Gchil6799.t1 (polypeptide) Gracilaria chilensis NLEC103_M9 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGchil6799.t1
Unique NameGchil6799.t1
Typepolypeptide
OrganismGracilaria chilensis NLEC103_M9 male (Gracilaria chilensis NLEC103_M9 male)
Sequence length136
Homology
BLAST of Gchil6799.t1 vs. uniprot
Match: A0A2V3J348_9FLOR (39S ribosomal protein L49, mitochondrial n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J348_9FLOR)

HSP 1 Score: 220 bits (560), Expect = 8.100e-72
Identity = 105/131 (80.15%), Postives = 112/131 (85.50%), Query Frame = 0
Query:    5 RVSTRLFSTAAHLHPRPPWTPPSTLKYPLREISREVIKPSGWSPPMGGVERLPFRVFRTPKAKQIPVYTDYKNGRTRCLTVLRRFRGDASELAEEMSRVCDDRPVAVHPGSVQVVGNYRARVEEWLLRLGF 135
            R + RL STAAHL PRPPWTPPSTLKY L++ S +V  PS WSPPMGG E LPFRVFRT K KQIPVYTDYKNGRTRCLTVLRR RGD  ELAEEMSRVCDD+PV + PGS+QVVGNYRARVEEWLLRLGF
Sbjct:    9 RSTHRLLSTAAHLQPRPPWTPPSTLKYTLQDTSNQVRTPSKWSPPMGGFEHLPFRVFRTSKGKQIPVYTDYKNGRTRCLTVLRRIRGDVPELAEEMSRVCDDKPVTIRPGSIQVVGNYRARVEEWLLRLGF 139          
BLAST of Gchil6799.t1 vs. uniprot
Match: A0A7S1TH73_9RHOD (Hypothetical protein n=1 Tax=Compsopogon caeruleus TaxID=31354 RepID=A0A7S1TH73_9RHOD)

HSP 1 Score: 118 bits (295), Expect = 1.640e-31
Identity = 60/128 (46.88%), Postives = 80/128 (62.50%), Query Frame = 0
Query:   23 WTPPSTLKYPLREISREVIKPSGWSPPMGGV-----ERL----------PFRVFRTPKAKQIPVYTDYKNGRTRCLTVLRRFRGDASELAEEMSRVCDDRPVAVHPGSVQVVGNYRARVEEWLLRLGF 135
            W PP  ++YP R+I +EV+  SGW  PMG       ER+          PFR+ RTP +K++PVY DYKNG TR +T++RR RGD   L E+MSR+C  + V V PG ++V GNYR  ++ W  RLGF
Sbjct:   13 WIPPRGVRYPGRDIPKEVVSASGWVAPMGPAPSEVPERVDEPAESSGMPPFRIGRTP-SKELPVYVDYKNGGTRVMTLVRRVRGDVQSLREDMSRICGGKNVTVRPGRLEVKGNYREELKTWFTRLGF 139          
BLAST of Gchil6799.t1 vs. uniprot
Match: M2Y791_GALSU (Uncharacterized protein n=1 Tax=Galdieria sulphuraria TaxID=130081 RepID=M2Y791_GALSU)

HSP 1 Score: 111 bits (277), Expect = 1.490e-28
Identity = 52/113 (46.02%), Postives = 70/113 (61.95%), Query Frame = 0
Query:   23 WTPPSTLKYPLREISREVIKPSGWSPPMGGVERLPFRVFRTPKAKQIPVYTDYKNGRTRCLTVLRRFRGDASELAEEMSRVCDDRPVAVHPGSVQVVGNYRARVEEWLLRLGF 135
            W PP  LKYP+R +    + PSGW PP GG E LPFR +R+     +PVY + K    + +T +RRFRGD   +AEE+ ++C    V    GSV VVG++RA ++ WLL LGF
Sbjct:   49 WIPPPNLKYPVRAVDPSKVTPSGWVPPQGGYENLPFRFYRSSAGNNLPVYLERKR---KTITAVRRFRGDQEAIAEELRKICPGSEVYHCAGSVAVVGDHRAAIQAWLLGLGF 158          
BLAST of Gchil6799.t1 vs. uniprot
Match: A0A484E697_BRELC (Uncharacterized protein n=1 Tax=Bremia lactucae TaxID=4779 RepID=A0A484E697_BRELC)

HSP 1 Score: 103 bits (258), Expect = 9.830e-26
Identity = 49/98 (50.00%), Postives = 69/98 (70.41%), Query Frame = 0
Query:   39 EVIKPSGWSP-PMGGVERLPFRVFRTPKAKQIPVYTDYKNGRTRCLTVLRRFRGDASELAEEMSRVCDDRPVAVHPGSVQVVGNYRARVEEWLLRLGF 135
            E +  +GWSP P   +  LPF V RT    Q+PVY DY+NGRTR LT+LRR+RGD  EL +EMS++C+ + V + PG ++VVG++ + V +WL+ LGF
Sbjct:   57 EKVSFNGWSPAPEAPLTGLPFHVKRTATGLQLPVYRDYRNGRTRVLTILRRYRGDEHELRDEMSKICEGKEVVIRPGRMEVVGDHFSDVRKWLVGLGF 154          
BLAST of Gchil6799.t1 vs. uniprot
Match: A0A1V9Y9T5_9STRA (Uncharacterized protein n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9Y9T5_9STRA)

HSP 1 Score: 103 bits (257), Expect = 1.550e-25
Identity = 53/110 (48.18%), Postives = 73/110 (66.36%), Query Frame = 0
Query:   28 TLKYPLREISREVIKPSGWSP--PMGGVERLPFRVFRTPKAKQIPVYTDYKNGRTRCLTVLRRFRGDASELAEEMSRVCDDRPVAVHPGSVQVVGNYRARVEEWLLRLGF 135
            TLKY    +  E +  +GWSP  P G +E LPF V RT    Q+PVY DY+NGRTR +T++RR+ GD +EL EE+S VCD  PV   PG ++VVG+Y  +++++   LGF
Sbjct:   50 TLKYEPTYVP-EKVSFNGWSPARPEGPLEGLPFSVKRTSTGLQLPVYRDYRNGRTRIITIVRRYDGDEAELLEELSTVCDGSPVISRPGRLEVVGDYSNKIKQYFTGLGF 158          
BLAST of Gchil6799.t1 vs. uniprot
Match: M4BYA2_HYAAE (Uncharacterized protein n=1 Tax=Hyaloperonospora arabidopsidis (strain Emoy2) TaxID=559515 RepID=M4BYA2_HYAAE)

HSP 1 Score: 102 bits (255), Expect = 2.790e-25
Identity = 48/98 (48.98%), Postives = 67/98 (68.37%), Query Frame = 0
Query:   39 EVIKPSGWSP-PMGGVERLPFRVFRTPKAKQIPVYTDYKNGRTRCLTVLRRFRGDASELAEEMSRVCDDRPVAVHPGSVQVVGNYRARVEEWLLRLGF 135
            E +  +GWSP P   +  LPF V RT    Q+PVY DY+NGRTR LT+LRR++GD  EL +EMS+VC+ + V   PG ++VVG++   + +WL+ LGF
Sbjct:   57 ETVSFNGWSPAPESPLPDLPFHVKRTALGLQLPVYRDYRNGRTRVLTILRRYKGDEQELRDEMSKVCEGKQVTARPGRLEVVGDHAVDIRKWLVGLGF 154          
BLAST of Gchil6799.t1 vs. uniprot
Match: D0NCG0_PHYIT (Uncharacterized protein n=8 Tax=Peronosporaceae TaxID=4777 RepID=D0NCG0_PHYIT)

HSP 1 Score: 102 bits (254), Expect = 3.940e-25
Identity = 48/98 (48.98%), Postives = 68/98 (69.39%), Query Frame = 0
Query:   39 EVIKPSGWSP-PMGGVERLPFRVFRTPKAKQIPVYTDYKNGRTRCLTVLRRFRGDASELAEEMSRVCDDRPVAVHPGSVQVVGNYRARVEEWLLRLGF 135
            E +  +GWSP P   +  LPF V RT    Q+PVY D++NGRTR LT+LRR++GD  EL +EMS+VC  + V V PG ++VVG++ + + +WL+ LGF
Sbjct:   57 EKVSFNGWSPAPEAPLSGLPFHVKRTATGMQLPVYRDFRNGRTRVLTILRRYKGDEQELRDEMSKVCQGKEVIVRPGRLEVVGDHASDIRKWLVGLGF 154          
BLAST of Gchil6799.t1 vs. uniprot
Match: A0A6A3EWI4_9STRA (Uncharacterized protein n=3 Tax=Phytophthora TaxID=4783 RepID=A0A6A3EWI4_9STRA)

HSP 1 Score: 101 bits (251), Expect = 1.120e-24
Identity = 53/126 (42.06%), Postives = 76/126 (60.32%), Query Frame = 0
Query:   26 PSTLKYPLREISREVIKP---------------SGWSP-PMGGVERLPFRVFRTPKAKQIPVYTDYKNGRTRCLTVLRRFRGDASELAEEMSRVCDDRPVAVHPGSVQVVGNYRARVEEWLLRLGF 135
            P+ L+   R+   EV+ P               +GWSP P   +  LPF V RT    Q+PVY D++NGRTR LT+LRR++GD  EL +EMS+VC  + V V PG ++VVG++ + + +WL+ LGF
Sbjct:   29 PANLRALQRQPQEEVVMPPLKFEPSYVPEKVSFNGWSPAPEAPLPGLPFHVKRTAVGMQLPVYRDFRNGRTRVLTILRRYKGDELELRDEMSKVCQGKEVVVRPGRLEVVGDHASDIRKWLVGLGF 154          
BLAST of Gchil6799.t1 vs. uniprot
Match: A0A6G0XJU0_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0XJU0_9STRA)

HSP 1 Score: 100 bits (249), Expect = 2.490e-24
Identity = 47/99 (47.47%), Postives = 68/99 (68.69%), Query Frame = 0
Query:   39 EVIKPSGWSPPM--GGVERLPFRVFRTPKAKQIPVYTDYKNGRTRCLTVLRRFRGDASELAEEMSRVCDDRPVAVHPGSVQVVGNYRARVEEWLLRLGF 135
            E +  +GWSP    G ++ +PF V RT    Q+PVY DY+NGRTR +T++RRF GD +EL +E+S VC  +PV   PG ++VVG+Y A ++++L  LGF
Sbjct:   60 EKVSFNGWSPARAEGPLDGIPFHVKRTATGLQLPVYRDYRNGRTRVITIVRRFHGDEAELQQELSTVCKGKPVVSRPGRLEVVGDYAAEIKQYLTGLGF 158          
BLAST of Gchil6799.t1 vs. uniprot
Match: K3X7C0_GLOUD (Uncharacterized protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3X7C0_GLOUD)

HSP 1 Score: 99.8 bits (247), Expect = 4.480e-24
Identity = 50/98 (51.02%), Postives = 66/98 (67.35%), Query Frame = 0
Query:   39 EVIKPSGWSP-PMGGVERLPFRVFRTPKAKQIPVYTDYKNGRTRCLTVLRRFRGDASELAEEMSRVCDDRPVAVHPGSVQVVGNYRARVEEWLLRLGF 135
            E +  +GWSP P   +  LPF V RT    Q+PVY DY+NGRTR LT+LRRF+GD  EL  EMS+VC  + V V PG ++VVG++   +++WL  LGF
Sbjct:   57 EKVSFNGWSPAPEAPLPNLPFHVKRTALGLQLPVYRDYRNGRTRVLTILRRFKGDEEELRTEMSKVCLGKEVIVRPGRLEVVGDHVGDLKKWLTGLGF 154          
The following BLAST results are available for this feature:
BLAST of Gchil6799.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2V3J348_9FLOR8.100e-7280.1539S ribosomal protein L49, mitochondrial n=1 Tax=G... [more]
A0A7S1TH73_9RHOD1.640e-3146.88Hypothetical protein n=1 Tax=Compsopogon caeruleus... [more]
M2Y791_GALSU1.490e-2846.02Uncharacterized protein n=1 Tax=Galdieria sulphura... [more]
A0A484E697_BRELC9.830e-2650.00Uncharacterized protein n=1 Tax=Bremia lactucae Ta... [more]
A0A1V9Y9T5_9STRA1.550e-2548.18Uncharacterized protein n=1 Tax=Achlya hypogyna Ta... [more]
M4BYA2_HYAAE2.790e-2548.98Uncharacterized protein n=1 Tax=Hyaloperonospora a... [more]
D0NCG0_PHYIT3.940e-2548.98Uncharacterized protein n=8 Tax=Peronosporaceae Ta... [more]
A0A6A3EWI4_9STRA1.120e-2442.06Uncharacterized protein n=3 Tax=Phytophthora TaxID... [more]
A0A6G0XJU0_9STRA2.490e-2447.47Uncharacterized protein n=1 Tax=Aphanomyces euteic... [more]
K3X7C0_GLOUD4.480e-2451.02Uncharacterized protein n=1 Tax=Globisporangium ul... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR007740Ribosomal protein L49/IMG2PFAMPF05046Img2coord: 56..135
e-value: 3.4E-17
score: 62.5
IPR007740Ribosomal protein L49/IMG2PANTHERPTHR13477MITOCHONDRIAL 39S RIBOSOMAL PROTEIN L49coord: 30..135
NoneNo IPR availableGENE3D3.30.780.10coord: 19..135
e-value: 6.8E-21
score: 76.6

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00004416_piloncontigtig00004416_pilon:1209126..1209533 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria chilensis NLEC103_M9 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gchil6799.t1Gchil6799.t1Gracilaria chilensis NLEC103_M9 malemRNAtig00004416_pilon 1209126..1209533 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gchil6799.t1 ID=Gchil6799.t1|Name=Gchil6799.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=polypeptide|length=136bp
MFSPRVSTRLFSTAAHLHPRPPWTPPSTLKYPLREISREVIKPSGWSPPM
GGVERLPFRVFRTPKAKQIPVYTDYKNGRTRCLTVLRRFRGDASELAEEM
SRVCDDRPVAVHPGSVQVVGNYRARVEEWLLRLGF*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR007740Ribosomal_L49/IMG2