Gchil4302.t1 (polypeptide) Gracilaria chilensis NLEC103_M9 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	Gchil4302.t1
Unique Name	Gchil4302.t1
Type	polypeptide
Organism	Gracilaria chilensis NLEC103_M9 male (Gracilaria chilensis NLEC103_M9 male)
Sequence length	661

Homology

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BLAST of Gchil4302.t1 vs. uniprot
Match: A0A2V3J0A6_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J0A6_9FLOR)

HSP 1 Score: 124 bits (310), Expect = 7.400e-30
Identity = 59/111 (53.15%), Postives = 75/111 (67.57%), Query Frame = 0

Query:  551 CNCIPDANDT-CDPCVGGGNALCGASGLPPRFQCCPPTSGCKSSVIPRRLNSTPNDLRVSFICSSSCGESC-DVKTSMGESRACSLFDPVPLGTDNNPDTDDVFDTCPDLA 659
            C   P+ ND  C+PC   GN  C  +GLP  FQCCPPTS CK +VIP RL    N L VSF+CS +CG +C D++ S GES AC+LF P+ L  D++PDTDDV + CPD++
Sbjct:    4 CEPDPNTNDAECNPCENNGNRFCQIAGLPNAFQCCPPTSNCKDTVIPTRLGVPQNSLEVSFVCSRNCGSTCTDIRNSDGESNACALFTPLDLNDDSDPDTDDVLNLCPDVS 114

[Close]

BLAST of Gchil4302.t1 vs. uniprot
Match: A0A2V3J377_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J377_9FLOR)

HSP 1 Score: 123 bits (309), Expect = 1.000e-25
Identity = 59/111 (53.15%), Postives = 74/111 (66.67%), Query Frame = 0

Query:  551 CNCIPDANDT-CDPCVGGGNALCGASGLPPRFQCCPPTSGCKSSVIPRRLNSTPNDLRVSFICSSSCGESC-DVKTSMGESRACSLFDPVPLGTDNNPDTDDVFDTCPDLA 659
            C   P+ ND  C+PC   GN  C  +GLP  FQCCPPTS CK +VIP RL    N L VSF+CS +CG +C D++ S GES AC+LF P+PL  D + DTDDV + CPD++
Sbjct:  562 CEPDPNTNDAECNPCENNGNRFCQIAGLPNAFQCCPPTSNCKDTVIPTRLGVPQNSLEVSFVCSRNCGSTCTDIRNSDGESNACALFTPLPLNDDGDADTDDVLNLCPDVS 672

The following BLAST results are available for this feature:

BLAST of Gchil4302.t1 vs. uniprot

BLAST of Gchil4302.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2


Match Name	E-value	Identity	Description
A0A2V3J0A6_9FLOR	7.400e-30	53.15	Uncharacterized protein n=1 Tax=Gracilariopsis cho...	[more]
A0A2V3J377_9FLOR	1.000e-25	53.15	Uncharacterized protein n=1 Tax=Gracilariopsis cho...	[more]

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PHOBIUS	SIGNAL_PEPTIDE_H_REGION	Signal peptide H-region	coord: 3..14
None	No IPR available	PHOBIUS	SIGNAL_PEPTIDE_C_REGION	Signal peptide C-region	coord: 15..19
None	No IPR available	PHOBIUS	NON_CYTOPLASMIC_DOMAIN	Non cytoplasmic domain	coord: 20..660
None	No IPR available	PHOBIUS	SIGNAL_PEPTIDE_N_REGION	Signal peptide N-region	coord: 1..2
None	No IPR available	PHOBIUS	SIGNAL_PEPTIDE	Signal Peptide	coord: 1..19

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
tig00004373_pilon	contig	tig00004373_pilon:1984793..1986857 -

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-06-01
Diamond blastp: OGS1.0 vs UniRef90	2022-06-02
Gracilaria chilensis NLEC103_M9 male OGS1.0	2022-05-09

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
Gchil4302.t1	Gchil4302.t1	Gracilaria chilensis NLEC103_M9 male	mRNA	tig00004373_pilon 1984793..1986857 -

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>Gchil4302.t1 ID=Gchil4302.t1|Name=Gchil4302.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=polypeptide|length=661bp
MKIFTLCAAFVLLLCSSSAHPLERFSPVQLPHLSLRASSLAACGYDTFQS
GSQTLFAGRDQREVGSVEFTLSSSGISVEYSVIDGCVLKDDIHVNIVNQV
LETVRPGRFPCKDSVSGSPTTVSITCPATSFTGLNCCERLYVYTHGVVSC
QSGSDTVYAGVPVCTGRGQWCNAVIIDDPPCECACENDACVVPQDCAISN
PGSCDSGVVKCPAACAPGPDVSCGAYPETCTSGPVCDSAECEDTEPCDPD
ECPPEGVCPNAAASFDAPKTCVSATPCECGSGTYCKDKSECATQPITCGS
DTCDDGMMKCPGECEMPSVDCGAYPDTCTSGPVCDSADCEDTEPCDPDEC
PPEGVCPNAAASFDAPKTCVSATPCECGSGTYCKDKSECATQPITCGSDT
CDDGMMKCPGECEMPSVDCGAYPDTCTSGPVCDSADCEDTEPCDPDECPP
EGVCPNAAASFDAPKTCVSATPCECGSGTYCKDKSECATQPIMCGSDTCD
EGVMKCEKDCVMPSDCGLPDCSITECPDKCPTKCCDPCPPCFKPDPDSTT
CNCIPDANDTCDPCVGGGNALCGASGLPPRFQCCPPTSGCKSSVIPRRLN
STPNDLRVSFICSSSCGESCDVKTSMGESRACSLFDPVPLGTDNNPDTDD
VFDTCPDLAV*