Gchil534.t1 (polypeptide) Gracilaria chilensis NLEC103_M9 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGchil534.t1
Unique NameGchil534.t1
Typepolypeptide
OrganismGracilaria chilensis NLEC103_M9 male (Gracilaria chilensis NLEC103_M9 male)
Sequence length620
Homology
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BLAST of Gchil534.t1 vs. uniprot
Match: A0A2V3IPS6_9FLOR (DRBM domain-containing protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IPS6_9FLOR)

HSP 1 Score: 161 bits (407), Expect = 3.240e-38
Identity = 189/651 (29.03%), Postives = 271/651 (41.63%), Query Frame = 0 
Query:    1 MASRRDAASNMLRQIYAKGLPPGPASAAVTAXXXXXXXXXXPPMLAQPISQQ---PVNQSSYPLHSRSFSS---------NYASYPQPA-LHS-PLTNQPIHPVKQQPLQXXXXXXLSHSQTLHPHSPPXXXXXXXXLRSHPSQQYQLPAQHPIPPNHSLHHQPPLXXXXXXXXXXXXXXXXXXXXTLRPVQDHKPQPLQPXXXXXXXXXXXXLFYVDRSPDSDLERELEXXXXXXXXXXXXPAHEGTSQQPTQTAAMHTIPDASRSTSAPQTVSGAQPLTTPSHVPTSIAPRPTNXXXXXXXXXXXXXXXXXXXXAVPSVAQLAHQIATPSKDIEMAPLPSSEVETGAKRVDKPIPAFQQVQTSAMPAVPRSTTVLDASATSPASGLGSQDLMHGRTHAAN---NIDFARTAGIFASALPHVQPSVSQKNG---------------HTASKSDASS---AVPHLKRRLGTDSQWPGVNGKGDKIMTAEPLPKKARGMSSPPATPIEFHILCAYDENVRKCLQELFAANLFILPRIHLFSSDNGLELIEVAPGVSVPVTTFEQNVGERPEHVAVALAFEAGSLSTDLWVARAKHLAKGLQSALMPRMVLLSTNPLLQAFAKMDVIDVVDPKDSLVGYALEILQQSSQNQGK 616
            ++SRRDAA NMLR IY+K +PP  AS A  A            +  QP  Q    PV Q+      R +SS          ++  PQP+ +H  P   QP HP  +Q           H          XXXXXXXX                   +H   +QP                       ++PVQ+ +P+  Q             +FYVDRSPDS+LERELEXXXX               QQ  Q  A    PDAS   +     S ++  T     P +  PRP N                     +P     A   + PS  +   P  SS ++        PI A          AVP ++  +   + +PAS L +Q   +G + AA    N+  A T    +     V P  ++ +                 T S SD ++   A P LKR+L         NG  +     E   KKA+ + S P+  IEFH LC Y + + +CLQ L  A+LF+ P I +F++      ++ +P ++V V  F  N+      V+VALAFEAG +S ++W+ARAKHL +GL S   P++++L+ +     F K  V DVV P D +  +   ILQ+ + ++ K
Sbjct:  128 LSSRRDAACNMLRIIYSKTVPPH-ASPAAGAANMPRTSSPSHSLAGQPQMQPASYPVTQTRQVFPIRPYSSLPHPSQGRMPHSGVPQPSPVHQGPGHIQPFHPTGKQEQLQPQPPMQQHQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSHETQYQP-----------QQPELGAQEQQNVQPVQE-QPEGQQ---VKQKEEEQEPMFYVDRSPDSELERELEXXXXQQKQL-------SAEQQALQPPA----PDASAEEAVKPVASNSESSTAQPSAPQASVPRPVNESGPPMLRSKP----------IPVSTSGATSASLPSSSVNATP--SSPLKPMFSVAATPISAHPVRDPRVAVAVPSASAAVSVGSGNPASALQNQSPTNGASAAAEIATNVSVALTPVRESDPPESVGPPSTKPSNPPLSSVKAESSLLPEQTVSLSDGNTIPAAAPSLKRKLNHAVTDRNANGSTNGTAAVEQARKKAKPLLSNPSVRIEFHFLCIYSDVIMRCLQNLIGADLFMRPVIRMFTAAKVPIRVQFSPNLNVEVKQFSCNIQNDISRVSVALAFEAGIISNEMWIARAKHLEEGLSSMYWPQLIILNNDLCFDIFKKNGVTDVVKPSDDVAAHVSRILQRIANSEVK 739
The following BLAST results are available for this feature:
BLAST of Gchil534.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A2V3IPS6_9FLOR3.240e-3829.03DRBM domain-containing protein n=1 Tax=Gracilariop... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 208..228
NoneNo IPR availablePRINTSPR01217PRICHEXTENSNcoord: 112..133
score: 34.55
coord: 135..151
score: 34.12
coord: 187..212
score: 27.69
coord: 152..169
score: 27.78
coord: 74..86
score: 29.23
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 201..221
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 181..200
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..300
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 409..424
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 409..437
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 43..108
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 109..125
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 144..171
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 222..300
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 27..38
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 39..46
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..46
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 47..619
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..26

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000060_piloncontigtig00000060_pilon:730182..732041 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria chilensis NLEC103_M9 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gchil534.t1Gchil534.t1Gracilaria chilensis NLEC103_M9 malemRNAtig00000060_pilon 730182..732041 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gchil534.t1 ID=Gchil534.t1|Name=Gchil534.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=polypeptide|length=620bp
MASRRDAASNMLRQIYAKGLPPGPASAAVTAAAAAAASSASPPMLAQPIS
QQPVNQSSYPLHSRSFSSNYASYPQPALHSPLTNQPIHPVKQQPLQQPLS
YPLSHSQTLHPHSPPPPPPQPQPLRSHPSQQYQLPAQHPIPPNHSLHHQP
PLHQPPQHQPPHQPPPQQHRPSTLRPVQDHKPQPLQPPPPPPPPEEEPPL
FYVDRSPDSDLERELEQQEQQEQQEQHQPAHEGTSQQPTQTAAMHTIPDA
SRSTSAPQTVSGAQPLTTPSHVPTSIAPRPTNTPQPSVAVAATPTTTGPT
STAVPSVAQLAHQIATPSKDIEMAPLPSSEVETGAKRVDKPIPAFQQVQT
SAMPAVPRSTTVLDASATSPASGLGSQDLMHGRTHAANNIDFARTAGIFA
SALPHVQPSVSQKNGHTASKSDASSAVPHLKRRLGTDSQWPGVNGKGDKI
MTAEPLPKKARGMSSPPATPIEFHILCAYDENVRKCLQELFAANLFILPR
IHLFSSDNGLELIEVAPGVSVPVTTFEQNVGERPEHVAVALAFEAGSLST
DLWVARAKHLAKGLQSALMPRMVLLSTNPLLQAFAKMDVIDVVDPKDSLV
GYALEILQQSSQNQGKALE*
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