Gchil7223.t1 (polypeptide) Gracilaria chilensis NLEC103_M9 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	Gchil7223.t1
Unique Name	Gchil7223.t1
Type	polypeptide
Organism	Gracilaria chilensis NLEC103_M9 male (Gracilaria chilensis NLEC103_M9 male)
Sequence length	104

Homology

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BLAST of Gchil7223.t1 vs. uniprot
Match: R7Q3U8_CHOCR (Uncharacterized protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7Q3U8_CHOCR)

HSP 1 Score: 129 bits (325), Expect = 3.730e-37
Identity = 64/91 (70.33%), Postives = 79/91 (86.81%), Query Frame = 0

Query:    1 MVGGSTSSGATAAGFYAAAAASETDGDTFDGDAEFDEYDDWDYAEILSTVSKNVKTYVLQPLVVGAAAAFGMSVGFAIFDATASVFTRKSP 91
            MVG  +SSG+ AAGFY A  ASETDG+TFDG+A+FD+Y++WD+AE+ ST SKNVK Y+ QP VVGAAAAFGMSVG+A+FDATA++FTRK P
Sbjct:    1 MVGAGSSSGSAAAGFYTAMPASETDGETFDGEADFDDYEEWDFAEMFSTASKNVKKYIFQPFVVGAAAAFGMSVGYAMFDATAAMFTRKGP 91

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BLAST of Gchil7223.t1 vs. uniprot
Match: A0A2V3IN90_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IN90_9FLOR)

HSP 1 Score: 125 bits (315), Expect = 1.530e-35
Identity = 63/75 (84.00%), Postives = 71/75 (94.67%), Query Frame = 0

Query:   21 ASETDGDTFDGDAEFDEYDDWDYAEILSTVSKNVKTYVLQPLVVGAAAAFGMSVGFAIFDATASVFTRKSPKVTT 95
            ASETDGDTFDGDAEFDEYDDWDYAE+LS +SKN+KTYVLQPLVVGAAAA GMS+GFAIFDATAS+FTR+S + +T
Sbjct:   21 ASETDGDTFDGDAEFDEYDDWDYAEMLSAMSKNLKTYVLQPLVVGAAAALGMSIGFAIFDATASIFTRRSTRGST 95

The following BLAST results are available for this feature:

BLAST of Gchil7223.t1 vs. uniprot

BLAST of Gchil7223.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2


Match Name	E-value	Identity	Description
R7Q3U8_CHOCR	3.730e-37	70.33	Uncharacterized protein n=1 Tax=Chondrus crispus T...	[more]
A0A2V3IN90_9FLOR	1.530e-35	84.00	Uncharacterized protein n=1 Tax=Gracilariopsis cho...	[more]

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PHOBIUS	NON_CYTOPLASMIC_DOMAIN	Non cytoplasmic domain	coord: 1..56
None	No IPR available	PHOBIUS	TRANSMEMBRANE	Transmembrane region	coord: 57..79
None	No IPR available	PHOBIUS	CYTOPLASMIC_DOMAIN	Cytoplasmic domain	coord: 80..103
None	No IPR available	TMHMM	TMhelix		coord: 57..79

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
tig00004441_pilon	contig	tig00004441_pilon:698448..698941 +

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-06-01
Diamond blastp: OGS1.0 vs UniRef90	2022-06-02
Gracilaria chilensis NLEC103_M9 male OGS1.0	2022-05-09

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
Gchil7223.t1	Gchil7223.t1	Gracilaria chilensis NLEC103_M9 male	mRNA	tig00004441_pilon 698448..698941 +

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>Gchil7223.t1 ID=Gchil7223.t1|Name=Gchil7223.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=polypeptide|length=104bp
MVGGSTSSGATAAGFYAAAAASETDGDTFDGDAEFDEYDDWDYAEILSTV
SKNVKTYVLQPLVVGAAAAFGMSVGFAIFDATASVFTRKSPKVTTQPSLS
KSN*