Gchil5451.t1 (polypeptide) Gracilaria chilensis NLEC103_M9 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGchil5451.t1
Unique NameGchil5451.t1
Typepolypeptide
OrganismGracilaria chilensis NLEC103_M9 male (Gracilaria chilensis NLEC103_M9 male)
Sequence length464
Homology
BLAST of Gchil5451.t1 vs. uniprot
Match: A0A2V3J6D2_9FLOR (Transcription factor BOA n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J6D2_9FLOR)

HSP 1 Score: 353 bits (907), Expect = 1.400e-114
Identity = 215/430 (50.00%), Postives = 284/430 (66.05%), Query Frame = 0
Query:    1 MNLEHPQSSHYVAHQTQQHRQAEHPYPSTWTSSHTPQRYESAQPAAPALP-VVTMNVYAIPFAYTVNNEPLFLQFGSHFAAEAAQSASYLRQRYWQMKTQPATREDYAYSAAAVSRPARAFDQMQASATDRYQHYESGSVPRPQPTFEYQY-STGNAEGRAREHNTIVPRSVGNEMNPQPPPLPQR-VHREPEVARSVVPDIPPVQSISA-KDGIKNHHVNSAMHPTHVNSNVNYETEDRCSDRSGRGLGVAANVLKEQSAHHESNDVRDSSHHPMSIPNVSHPNDVTVKTSNFSESDKPSRSRGSKRFSDGHSNDTEGRSSKRSRLHWTQELHASFLAAVEKLGIGKAVPTSIIREMGVEGLTRENVASHLQKHRTSLKKAEDEAEKKELVETLKIFIQSDPNNPRKGMSDEDVLKEAAARQRLRRNEK 426
            MN E  Q+S Y   QTQQ    EH Y   WTS   P RYE   P+  A+P VVTM VYA+P AYT NNEPLFLQFG+  AAEAA+ A  L QRYWQM++Q   R +Y  S A ++R  + +D       DRY  YESG + R    +EY Y ST   +    E+N    +S   +   Q     Q  V+ EP++ARSVVPDI   Q ++A KD     + ++A+H   VN +  ++TEDRCSDRS R  G  ++  KEQS HH+SND+RD+S H  ++    +P DV  K +N + S+K +R+RGSKR+S+G S +T+ R  KRSRL+W+ +LHASFLAAV+KLGI  AVPT+IIREM  EGL+RENVASHLQK+R+ LKK +++AEK+EL+ETLK  +++DPNNP+K ++DEDVLK AA R+R  +N K
Sbjct:    1 MNPEQQQASLYPPGQTQQGPHNEHAYARAWTSQ-PPLRYEHV-PSTSAVPGVVTMTVYAVPCAYTANNEPLFLQFGTQTAAEAARYAINLEQRYWQMRSQAEARGEYTRSPATLNRSGKPYDPTIPQHNDRYDPYESGYLRRNTQNYEYPYPSTDATQATRTEYNVTTNQSAAYDPQQQHCSQVQGPVYAEPDIARSVVPDISRTQPVTAVKDSYNEANASTAVHIAPVNRDPTFDTEDRCSDRSRRDPGQLSSTHKEQSVHHDSNDIRDTSRHNTNVXXXXNPTDVDTKRTNCTGSEKATRARGSKRYSEGQSQNTDERP-KRSRLNWSPKLHASFLAAVQKLGIEHAVPTAIIREMKAEGLSRENVASHLQKYRSMLKKEKEDAEKRELLETLKTLMENDPNNPQKSLTDEDVLKVAAERKRSFQNSK 427          
BLAST of Gchil5451.t1 vs. uniprot
Match: A0A7R9TMS0_MICPS (Hypothetical protein (Fragment) n=1 Tax=Micromonas pusilla TaxID=38833 RepID=A0A7R9TMS0_MICPS)

HSP 1 Score: 87.4 bits (215), Expect = 1.890e-16
Identity = 45/77 (58.44%), Postives = 56/77 (72.73%), Query Frame = 0
Query:  301 GSKRFSDGHSNDTEGRSSKRSRLHWTQELHASFLAAVEKLGIGKAVPTSIIREMGVEGLTRENVASHLQKHRTSLKK 377
            G KR SDG    T GR++K+ RL WT ELH  F++AV  LGI  AVP +I++ M VEG+TRENVASHLQK+R  LK+
Sbjct:   44 GEKRVSDGEKEATSGRATKKRRLVWTPELHVRFMSAVNHLGIANAVPKTILQLMNVEGMTRENVASHLQKYRLYLKR 120          
BLAST of Gchil5451.t1 vs. uniprot
Match: A4S5P7_OSTLU (HTH myb-type domain-containing protein n=1 Tax=Ostreococcus lucimarinus (strain CCE9901) TaxID=436017 RepID=A4S5P7_OSTLU)

HSP 1 Score: 86.3 bits (212), Expect = 2.050e-15
Identity = 42/66 (63.64%), Postives = 55/66 (83.33%), Query Frame = 0
Query:  318 SKRSRLHWTQELHASFLAAVEKLGIGKAVPTSIIREMGVEGLTRENVASHLQKHRTSLKKAEDEAE 383
            SKR RL WT +LHA F+AAV+KLG+  AVP +I++ M V+GLTRENVASHLQK+R +LK+A+D +E
Sbjct:  107 SKRQRLVWTPQLHAQFIAAVQKLGVKTAVPKAIMKIMNVKGLTRENVASHLQKYRLTLKRAQDSSE 172          
BLAST of Gchil5451.t1 vs. uniprot
Match: C1N0L8_MICPC (G2-like myb-family transcription factor n=2 Tax=Micromonas pusilla TaxID=38833 RepID=C1N0L8_MICPC)

HSP 1 Score: 86.7 bits (213), Expect = 5.320e-15
Identity = 45/77 (58.44%), Postives = 56/77 (72.73%), Query Frame = 0
Query:  301 GSKRFSDGHSNDTEGRSSKRSRLHWTQELHASFLAAVEKLGIGKAVPTSIIREMGVEGLTRENVASHLQKHRTSLKK 377
            G KR SDG    T GR++K+ RL WT ELH  F++AV  LGI  AVP +I++ M VEG+TRENVASHLQK+R  LK+
Sbjct:   41 GEKRVSDGEKEATSGRATKKRRLVWTPELHVRFMSAVNHLGITNAVPKTILQLMNVEGMTRENVASHLQKYRLYLKR 117          
BLAST of Gchil5451.t1 vs. uniprot
Match: A0A090MAV9_OSTTA (Myb domain, plants n=2 Tax=Ostreococcus tauri TaxID=70448 RepID=A0A090MAV9_OSTTA)

HSP 1 Score: 82.8 bits (203), Expect = 1.210e-14
Identity = 43/68 (63.24%), Postives = 53/68 (77.94%), Query Frame = 0
Query:  319 KRSRLHWTQELHASFLAAVEKLGIGKAVPTSIIREMGVEGLTRENVASHLQKHRTSLKKAEDEAEKKE 386
            KR+RL WT  LHA F+AAVEKLG+  AVP SI++ M VEGLTRENVASHLQK+R +LK+ +  +E  E
Sbjct:   72 KRARLVWTPALHAQFVAAVEKLGVDAAVPKSIMKIMNVEGLTRENVASHLQKYRINLKRKKFSSESTE 139          
BLAST of Gchil5451.t1 vs. uniprot
Match: A0A7J7PME6_9CHLO (Homeodomain-like protein (Fragment) n=2 Tax=Scenedesmus sp. NREL 46B-D3 TaxID=2650976 RepID=A0A7J7PME6_9CHLO)

HSP 1 Score: 77.0 bits (188), Expect = 7.140e-14
Identity = 38/58 (65.52%), Postives = 47/58 (81.03%), Query Frame = 0
Query:  320 RSRLHWTQELHASFLAAVEKLGIGKAVPTSIIREMGVEGLTRENVASHLQKHRTSLKK 377
            ++RL WT  LHA FLAAV++LGI  AVP +I+R MGV G+TRENVASHLQK+R  LK+
Sbjct:   29 KARLIWTPALHARFLAAVQQLGIANAVPKTILRMMGVGGMTRENVASHLQKYRLYLKR 86          
BLAST of Gchil5451.t1 vs. uniprot
Match: A0A7J7QQC7_9CHLO (HTH myb-type domain-containing protein n=1 Tax=Scenedesmus sp. NREL 46B-D3 TaxID=2650976 RepID=A0A7J7QQC7_9CHLO)

HSP 1 Score: 81.6 bits (200), Expect = 1.770e-13
Identity = 43/66 (65.15%), Postives = 51/66 (77.27%), Query Frame = 0
Query:  312 DTEGRSSKRSRLHWTQELHASFLAAVEKLGIGKAVPTSIIREMGVEGLTRENVASHLQKHRTSLKK 377
            D + R+ KR RL WT +LHA F  AV KLG+ KAVP +I++ M VEGLTRENVASHLQK+R SLKK
Sbjct:   95 DNQARALKRPRLVWTPQLHALFEEAVGKLGLEKAVPKTIMQMMNVEGLTRENVASHLQKYRLSLKK 160          
BLAST of Gchil5451.t1 vs. uniprot
Match: D8U936_VOLCA (HTH myb-type domain-containing protein (Fragment) n=1 Tax=Volvox carteri f. nagariensis TaxID=3068 RepID=D8U936_VOLCA)

HSP 1 Score: 73.9 bits (180), Expect = 4.510e-13
Identity = 35/54 (64.81%), Postives = 44/54 (81.48%), Query Frame = 0
Query:  319 KRSRLHWTQELHASFLAAVEKLGIGKAVPTSIIREMGVEGLTRENVASHLQKHR 372
            KR RL WT +LH  F +AV+KLG  KAVP +I++EM ++GLTRENVASHLQK+R
Sbjct:    3 KRPRLVWTPQLHKKFESAVQKLGTEKAVPKNIMQEMNIDGLTRENVASHLQKYR 56          
BLAST of Gchil5451.t1 vs. uniprot
Match: A0A5B8MGD7_9CHLO (HTH myb-type domain-containing protein n=1 Tax=Chloropicon primus TaxID=1764295 RepID=A0A5B8MGD7_9CHLO)

HSP 1 Score: 77.4 bits (189), Expect = 4.790e-13
Identity = 37/64 (57.81%), Postives = 49/64 (76.56%), Query Frame = 0
Query:  319 KRSRLHWTQELHASFLAAVEKLGIGKAVPTSIIREMGVEGLTRENVASHLQKHRTSLKKAEDEA 382
            KR RL WT++LH  F+ AV K+G+ +AVP +I++ M V+G+TRENVASHLQK+R  LKK   EA
Sbjct:   97 KRPRLIWTRQLHERFVEAVNKMGVDQAVPKAIMQSMNVKGITRENVASHLQKYRAQLKKRSAEA 160          
BLAST of Gchil5451.t1 vs. uniprot
Match: UPI000A29DDCC (putative two-component response regulator-like APRR4 isoform X1 n=1 Tax=Arabidopsis lyrata subsp. lyrata TaxID=81972 RepID=UPI000A29DDCC)

HSP 1 Score: 81.3 bits (199), Expect = 7.370e-13
Identity = 42/75 (56.00%), Postives = 58/75 (77.33%), Query Frame = 0
Query:  317 SSKRSRLHWTQELHASFLAAVEKLGIGKAVPTSIIREMGVEGLTRENVASHLQKHRTSLKKAEDEAEKKELVETL 391
            SSK+ R+ WT+ELH  F+ AVE LG+ KAVP  I+  M VE L+RENVASHLQK+R +LKK E++ +K+E+ ++L
Sbjct:  223 SSKKRRVVWTKELHKKFVDAVEYLGLDKAVPKKILELMNVENLSRENVASHLQKYRITLKKDEEKIKKEEMNKSL 297          
The following BLAST results are available for this feature:
BLAST of Gchil5451.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2V3J6D2_9FLOR1.400e-11450.00Transcription factor BOA n=1 Tax=Gracilariopsis ch... [more]
A0A7R9TMS0_MICPS1.890e-1658.44Hypothetical protein (Fragment) n=1 Tax=Micromonas... [more]
A4S5P7_OSTLU2.050e-1563.64HTH myb-type domain-containing protein n=1 Tax=Ost... [more]
C1N0L8_MICPC5.320e-1558.44G2-like myb-family transcription factor n=2 Tax=Mi... [more]
A0A090MAV9_OSTTA1.210e-1463.24Myb domain, plants n=2 Tax=Ostreococcus tauri TaxI... [more]
A0A7J7PME6_9CHLO7.140e-1465.52Homeodomain-like protein (Fragment) n=2 Tax=Scened... [more]
A0A7J7QQC7_9CHLO1.770e-1365.15HTH myb-type domain-containing protein n=1 Tax=Sce... [more]
D8U936_VOLCA4.510e-1364.81HTH myb-type domain-containing protein (Fragment) ... [more]
A0A5B8MGD7_9CHLO4.790e-1357.81HTH myb-type domain-containing protein n=1 Tax=Chl... [more]
UPI000A29DDCC7.370e-1356.00putative two-component response regulator-like APR... [more]

Pages

back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 361..388
NoneNo IPR availableGENE3D1.10.10.60coord: 317..378
e-value: 2.6E-25
score: 90.2
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..42
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 170..323
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 398..463
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 296..323
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..40
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 444..463
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 268..295
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 403..430
IPR017930Myb domainPFAMPF00249Myb_DNA-bindingcoord: 324..371
e-value: 2.5E-6
score: 27.6
IPR017930Myb domainPROSITEPS51294HTH_MYBcoord: 317..376
score: 11.924836
IPR006447Myb domain, plantsTIGRFAMTIGR01557TIGR01557coord: 321..373
e-value: 6.0E-21
score: 72.5
IPR044841Transcription factor LUX/BOA-likePANTHERPTHR31442HOMEODOMAIN-LIKE SUPERFAMILY PROTEIN-RELATEDcoord: 257..452
IPR009057Homeobox-like domain superfamilySUPERFAMILY46689Homeodomain-likecoord: 318..377

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00004418_piloncontigtig00004418_pilon:1768764..1770155 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria chilensis NLEC103_M9 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gchil5451.t1Gchil5451.t1Gracilaria chilensis NLEC103_M9 malemRNAtig00004418_pilon 1768764..1770155 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gchil5451.t1 ID=Gchil5451.t1|Name=Gchil5451.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=polypeptide|length=464bp
MNLEHPQSSHYVAHQTQQHRQAEHPYPSTWTSSHTPQRYESAQPAAPALP
VVTMNVYAIPFAYTVNNEPLFLQFGSHFAAEAAQSASYLRQRYWQMKTQP
ATREDYAYSAAAVSRPARAFDQMQASATDRYQHYESGSVPRPQPTFEYQY
STGNAEGRAREHNTIVPRSVGNEMNPQPPPLPQRVHREPEVARSVVPDIP
PVQSISAKDGIKNHHVNSAMHPTHVNSNVNYETEDRCSDRSGRGLGVAAN
VLKEQSAHHESNDVRDSSHHPMSIPNVSHPNDVTVKTSNFSESDKPSRSR
GSKRFSDGHSNDTEGRSSKRSRLHWTQELHASFLAAVEKLGIGKAVPTSI
IREMGVEGLTRENVASHLQKHRTSLKKAEDEAEKKELVETLKIFIQSDPN
NPRKGMSDEDVLKEAAARQRLRRNEKETTLKDSVQAIAPHAPKHHTQGTE
RQEPPKAQKRGNR*
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR017930Myb_dom
IPR006447Myb_dom_plants
IPR044841LUX/BOA-like
IPR009057Homeobox-like_sf