHTESLSS----IEGTVVPENSMISISSSQFRTSKETIELFSGPPIQVPQQFSPMDREARVLRYREKRKTRKFQKIIRYASRKAYAETRPRIKGRFAKRTDAEL 258          
BLAST of Gchil9259.t1 vs. uniprot
Match: M2XTY0_GALSU (Transcription factor n=1 Tax=Galdieria sulphuraria TaxID=130081 RepID=M2XTY0_GALSU)

HSP 1 Score: 62.4 bits (150), Expect = 1.140e-7
Identity = 29/42 (69.05%), Postives = 37/42 (88.10%), Query Frame = 0
Query:  199 ALERFRSKRANRSFAKRVRYECRKQLADSRPRVKGRFVRKVE 240
            ALERFR KR+NR + K++RYECRK+LAD RPR++GRFV+K E
Sbjct:  249 ALERFRQKRSNRCYQKKIRYECRKRLADVRPRIRGRFVKKEE 290          
BLAST of Gchil9259.t1 vs. uniprot
Match: A0A8J5BFK0_ZINOF (Uncharacterized protein n=3 Tax=Zingiber officinale TaxID=94328 RepID=A0A8J5BFK0_ZINOF)

HSP 1 Score: 62.0 bits (149), Expect = 1.210e-7
Identity = 31/47 (65.96%), Postives = 37/47 (78.72%), Query Frame = 0
Query:  197 KEALERFRSKRANRSFAKRVRYECRKQLADSRPRVKGRFVRKVEMAL 243
            KE +ER+RSKR  R+F K++ Y CRK LADSRPRVKGRF RK EM +
Sbjct:  156 KERIERYRSKRNRRNFHKKIAYACRKTLADSRPRVKGRFTRKEEMEI 202          
The following BLAST results are available for this feature:
BLAST of Gchil9259.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2V3IE76_9FLOR2.450e-12776.67Zinc finger protein CONSTANS-LIKE 3 n=1 Tax=Gracil... [more]
R7QFM0_CHOCR4.030e-2843.56Uncharacterized protein n=1 Tax=Chondrus crispus T... [more]
A0A2V3J5T0_9FLOR9.040e-1529.67Zinc finger protein CONSTANS-LIKE 1 n=1 Tax=Gracil... [more]
A0A1X6P4S3_PORUM2.170e-1364.52CCT domain-containing protein n=1 Tax=Porphyra umb... [more]
A0A833RC60_9POAL3.980e-929.41Uncharacterized protein n=1 Tax=Carex littledalei ... [more]
A0A1J3EMP2_NOCCA2.130e-863.04Zinc finger protein CONSTANS-LIKE 4 (Fragment) n=1... [more]
R7QSJ2_CHOCR2.200e-886.84Uncharacterized protein n=1 Tax=Chondrus crispus T... [more]
UPI0009F4C85E5.180e-826.64zinc finger protein CONSTANS-LIKE 2 n=1 Tax=Dendro... [more]
M2XTY0_GALSU1.140e-769.05Transcription factor n=1 Tax=Galdieria sulphuraria... [more]
A0A8J5BFK0_ZINOF1.210e-765.96Uncharacterized protein n=3 Tax=Zingiber officinal... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR010402CCT domainPFAMPF06203CCTcoord: 196..238
e-value: 2.5E-18
score: 65.9
IPR010402CCT domainPROSITEPS51017CCTcoord: 196..238
score: 15.50713
NoneNo IPR availablePANTHERPTHR31717ZINC FINGER PROTEIN CONSTANS-LIKE 10coord: 4..243
NoneNo IPR availableCDDcd19821Bbox1_BBX-likecoord: 5..47
e-value: 8.66429E-12
score: 56.5371
IPR000315B-box-type zinc fingerPROSITEPS50119ZF_BBOXcoord: 3..50
score: 9.114944
IPR001289Nuclear transcription factor Y subunit APROSITEPS51152NFYA_HAP2_2coord: 174..238
score: 9.546591

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00004370_piloncontigtig00004370_pilon:2890848..2891645 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria chilensis NLEC103_M9 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gchil9259.t1Gchil9259.t1Gracilaria chilensis NLEC103_M9 malemRNAtig00004370_pilon 2890848..2891645 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gchil9259.t1 ID=Gchil9259.t1|Name=Gchil9259.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=polypeptide|length=266bp
MVRNCEMCPEDHAVLATIYCAADACYLCAKCDAVVHNANRLAQRHVRTAV
GACEMEGSSIHDESDECLMPDMCSMRQQDDTDALTFEDAADYDFSELGLG
RMPGLTGVEEIGAWGEGKLNKNWDVSWEEVVQDGFVHVVPEMEPRTDKTA
DEAVKVESVIVEEKKELRLSVKRGREEQVVDAEEEQMVLERRRKRRKEAL
ERFRSKRANRSFAKRVRYECRKQLADSRPRVKGRFVRKVEMALYRKYGNL
YREHLHELDSSTASC*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR010402CCT_domain
IPR000315Znf_B-box
IPR001289NFYA