Gchil8867.t1 (polypeptide) Gracilaria chilensis NLEC103_M9 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGchil8867.t1
Unique NameGchil8867.t1
Typepolypeptide
OrganismGracilaria chilensis NLEC103_M9 male (Gracilaria chilensis NLEC103_M9 male)
Sequence length220
Homology
BLAST of Gchil8867.t1 vs. uniprot
Match: A0A2V3JA98_9FLOR (DNA replication complex GINS protein PSF3 n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3JA98_9FLOR)

HSP 1 Score: 301 bits (770), Expect = 3.790e-101
Identity = 141/221 (63.80%), Postives = 174/221 (78.73%), Query Frame = 0
Query:    1 MEDYFSIDDILAGDHRIFTTFRHQGYNIGYLDPMGVTEWNASHRAPEELEDNPNIDKDMPKGMRVALPFWLAESLISRNFVNIELPRCYGKQAMQSLRVDTCSVNLAAKCGTYFALGVRLAKLVV--DVALPGALARAFAARCWGITDSAAFSGDRGAQAMRGLDWLECDLFQEAHAMAVATRRWKERRGDRISALDSVLGKRPREELGSPISPSTRPRTS 219
            MEDYFSIDDILAG+H I TTF  QG+ +G+LDP  V +WNA++  P++ +++P++D+ MPKGM VALP+WLAE+L +RNF  ++LPRCYGK   Q+LR D  SV+L +KC  Y+ALGVRLA+L+V  DV  PG L RAFAARCW I D A FSGDRGA AM+G D LECDLF + H +AVATRRWKERRGDRIS   +   KRPREE+GSP++PSTRPRTS
Sbjct:    1 MEDYFSIDDILAGNHCISTTFEEQGFLLGHLDPENVMDWNANNCNPDDYDNDPDLDRHMPKGMTVALPYWLAEALAARNFAKVQLPRCYGKSTRQALRADARSVDLRSKCDNYYALGVRLARLLVGDDVTFPGVLLRAFAARCWSIADMAVFSGDRGAHAMKGFDLLECDLFCDIHGIAVATRRWKERRGDRISGSGAHFRKRPREEIGSPVTPSTRPRTS 221          
BLAST of Gchil8867.t1 vs. uniprot
Match: R7Q771_CHOCR (DNA replication complex GINS protein psf3 n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7Q771_CHOCR)

HSP 1 Score: 206 bits (525), Expect = 5.260e-64
Identity = 110/217 (50.69%), Postives = 141/217 (64.98%), Query Frame = 0
Query:    1 MEDYFSIDDILAGDHRIFTTFRHQGYNIGYLDPMGVTE-WNASHRAPEELEDNPNIDK-DMPKGMRVALPFWLAESLISRNFVNIELPRCYGKQAMQSLRVDTCSVNLAAKCGTYFALGVRLAKLVVDVALPGALARAFAARCWGITDSAAFSGDRGAQAMRGLDWLECDLFQEAHAMAVATRRWKERRGDRISALDSVLGKRPREE-LGSPISPST 214
            MEDYFSIDDIL+ + RI+ TF  Q + + +LDP G    W+++ ++  E       D+ D+P G R+ALPFWLA+SL  R    +ELPRC+   A  +LR D  +V L  +C  ++ALG+R+AKLV D  L  AL RAFA RCWGI DSA F+G RG  A+ GL+  E  LF  AH + +A RRWKERR DRI     VLGKR REE  GSP++PST
Sbjct:    1 MEDYFSIDDILSSEPRIYATFHVQAHQLAHLDPAGAAAVWSSNKQSSAE-------DRLDLPSGHRLALPFWLADSLAQRGVAALELPRCFATGARHALRADARAVRLQTRCPAFYALGLRIAKLVRDSRLSEALVRAFADRCWGIVDSAVFAGARGVAALEGLEEKERKLFFAAHGLDIALRRWKERRIDRIGMAHGVLGKRCREEGPGSPVTPST 210          
BLAST of Gchil8867.t1 vs. uniprot
Match: A0A0L0HMZ2_SPIPD (DNA replication complex GINS protein PSF3 n=2 Tax=Spizellomyces TaxID=4815 RepID=A0A0L0HMZ2_SPIPD)

HSP 1 Score: 102 bits (254), Expect = 1.260e-23
Identity = 60/203 (29.56%), Postives = 99/203 (48.77%), Query Frame = 0
Query:    2 EDYFSIDDILAGDHRIFTTFRHQGYNIGYLDPMGVTEWNASHRAPEELEDNPNIDKDMPKGMRVALPFWLAESLISRNFVNIELPRCYGKQAMQSLRVDTCSVNLAAKCGTYFALGVRLAKLVVDVALPGALARAFAARC---WGITDSAAFSGDRGAQAMRGLDWLECDLFQEAHAMAVATRRWKERRGDRISALDSVLGKR 201
            ++Y+ +D ILA   ++ + FR      G+L+                     N+D D+    R+ LP+WLAE L   +++++ELP+C+G +    L     SVNL + C  Y+  GV++  LVVD  LP  LA AF AR       T ++    DR ++ +  LD  E +L++  H    A  +W +R+  RI   + +  +R
Sbjct:    3 DEYWDLDAILAEQQKLPSFFRMDVPGYGFLEG--------------------NLDVDLAANTRIELPYWLAEHLALNDYIDLELPKCFGHRVRNDLNASPTSVNLGSLCSYYYRFGVKIINLVVDAMLPDILADAFIARLPLIMDYTQTSRLRTDR-SEFIYSLDETEKELYKTGHESVTAMAQWDQRKAVRIHTAEVLRRER 184          
BLAST of Gchil8867.t1 vs. uniprot
Match: A0A1X6NKH3_PORUM (Uncharacterized protein (Fragment) n=1 Tax=Porphyra umbilicalis TaxID=2786 RepID=A0A1X6NKH3_PORUM)

HSP 1 Score: 97.8 bits (242), Expect = 1.660e-21
Identity = 68/217 (31.34%), Postives = 95/217 (43.78%), Query Frame = 0
Query:    2 EDYFSIDDILAGDHRIFTTFRHQGYNIGYLDPMGV--TEWNASHRAPEELEDNPNIDKDMPKGMRVALPFWLAESLISRNFVNIELPRCYGKQAMQSLRVDTCSVNLAAKCGTYFALGVRLAKLVV-DVALPGALARAFAARCWGITDSAAFSGDR------------------------GAQAMRGLDWLECDLFQEAHAMAVATRRWKERRGDRI 191
            +DYF ID ILA    +F  F      + YLDP     +    +   P      P +   +P G+RV LP+WLAE+L  R+ V +ELPR Y  +A   L  D   V LA +   Y+  G RL  L+  +  L   LA ++AAR W I D+A ++                           G   +  LD  E DL+  A   A+A   W+   GDR+
Sbjct:    5 DDYFDIDAILATSDPVFCAFSVAADGLAYLDPASALASTLTPTSGLPTASAAVP-LTNTLPAGLRVGLPYWLAETLAERSLVTLELPRPYDGRARAELIADAPHVALADRASHYYRWGARLGGLLDGEAGLAPLLAASWAARAWRIVDAATYAASXXXXXXXXXXXXXXXXXXXXXXXXGGDGLLPKLDADERDLYFAARGAALAAAEWRRGAGDRV 220          
BLAST of Gchil8867.t1 vs. uniprot
Match: A0A0L0DJQ1_THETB (DNA replication complex GINS protein PSF3 n=1 Tax=Thecamonas trahens ATCC 50062 TaxID=461836 RepID=A0A0L0DJQ1_THETB)

HSP 1 Score: 94.0 bits (232), Expect = 2.480e-20
Identity = 67/205 (32.68%), Postives = 95/205 (46.34%), Query Frame = 0
Query:    4 YFSIDDILAGDHRIFTTFRHQGYNIGYLDPMGVTEWNASHRAPEELEDNPNIDKDMPKGMRVALPFWLAESLISRNFVNIELPRCYGKQAMQSLRVDTCSVNLAAKCGTYFALGVRLAKLVVDVALPGALARAFAARCWGITDSAAFSGDRG-AQAMRGLDWLECDLFQEAHAMAVATRRWKERRGDRISALDSVLGKRPREELG 207
            Y+ ID IL  D  +   F     ++G LDP                  +P+ID+    G    +P WLA SL  R+ V +  P  +G+     L  D   +N+  KC  ++ LGV+LAKL  + ALP  L +AF  R   I D++   G    ++ +R L   E +LF   HA A    R+K R  DR++A   V  KR R  LG
Sbjct:    3 YYDIDAILLDDQIVPAHFNTAAMDLGVLDPS---------------TPSPHIDQ----GTETDIPLWLALSLAKRSIVTLRSPSFFGESFQAHLLADAQVLNIHDKCPFFYELGVKLAKLTGNWALPAVLKKAFHTRYLRIVDTSINLGAADYSEHIRKLTTAERNLFHLGHAAAAEVLRYKTRDTDRLAASAVVTRKRRRAALG 188          
BLAST of Gchil8867.t1 vs. uniprot
Match: A0A507CUX0_9FUNG (DNA replication complex GINS protein PSF3 n=1 Tax=Synchytrium endobioticum TaxID=286115 RepID=A0A507CUX0_9FUNG)

HSP 1 Score: 79.0 bits (193), Expect = 1.240e-14
Identity = 60/206 (29.13%), Postives = 87/206 (42.23%), Query Frame = 0
Query:    3 DYFSIDDILAGDHRIFTTFRHQGYNIGYLDPMGVTEWNASHRAPEELEDNPNIDKDMPKGMRVALPFWLAESLISRNFVNIELPRCYGKQAMQSLRVDTCSVNLAAKCGTYFALGVRLAKLVVDVALPGALARAFAARCWGI---TDSAAFSGDRGAQAMRGLDWLECDLFQEAHAMAVATRRWKERRGD--RISALDSVLGKRPR 203
            DY+ I+ ILA   R+   F +     G+LD                     N D D+P   RV LP+W+AE+L  R +V I+LP+ Y  +    L+     VNL   C  ++  G+R+  L+VD  L   L+  F  R   I   T +     DR +  ++ LD  E DL++          RW   R    RI   D +   R R
Sbjct:    6 DYYDIEAILADQQRVPCFFSYPVPGYGFLDG--------------------NNDADLPPNTRVELPYWMAETLAIREWVEIDLPKYYQVKVRNDLKASPTVVNLYQLCPYFYEFGIRIVNLIVDDVLCKVLSETFTHRVQLIMNYTQATILRTDR-SDFIQSLDETEKDLYRVGVESTGVMIRWIRSRASSARIMTADVLTRDRSR 190          
BLAST of Gchil8867.t1 vs. uniprot
Match: A0A0C3QVW0_9AGAM (DNA replication complex GINS protein PSF3 n=1 Tax=Tulasnella calospora MUT 4182 TaxID=1051891 RepID=A0A0C3QVW0_9AGAM)

HSP 1 Score: 77.0 bits (188), Expect = 6.970e-14
Identity = 57/202 (28.22%), Postives = 91/202 (45.05%), Query Frame = 0
Query:    3 DYFSIDDILAGDHRIFTTFRHQGYNIGYLDPMGVTEWNASHRAPEELEDNPNIDKDMPKGMRVALPFWLAESLISRNFVNIELPRCYGKQAMQSLRVDTCSV---NLAAKCGTYFALGVRLAKLVVDVA---LPGALARAFAARCWGITDSAAF-------------SGDRGAQAMRGLDWLECDLFQEAHAMAVATRRWKE 185
            DY+SID ILA +H+I   F      +GY+D  G  E                  KD+  G ++ LP+WLA +L  +++V++E+P+ +  +  ++L  D  SV   NL    GT++  G  +A L+ +     +   L  AF  R   + D A+              +G+ G +   GLD  E +LF  A      T+ W E
Sbjct:    4 DYYSIDSILAENHKIPCKFEIDVQGLGYID--GGNE------------------KDIKAGTKMLLPYWLAPTLSLQDWVDVEIPQPFSAKVRRALAADARSVKLSNLVGGTGTWYGFGKMMADLLREPQSSEISTTLINAFKLRLIDLMDQASHFGGAASSIGSSGETGEGGGEFREGLDATERELFTLAQGSVQRTKEWYE 185          
BLAST of Gchil8867.t1 vs. uniprot
Match: UPI0006B0BCCB (DNA replication complex GINS protein PSF3-like n=1 Tax=Limulus polyphemus TaxID=6850 RepID=UPI0006B0BCCB)

HSP 1 Score: 73.2 bits (178), Expect = 2.740e-12
Identity = 58/208 (27.88%), Postives = 98/208 (47.12%), Query Frame = 0
Query:    1 MEDYFSIDDILAGDHRIFTTFRHQGYNIGYLDPMGVTEWNASHRAPEELEDNPNIDKDMPKGMRVALPFWLAESLISRNFVNIELPRCYGKQAMQSLRVDTCSVNLAAKCGTYFALGVRLAKL-VVDVA-LPGALARAFAARCWGITDSA--AFSGDRGAQAMRGLDWLECDLFQEAHAMAVATRRWKERRGDRISALDSVLGKRPRE 204
            ME+YFS+DDILA + RI   F+   Y +G L+P        S ++P           D+  G ++ LP WLA++L SR+ VN+ELP+ Y +   + L  D   V+L      ++ +G+ L      D   +   L + F  R   + D++      +  +   R LD LE +LF       +  + W+ R+ ++I     V+  + R+
Sbjct:   18 MEEYFSMDDILATEVRIPCRFQLPVYKLGSLNP--------SSQSP-----------DLLPGTKLELPLWLAQALQSRHIVNVELPKSYRETYREILSADATMVDLHDLGPYFYHIGLYLLNFPYADTEEISKMLTQTFKNRFRKVMDASQHTLQEETSSWTFR-LDMLEVELFNIGQKAFLEFQEWQARKMEKICTSGMVINHKKRK 205          
BLAST of Gchil8867.t1 vs. uniprot
Match: A0A1Y2B726_9TREE (DNA replication complex GINS protein PSF3 n=1 Tax=Naematelia encephala TaxID=71784 RepID=A0A1Y2B726_9TREE)

HSP 1 Score: 68.2 bits (165), Expect = 1.740e-10
Identity = 50/166 (30.12%), Postives = 71/166 (42.77%), Query Frame = 0
Query:    2 EDYFSIDDILAGDHRIFTTFRHQGYNIGYLDPMGVTEWNASHRAPEELEDNPNIDKDMPKGMRVALPFWLAESLISRNFVNIELPRCYGKQAMQSLRVDTCSV---NLAAKCGTYFALGVRLAKLVVDVA---LPGALARAFAARCWGITDSAAFSGDRGAQAMRG 161
            +DYFS+  ILA +H++  TF      +GYL+                       D D+ +  +V +PFWLA++L    F    LP  Y  +   +L     SV   NL  + G ++  G RLA ++ DV    L G L RAF  R   + D AA        A  G
Sbjct:   19 DDYFSLQAILADNHKLSCTFLLDVPGLGYLEG--------------------GSDNDLKENTKVEIPFWLAQTLSLNEFTTFPLPPPYAPRVRSALNASPSSVKLSNLVGQGGWWYRWGRRLADVLDDVPQSELLGMLLRAFVGRLPNLQDLAAHHAGADHSAPEG 164          
BLAST of Gchil8867.t1 vs. uniprot
Match: A0A1Y1U8W3_9TREE (DNA replication complex GINS protein PSF3 n=1 Tax=Kockovaella imperatae TaxID=4999 RepID=A0A1Y1U8W3_9TREE)

HSP 1 Score: 65.5 bits (158), Expect = 1.330e-9
Identity = 57/204 (27.94%), Postives = 89/204 (43.63%), Query Frame = 0
Query:    2 EDYFSIDDILAGDHRIFTTFRHQGYNIGYLDPMGVTEWNASHRAPEELEDNPNIDKDMPKGMRVALPFWLAESLISRNFVNIELPRCYGKQAMQSLRVDTCSVNLAAKCG---TYFALGVRLAKLVVD---VALPGALARAFAARCWGITDSAAF---------SGDRGA-QAMR-GLDWLECDLFQEAHAMAVATRRWKERRG 188
            +DY+S+  ILA +H++  TF      +GYL+  G TE                   D+ +  +V +PFWLA++L    F    LP  Y  +   +L     SV L+   G    ++  G R+A+++ D     L   L  AF AR   + D +A           GD G+ ++ R G++  E DLF      A  T+ W +  G
Sbjct:    3 DDYYSLQSILADNHKLSCTFTLDVPGLGYLE--GSTE------------------PDIHQNSKVEIPFWLAQTLSLNEFTTFPLPPAYSNRVRAALNASAPSVKLSHLVGGGGCWYRWGRRIAEVLDDQPQADLLNMLLNAFLARLPPLQDLSAHIASADHSIPEGDAGSGESFREGMEGDERDLFSVGQDSARITKAWYDSNG 186          
The following BLAST results are available for this feature:
BLAST of Gchil8867.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 19
Match NameE-valueIdentityDescription
A0A2V3JA98_9FLOR3.790e-10163.80DNA replication complex GINS protein PSF3 n=1 Tax=... [more]
R7Q771_CHOCR5.260e-6450.69DNA replication complex GINS protein psf3 n=1 Tax=... [more]
A0A0L0HMZ2_SPIPD1.260e-2329.56DNA replication complex GINS protein PSF3 n=2 Tax=... [more]
A0A1X6NKH3_PORUM1.660e-2131.34Uncharacterized protein (Fragment) n=1 Tax=Porphyr... [more]
A0A0L0DJQ1_THETB2.480e-2032.68DNA replication complex GINS protein PSF3 n=1 Tax=... [more]
A0A507CUX0_9FUNG1.240e-1429.13DNA replication complex GINS protein PSF3 n=1 Tax=... [more]
A0A0C3QVW0_9AGAM6.970e-1428.22DNA replication complex GINS protein PSF3 n=1 Tax=... [more]
UPI0006B0BCCB2.740e-1227.88DNA replication complex GINS protein PSF3-like n=1... [more]
A0A1Y2B726_9TREE1.740e-1030.12DNA replication complex GINS protein PSF3 n=1 Tax=... [more]
A0A1Y1U8W3_9TREE1.330e-927.94DNA replication complex GINS protein PSF3 n=1 Tax=... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR038437GINS complex, subunit Psf3 superfamilyGENE3D1.20.58.2050coord: 1..185
e-value: 4.3E-39
score: 135.9
IPR021151GINS subunit, domain APFAMPF05916Sld5coord: 66..124
e-value: 2.8E-5
score: 24.5
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 200..219
NoneNo IPR availableCDDcd11713GINS_A_psf3coord: 80..186
e-value: 3.64562E-16
score: 69.6023
NoneNo IPR availableSUPERFAMILY160059PriA/YqbF domaincoord: 1..86
IPR010492GINS complex, subunit Psf3PANTHERPTHR22768UNCHARACTERIZEDcoord: 1..203
IPR036224GINS, helical bundle-like domain superfamilySUPERFAMILY158573GINS helical bundle-likecoord: 85..184

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000120_piloncontigtig00000120_pilon:70553..71212 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria chilensis NLEC103_M9 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gchil8867.t1Gchil8867.t1Gracilaria chilensis NLEC103_M9 malemRNAtig00000120_pilon 70553..71212 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gchil8867.t1 ID=Gchil8867.t1|Name=Gchil8867.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=polypeptide|length=220bp
MEDYFSIDDILAGDHRIFTTFRHQGYNIGYLDPMGVTEWNASHRAPEELE
DNPNIDKDMPKGMRVALPFWLAESLISRNFVNIELPRCYGKQAMQSLRVD
TCSVNLAAKCGTYFALGVRLAKLVVDVALPGALARAFAARCWGITDSAAF
SGDRGAQAMRGLDWLECDLFQEAHAMAVATRRWKERRGDRISALDSVLGK
RPREELGSPISPSTRPRTS*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR038437GINS_Psf3_sf
IPR021151GINS_A
IPR010492GINS_Psf3
IPR036224GINS_bundle-like_dom_sf