Gchil6919.t1 (polypeptide) Gracilaria chilensis NLEC103_M9 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGchil6919.t1
Unique NameGchil6919.t1
Typepolypeptide
OrganismGracilaria chilensis NLEC103_M9 male (Gracilaria chilensis NLEC103_M9 male)
Sequence length605
Homology
BLAST of Gchil6919.t1 vs. uniprot
Match: A0A2V3IMM6_9FLOR (Protein aardvark n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IMM6_9FLOR)

HSP 1 Score: 325 bits (834), Expect = 5.170e-100
Identity = 368/551 (66.79%), Postives = 425/551 (77.13%), Query Frame = 0
Query:   42 EKKKRLVKEARKNVTELLEAVEKDKAATPDDHSYTFSQNPLKVFSSADVVTVDKFVMSGGIRSISMAMKKHASSSAVVSSATKTLVAMMFYDPSITENALKAGVIESLITALFAQVDADNEEAKVFTLKALRGFTQDEERRKEIYEGKGLEGIIAIMNRNTDNPRVLSHAALLLSNLAFGNPQIKDATGAMGGIAAICNGMFTHLNHQGMQARGSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXMRKFEKRAQLAVKACAAVRYLSFLPENRDRVCSEGGMEAVVNILKFHSADPKIVEQALLAIGNATFQHDENKTRTGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVYAGSLAMMGFPDNASIQEQASAMLLNITLNAVSLEKVARGDVARLAEKALAMHPKHRGVQLQAGSLWDRLVEYEEGNFSNDTRRGSEHNSGRSG 592
            EKKKRLV+EA+K V+ELLEA+E+DKA + ++  ++FSQNPLK F+SADVVTVDKFV SGG+RSISMAMKKH+SSS VV +A +TLV +MFY  S+ E+A++AG I S+I+A+FAQ D+ +E+AKV  LKALRG TQ EERR +I+E +GL+ ++A + + T++PR+LSHAALLLSNLAFGN +IKDATG MGG                      XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX     +  FEK+ ++  KACAA+RYL FLPENRDRV SE GMEA+V ILK H  +  IVE ALLAIGNATF+H+ENK   G   XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX                              +A  +EKVA+GD ARLAEKAL+MH KHRGVQLQAGSL DRL +Y +G       + +++   RSG
Sbjct:   41 EKKKRLVQEAKKTVSELLEAMERDKALSVNESGFSFSQNPLKAFASADVVTVDKFVASGGLRSISMAMKKHSSSSDVVDTACRTLVTLMFYQSSVVEDAIRAGAIGSIISAIFAQADSGSEDAKVSALKALRGMTQSEERRNDIFEQEGLKAVVAAVQKTTESPRMLSHAALLLSNLAFGNAEIKDATGHMGGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCICQALDTFEKQGKIVGKACAAIRYLCFLPENRDRVRSEKGMEAIVKILKVHCGERSIVENALLAIGNATFEHEENKAAVGRCGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAFSAAVIEKVAQGDAARLAEKALSMHQKHRGVQLQAGSLLDRLEDYMKGTIELGHTQSTDNGGNRSG 591          
BLAST of Gchil6919.t1 vs. uniprot
Match: R7QS92_CHOCR (Aardvark, Armadillo repeat-containing protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QS92_CHOCR)

HSP 1 Score: 158 bits (400), Expect = 5.370e-38
Identity = 305/540 (56.48%), Postives = 358/540 (66.30%), Query Frame = 0
Query:   34 MNDVNELEEKKKRLVKEARKNVTELLEAVEKDKAATPD-DHSYTFSQNPLKVFSSADVVTVDKFVMSGGIRSISMAMKKHASSSAVVSSATKTLVAMMFYDPSITENALKAGVIESLITALFAQVDADNEEAKVFTLKALRGFTQDEERRKEIYEGKGLEGIIAIMNRNTDNPRVLSHAALLLSNLAFGNPQIKDATGAMGGIAAICNGMFTHLNHQGMQARGSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXMRKFEKRAQLAVKACAAVRYLSFLPENRDRVCSEGGMEAVVNILKFHSADPKIVEQALLAIGNATFQHDENKTRTGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVYAGSLAMMGFPDNASIQEQASAMLLNITLNAVSLEKVARGDVARLAEKALAMHPKHRGVQLQAGSLWDRLVEYE 572
            M+  +E + +K+ LV EARK V+  LEAVE  K  T   + S  FS+N LK F+S++ +TV+ F  SGG+RSI + +KKH + S VV      L A+  YD S     +K G I+S+I A+  Q +   ++A V  LK LR  TQ EE R  I++  G+E ++  M  N D PR LSH AL+LSNLAFGN  IK+A G +G                       XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX                    L FL ENRDR+    G+EA++N L+  +    ++E ALLAIGNATF  +E+K   G  XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX                           ++ +  +LE++   DV RLAEKA+ +H KHRGVQLQAG+L DRL  Y+
Sbjct:    1 MDTQSEQQAQKQSLVTEARKMVSLFLEAVETGKQPTKKHESSLAFSKNSLKAFASSESITVEIFRGSGGLRSIVIGVKKHCAESDVVEYGCGALGALTLYDTSTVIELVKVGAIDSIIMAIATQAEGGTDDALVSALKTLRNLTQTEENRTTIFKASGIEAVVKAMAANGDYPRTLSHGALVLSNLAFGNQIIKEAVGNLGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLCFLSENRDRIRELQGIEAIINALRRTNDSSVVLENALLAIGNATFGSEESKAIVGRCXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXMSFSTANLERLEHADVHRLAEKAVNLHTKHRGVQLQAGTLLDRLNGYD 540          
BLAST of Gchil6919.t1 vs. uniprot
Match: A0A1X6NKJ2_PORUM (Uncharacterized protein (Fragment) n=1 Tax=Porphyra umbilicalis TaxID=2786 RepID=A0A1X6NKJ2_PORUM)

HSP 1 Score: 113 bits (282), Expect = 1.690e-22
Identity = 133/498 (26.71%), Postives = 188/498 (37.75%), Query Frame = 0
Query:   78 SQNPLKVFSSADVVTVDKFVMSGGIRSISMAMKKHASSSAVVSSATKTLVAMMFYDPSITENALKAGVIESLITAL--------FAQVDADNEEAKVFTLKALRGFTQDEERRKEIYEGKGLEGIIAIMNRNTDNPRVLSHAALLLSNLAFGNPQIKDATGAMGGIAAICNGMFTHLNHQGMQARGSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXMRKFEK---RAQLAVKACAAVRYLSFLPENRDRVCSEGGMEAVVNILKFHSADPKIVEQALLAIGNATFQHDENKTRTGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVYAGSLAMMGFPDNASIQEQASAMLLNITLNAVSLEKVARGDVARLAEKALAMHPKHRGVQLQAGSL 564
            S N L+ F     +T+DKF  +GG+++I   ++ H +++ V  +A + L+ +  YD +     L A  + +++ ++                       +KA+R  TQ  E R  I +  G+EG++A M     + R+ SH  L+LSNLAFG+   K+  GA                         XXXXXXXXXXXXXXXXXX                                                                                             XXXXXX            +  K CAA+RYL FLP+NRDRV + GG++ +V  L    + PK VE  LLA+GNA F H  N+ R G                                                V     +MM FPD+ SI EQA+A+LL++ L+    + +   D   +  KA+  HPKHRGVQLQ   L
Sbjct:  177 SANVLRAFVGTATMTLDKFRSAGGVKAILAPLRAHPAAAGVTDAACRVLLPLTIYDAATAGEVLAADGVGAILGSVAXXXXXXXXXXXXXXXXXXTTSAIKAVRNLTQTAEHRAAIIDAGGIEGVVAAMGAFHADARLTSHGCLVLSNLAFGSADAKNRVGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVGAAPVIDALVAAIVTHGGGDREVAHQSCVALCNLSNVKEANRAPILAAGGVQAVLKLLAAHPESATVADDAVSILRNVAAAGEDAPLEVGRCXXXXXXXXXXXXXXXHGGVLEKGCAALRYLCFLPDNRDRVATAGGVDLLVAALGGPLSTPKAVESTLLALGNAIFGHARNQERAGMLGAVAATIGVANKHQGGAGVQEHGCRVLRALCEGSDANTAQAVFGGGVSLALGSMMAFPDDPSIAEQATALLLSVGLDPSRRQPLLEADAEGMVTKAMGAHPKHRGVQLQGEQL 674          
The following BLAST results are available for this feature:
BLAST of Gchil6919.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
A0A2V3IMM6_9FLOR5.170e-10066.79Protein aardvark n=1 Tax=Gracilariopsis chorda Tax... [more]
R7QS92_CHOCR5.370e-3856.48Aardvark, Armadillo repeat-containing protein n=1 ... [more]
A0A1X6NKJ2_PORUM1.690e-2226.71Uncharacterized protein (Fragment) n=1 Tax=Porphyr... [more]
back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 30..68
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 11..40
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..40
NoneNo IPR availablePANTHERPTHR22895UNCHARACTERIZEDcoord: 36..153
coord: 363..482
coord: 178..356
coord: 470..561
IPR000225ArmadilloSMARTSM00185arm_5coord: 354..396
e-value: 51.0
score: 7.8
coord: 397..439
e-value: 0.0018
score: 27.5
coord: 265..308
e-value: 25.0
score: 10.2
coord: 441..483
e-value: 3.9
score: 16.4
coord: 310..352
e-value: 0.18
score: 20.9
coord: 178..220
e-value: 3.2
score: 16.7
coord: 133..177
e-value: 440.0
score: 0.5
coord: 222..264
e-value: 78.0
score: 6.3
IPR000225ArmadilloPFAMPF00514Armcoord: 398..437
e-value: 2.4E-5
score: 24.2
IPR000225ArmadilloPROSITEPS50176ARM_REPEATcoord: 408..445
score: 9.1174
IPR000225ArmadilloPROSITEPS50176ARM_REPEATcoord: 277..322
score: 9.4324
IPR000225ArmadilloPROSITEPS50176ARM_REPEATcoord: 189..233
score: 9.712399
IPR000225ArmadilloPROSITEPS50176ARM_REPEATcoord: 452..496
score: 9.0474
IPR011989Armadillo-like helicalGENE3D1.25.10.10coord: 87..245
e-value: 9.1E-15
score: 56.5
IPR011989Armadillo-like helicalGENE3D1.25.10.10coord: 251..585
e-value: 1.6E-43
score: 151.0
IPR016024Armadillo-type foldSUPERFAMILY48371ARM repeatcoord: 115..492

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00004376_piloncontigtig00004376_pilon:690707..692521 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria chilensis NLEC103_M9 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gchil6919.t1Gchil6919.t1Gracilaria chilensis NLEC103_M9 malemRNAtig00004376_pilon 690707..692521 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gchil6919.t1 ID=Gchil6919.t1|Name=Gchil6919.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=polypeptide|length=605bp
MSTEDNSPKNVGGFEESKREKSVLEPTGTEKKAMNDVNELEEKKKRLVKE
ARKNVTELLEAVEKDKAATPDDHSYTFSQNPLKVFSSADVVTVDKFVMSG
GIRSISMAMKKHASSSAVVSSATKTLVAMMFYDPSITENALKAGVIESLI
TALFAQVDADNEEAKVFTLKALRGFTQDEERRKEIYEGKGLEGIIAIMNR
NTDNPRVLSHAALLLSNLAFGNPQIKDATGAMGGIAAICNGMFTHLNHQG
MQARGSLALRNLSYNSELNHKIAGENGAAQALIKTIQQFPNDREVAHQSC
VALVNLSSANEENRKRIVKADGAPLFVKMMRMHPDSVTVNDDCVSIIRNI
SVGNPEGQVELGNCGGVAEVCKVMRKFEKRAQLAVKACAAVRYLSFLPEN
RDRVCSEGGMEAVVNILKFHSADPKIVEQALLAIGNATFQHDENKTRTGK
CGGIVEIIKALEKHRLNSGIQEHGCRVLRNLADNCEFNSALEAENGAVYA
GSLAMMGFPDNASIQEQASAMLLNITLNAVSLEKVARGDVARLAEKALAM
HPKHRGVQLQAGSLWDRLVEYEEGNFSNDTRRGSEHNSGRSGFSIFGKRR
SKHN*
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000225Armadillo
IPR011989ARM-like
IPR016024ARM-type_fold