Gchil6892.t1 (polypeptide) Gracilaria chilensis NLEC103_M9 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	Gchil6892.t1
Unique Name	Gchil6892.t1
Type	polypeptide
Organism	Gracilaria chilensis NLEC103_M9 male (Gracilaria chilensis NLEC103_M9 male)
Sequence length	622

Homology

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BLAST of Gchil6892.t1 vs. uniprot
Match: A0A2V3J3U9_9FLOR (SAM domain-containing protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J3U9_9FLOR)

HSP 1 Score: 322 bits (826), Expect = 1.420e-98
Identity = 268/638 (42.01%), Postives = 350/638 (54.86%), Query Frame = 0

Query:    1 MDYNHQLDCCPSCSTPLTLFTPRERLQHANECLDSEHQKQATHE-PSCXXXXXXXXXXXXXXXXXXXXXXXXVTLSPRPRQRRPVRKRPRSTSATSSRVPRQELHRKKCDAKVVKLLTLLGLERYSQRFADEDIDLDTLRILKDEDFVALRIPDAARRRIADALHAVPILDGLQTPTTTEPANEAHIVPTQKFATSKLGAALQREKSLFDDDDDDFEYRPTQTTPGSANEEP--EKVPSAAALERVPNPRATAAVPETIDLITPTKEDKTGPTAIQPTGQTSDSSDFDFENDMLLQSQISLETKIEKWKEQQTRKEEMRHQDQMAXXXXXXXXXXXXXXXXXXSPAASPQSEPIASIRRSDGTNHMEPTPIDLTTELSHEAECVAEQDLTKKMNNDEDMLRPVSRGGSIERRVDNVSVLDCCSDSDEEFVRQHVLKSPPTGYKSLLPALDFGSESEGLEDLN--QKERLRGNELLFSGNE-DVEATKEGLGRSDDDLLDLFHGSSP----GKLQSSDLERNVA----DRLSLQR--TDSDSSSEELHQTQKTKLKKKRKVTNEEISA-AIRKDKSLYDRILKVESVSYEVILQSIRRSGTAVSRKALTNYLHSEGIMYKGDVTSKSSKAYMKSLNSQF 621
            M++   LD CPSCS P TLF P +   H N C DS   K+ T++ P C   XXXXXXXXXXXXXXXXXXXX   L  RP +R+P     +    T S  PRQ     KCD ++  LL LLGL+RY+QRFADE+IDL  LR+L DEDFV LRIPD ARRRIADALHAVPILDGLQ     EP NE  I+PTQ+FATS+LGA LQR K L++++DDD EY+PTQ   GS    P  +  P   +L  +   +        +D     +++K     +     +SD S+ DFE D+ L+SQISLE KIE W+ +Q R+EE RH   +                   +     Q+ P   +++++         +DLT E   E+  V E      +  +E ++   +      +        +  SDSDEE +R  +LKS              GS  E   DL+  +  +L       +  E  +   KE     ++D++DL    SP    G   S+ L    A     RLS +R  +DSDS+SEE  Q   ++LKKKR  T  EI A AIRKD+ LYDRILKVESV Y  IL S+R+SG  VS+KALT +LH+EGIMYKG+  SK S+ Y+  LNS F
Sbjct:    1 MNHKTFLDACPSCSVPFTLFAPHDIESHINRCFDS---KEKTNDAPICGTCXXXXXXXXXXXXXXXXXXXXDEQLPLRPVKRKPPNSSAQFARPTVSSPPRQ-----KCDEQLTDLLNLLGLQRYTQRFADEEIDLKALRLLTDEDFVRLRIPDPARRRIADALHAVPILDGLQPTDEVEPTNEERIIPTQRFATSRLGAMLQRRKPLYEEEDDD-EYKPTQKPTGSQRHTPTGDSAPDRTSL--MGTTKTYGISQAKLDTAASLRKEKYSSLNLGALSASSDESELDFERDISLKSQISLEMKIENWRRRQLRQEETRHTAVVQRIQNRYQEMVSQLEKEKEN-----QTRPAEVLQKAEFNEQRTTAVVDLTEETVRES--VEETRAAPDICINETVVISSAESDDNAKTARAAKRSNTYSDSDEESLRGMILKS------------HIGSALESDSDLDVFKAPKLSAGWRPGTSRELSLRRQKERAASDEEDMIDLMRERSPQDKSGTNNSALLREPSAGKRISRLSPKRACSDSDSNSEE-GQDAVSRLKKKRTGTGHEIIATAIRKDRDLYDRILKVESVPYSGILNSVRQSGLNVSKKALTTFLHTEGIMYKGEAVSKGSRDYLNKLNSDF 607

The following BLAST results are available for this feature:

BLAST of Gchil6892.t1 vs. uniprot

BLAST of Gchil6892.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1


Match Name	E-value	Identity	Description
A0A2V3J3U9_9FLOR	1.420e-98	42.01	SAM domain-containing protein n=1 Tax=Gracilariops...	[more]

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR013761	Sterile alpha motif/pointed domain superfamily	GENE3D	1.10.150.50		coord: 105..169 e-value: 1.2E-9 score: 39.9
IPR013761	Sterile alpha motif/pointed domain superfamily	SUPERFAMILY	47769	SAM/Pointed domain	coord: 111..166
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 208..232
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 341..365
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 519..541
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 72..101

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
tig00004376_pilon	contig	tig00004376_pilon:608938..610803 +

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-06-01
Diamond blastp: OGS1.0 vs UniRef90	2022-06-02
Gracilaria chilensis NLEC103_M9 male OGS1.0	2022-05-09

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
Gchil6892.t1	Gchil6892.t1	Gracilaria chilensis NLEC103_M9 male	mRNA	tig00004376_pilon 608938..610803 +

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>Gchil6892.t1 ID=Gchil6892.t1|Name=Gchil6892.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=polypeptide|length=622bp
MDYNHQLDCCPSCSTPLTLFTPRERLQHANECLDSEHQKQATHEPSCAIC
SRNLNFLTPAARQEHVNRCLDVTLSPRPRQRRPVRKRPRSTSATSSRVPR
QELHRKKCDAKVVKLLTLLGLERYSQRFADEDIDLDTLRILKDEDFVALR
IPDAARRRIADALHAVPILDGLQTPTTTEPANEAHIVPTQKFATSKLGAA
LQREKSLFDDDDDDFEYRPTQTTPGSANEEPEKVPSAAALERVPNPRATA
AVPETIDLITPTKEDKTGPTAIQPTGQTSDSSDFDFENDMLLQSQISLET
KIEKWKEQQTRKEEMRHQDQMAKIESKYRSMIARLEGKIKSPAASPQSEP
IASIRRSDGTNHMEPTPIDLTTELSHEAECVAEQDLTKKMNNDEDMLRPV
SRGGSIERRVDNVSVLDCCSDSDEEFVRQHVLKSPPTGYKSLLPALDFGS
ESEGLEDLNQKERLRGNELLFSGNEDVEATKEGLGRSDDDLLDLFHGSSP
GKLQSSDLERNVADRLSLQRTDSDSSSEELHQTQKTKLKKKRKVTNEEIS
AAIRKDKSLYDRILKVESVSYEVILQSIRRSGTAVSRKALTNYLHSEGIM
YKGDVTSKSSKAYMKSLNSQF*

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR013761	SAM/pointed_sf