Gchil4302.t1 (polypeptide) Gracilaria chilensis NLEC103_M9 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGchil4302.t1
Unique NameGchil4302.t1
Typepolypeptide
OrganismGracilaria chilensis NLEC103_M9 male (Gracilaria chilensis NLEC103_M9 male)
Sequence length661
Homology
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BLAST of Gchil4302.t1 vs. uniprot
Match: A0A2V3J0A6_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J0A6_9FLOR)

HSP 1 Score: 124 bits (310), Expect = 7.400e-30
Identity = 59/111 (53.15%), Postives = 75/111 (67.57%), Query Frame = 0 
Query:  551 CNCIPDANDT-CDPCVGGGNALCGASGLPPRFQCCPPTSGCKSSVIPRRLNSTPNDLRVSFICSSSCGESC-DVKTSMGESRACSLFDPVPLGTDNNPDTDDVFDTCPDLA 659
            C   P+ ND  C+PC   GN  C  +GLP  FQCCPPTS CK +VIP RL    N L VSF+CS +CG +C D++ S GES AC+LF P+ L  D++PDTDDV + CPD++
Sbjct:    4 CEPDPNTNDAECNPCENNGNRFCQIAGLPNAFQCCPPTSNCKDTVIPTRLGVPQNSLEVSFVCSRNCGSTCTDIRNSDGESNACALFTPLDLNDDSDPDTDDVLNLCPDVS 114
[Close]
BLAST of Gchil4302.t1 vs. uniprot
Match: A0A2V3J377_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J377_9FLOR)

HSP 1 Score: 123 bits (309), Expect = 1.000e-25
Identity = 59/111 (53.15%), Postives = 74/111 (66.67%), Query Frame = 0 
Query:  551 CNCIPDANDT-CDPCVGGGNALCGASGLPPRFQCCPPTSGCKSSVIPRRLNSTPNDLRVSFICSSSCGESC-DVKTSMGESRACSLFDPVPLGTDNNPDTDDVFDTCPDLA 659
            C   P+ ND  C+PC   GN  C  +GLP  FQCCPPTS CK +VIP RL    N L VSF+CS +CG +C D++ S GES AC+LF P+PL  D + DTDDV + CPD++
Sbjct:  562 CEPDPNTNDAECNPCENNGNRFCQIAGLPNAFQCCPPTSNCKDTVIPTRLGVPQNSLEVSFVCSRNCGSTCTDIRNSDGESNACALFTPLPLNDDGDADTDDVLNLCPDVS 672
The following BLAST results are available for this feature:
BLAST of Gchil4302.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A2V3J0A6_9FLOR7.400e-3053.15Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
A0A2V3J377_9FLOR1.000e-2553.15Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 3..14
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 15..19
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 20..660
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..2
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..19

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00004373_piloncontigtig00004373_pilon:1984793..1986857 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria chilensis NLEC103_M9 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gchil4302.t1Gchil4302.t1Gracilaria chilensis NLEC103_M9 malemRNAtig00004373_pilon 1984793..1986857 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gchil4302.t1 ID=Gchil4302.t1|Name=Gchil4302.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=polypeptide|length=661bp
MKIFTLCAAFVLLLCSSSAHPLERFSPVQLPHLSLRASSLAACGYDTFQS
GSQTLFAGRDQREVGSVEFTLSSSGISVEYSVIDGCVLKDDIHVNIVNQV
LETVRPGRFPCKDSVSGSPTTVSITCPATSFTGLNCCERLYVYTHGVVSC
QSGSDTVYAGVPVCTGRGQWCNAVIIDDPPCECACENDACVVPQDCAISN
PGSCDSGVVKCPAACAPGPDVSCGAYPETCTSGPVCDSAECEDTEPCDPD
ECPPEGVCPNAAASFDAPKTCVSATPCECGSGTYCKDKSECATQPITCGS
DTCDDGMMKCPGECEMPSVDCGAYPDTCTSGPVCDSADCEDTEPCDPDEC
PPEGVCPNAAASFDAPKTCVSATPCECGSGTYCKDKSECATQPITCGSDT
CDDGMMKCPGECEMPSVDCGAYPDTCTSGPVCDSADCEDTEPCDPDECPP
EGVCPNAAASFDAPKTCVSATPCECGSGTYCKDKSECATQPIMCGSDTCD
EGVMKCEKDCVMPSDCGLPDCSITECPDKCPTKCCDPCPPCFKPDPDSTT
CNCIPDANDTCDPCVGGGNALCGASGLPPRFQCCPPTSGCKSSVIPRRLN
STPNDLRVSFICSSSCGESCDVKTSMGESRACSLFDPVPLGTDNNPDTDD
VFDTCPDLAV*
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