Gchil3673.t1 (polypeptide) Gracilaria chilensis NLEC103_M9 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGchil3673.t1
Unique NameGchil3673.t1
Typepolypeptide
OrganismGracilaria chilensis NLEC103_M9 male (Gracilaria chilensis NLEC103_M9 male)
Sequence length495
Homology
BLAST of Gchil3673.t1 vs. uniprot
Match: A0A2V3IYL7_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IYL7_9FLOR)

HSP 1 Score: 650 bits (1677), Expect = 3.250e-230
Identity = 333/494 (67.41%), Postives = 401/494 (81.17%), Query Frame = 0
Query:    1 MAILSPALVVAMCVMFILTRLHSHFYIFERPLLFGLKYCVEPENAHLEAIAQAGAKSSQPGKKKSRQSSAASK-TKLTASALPVRRGKISETFFPTESEFPHHRELAHITGIVCGYLAAFLFEDVVGCFFPALLANKRSVYVAVFAVCFALYELLLISTSLTSRKAMIALTAASWIVSIFLVSGGDYRNFVKFDKAFQALQSEAHSVLTGRFGVDVNKAQTYARNIAICARVLISTIAALIAASSAVPARRFSRIDYDLNLQYRMDISEHQTDPYSLGPVTSLTMVRIALDYTLPLLFAFLWTVVPRDEDMYSSWRILSLLVCVIAKGTMARIRIQGYLDGAIDAYRRFWTEKPVNGVAEAGRSCSFQVIGTSFYLILITVAYIGPPVITLLLTLVAKHDGGFRMPFCRPRGVDQGLQLETFFREIAGFLAWWSVASYALFGSMSILSEFIIDVIDPSGRDRRKKLPSASSASERRREKRLVQERMMKGRLQPA 493
            MAILSPALVVAMCVMF+LTRLHSHFYIFE PLLFGLKYC+EP+   L AIA+A  K  QPGKKK RQSS+ SK TK+T +ALPVRR KI   FFP+E+EFPHHRELAH+TGIVCGYLAAFLFED +GCFFP LL+N+RSVYVA+FAV FA+YE L IS SLTS++ +IAL  ASWIV++F VS GD+ NF+KFDKAF AL  E   VL      +  K + YA ++ +  R+L++ +AALIAAS+AVPARRFSRIDYDLNLQYRMD ++ + DPY+LGP T LTM+RIALDY +PL  AFLW V PRDED YS WR++ +L+CV  +  MARIRIQGYLDGAIDAYRRFW EK VNGV EAGR+CSFQV+GTSFY++LIT+AY+ P +  L+  LVAKHDGGFR  FCR   +D     +TF+REI GFLAWWS+ASYA F ++S+LSEF++D IDP+GRDRR KLP A+S+SE+RREKRL+QER+M+ RL+PA
Sbjct:    1 MAILSPALVVAMCVMFVLTRLHSHFYIFEHPLLFGLKYCIEPDKNDLAAIAEATNKGLQPGKKKGRQSSSTSKSTKITVTALPVRRAKIDHAFFPSEAEFPHHRELAHVTGIVCGYLAAFLFEDTMGCFFPGLLSNRRSVYVALFAVGFAVYEALKISISLTSKRVVIALAGASWIVALFGVSAGDFSNFIKFDKAFTALSEEVTIVLRDVMDFEPEKVELYATSMTVFVRILVTVVAALIAASTAVPARRFSRIDYDLNLQYRMDEADRRNDPYALGPPTPLTMMRIALDYVVPLGTAFLWAVSPRDEDFYSGWRLIGILLCVAVRFGMARIRIQGYLDGAIDAYRRFWAEKSVNGVVEAGRNCSFQVMGTSFYVMLITMAYVAPALSPLIFALVAKHDGGFRPGFCRSGLLDNDRLTDTFYREIGGFLAWWSLASYATFATVSLLSEFLVDFIDPTGRDRRGKLPVATSSSEKRREKRLLQERIMRNRLRPA 494          
BLAST of Gchil3673.t1 vs. uniprot
Match: R7QD46_CHOCR (Uncharacterized protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QD46_CHOCR)

HSP 1 Score: 434 bits (1117), Expect = 6.840e-144
Identity = 230/476 (48.32%), Postives = 318/476 (66.81%), Query Frame = 0
Query:    1 MAILSPALVVAMCVMFILTRLHSHFYIFERPLLFGLKYCVEPENAHLEAIAQAGA-----KSSQPGKKKSRQSSAAS-----KTKLTASALPVRRGKISETFFPTESEFPHHRELAHITGIVCGYLAAFLFEDVVGCFFPALLANKRSVYVAVFAVCFALYELLLISTSLTSRKAMIALTAASWIVSIFLVSGGDYRNFVKFDKAFQALQSEAHSVLTGRFGVDVNKAQTYARNIAICARVLISTIAALIAASSAVPARRFSRIDYDLNLQYRMDISEHQTDPYSLGPVTSLTMVRIALDYTLPLLFAFLWTVVPRDEDMYSSWRILSLLVCVIAKGTMARIRIQGYLDGAIDAYRRFWTEKPVNGVAEAGRSCSFQVIGTSFYLILITVAYIGPPVITLLLTLVAKHDGGFRMPFCRPRGVDQGLQLETFFREIAGFLAWWSVASYALFGSMSILSEFIIDVIDPSGRDRRKKLP 466
            MA+LSPALV+AMCVMFILTRLH H+YIFE P LFGL YC+EP+   +EAI Q+ +     +SSQ  K K +Q +A +     K K +A++L VRR  ++ETFF  E+EFPHHR+  H+  I CGY AA+ FE+ VGCF+P+LLANKRS YVA+  V FAL+E + IS  +TS + M +L   + + ++ ++S G++ +FV+FD+AF++L     SVL  R  ++V  A  +A+ IA+  R  ++ +A LI+AS+A PAR FS++DY+++ +YR D  + + DPY LG  T+ TM  +ALDY +P L  FLW V PR+   +  WRI+ LL CV  +    R+R+Q YLDGAID YR FWT K    + +A +S S QV+  SFYL++ITV YI P  +  LL  VAK DGG RM  C    V      + F RE+AGFL+WW VASY LF  MS+  ++++DV+DPS R+RR K+P
Sbjct:   36 MAVLSPALVIAMCVMFILTRLHRHYYIFENPFLFGLIYCLEPDREEVEAIMQSSSTSKPSQSSQSNKTKGKQPTARASVQPPKAKYSATSLTVRRNVLNETFFSEEAEFPHHRQFDHLMAICCGYFAAYAFEETVGCFYPSLLANKRSAYVAILGVGFALFEAIRISVGMTSVRIMCSLGVLAGLAALSVISAGNFSSFVRFDEAFESLGEVVTSVLRTRLKINVASADIWAKRIAMVGRFFVAIVAGLISASAAAPARYFSKLDYEMHYEYREDERDRRDDPYYLGRPTASTMFMVALDYVVPFLTVFLWCVSPRERGAFGQWRIVLLLGCVFCRIINLRLRLQAYLDGAIDGYRSFWTTKASLTLQQATQSTSVQVLRNSFYLMMITVLYISPAAVPFLLACVAKLDGGVRMGICPVSSVVTVQAGDIFAREVAGFLSWWCVASYLLFAVMSVSYDYVMDVMDPSARERRMKVP 511          
The following BLAST results are available for this feature:
BLAST of Gchil3673.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A2V3IYL7_9FLOR3.250e-23067.41Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
R7QD46_CHOCR6.840e-14448.32Uncharacterized protein n=1 Tax=Chondrus crispus T... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR019395Transmembrane protein 161A/BPFAMPF10268Tmemb_161ABcoord: 2..402
e-value: 9.7E-14
score: 50.9
IPR019395Transmembrane protein 161A/BPANTHERPTHR13624RE42071Pcoord: 4..443
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 462..485
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 462..494
NoneNo IPR availablePANTHERPTHR13624:SF6RE42071Pcoord: 4..443
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 7..18
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..6
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 429..454
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 455..494
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..23
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 397..428
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 166..184
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 227..246
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 105..132
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 247..283
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 24..104
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 284..304
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 161..165
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 305..371
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 133..138
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 139..160
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 372..396
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 19..23
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 185..226
NoneNo IPR availableTMHMMTMhelixcoord: 429..451
NoneNo IPR availableTMHMMTMhelixcoord: 226..248
NoneNo IPR availableTMHMMTMhelixcoord: 282..304
NoneNo IPR availableTMHMMTMhelixcoord: 138..160
NoneNo IPR availableTMHMMTMhelixcoord: 373..395
NoneNo IPR availableTMHMMTMhelixcoord: 7..28
NoneNo IPR availableTMHMMTMhelixcoord: 111..133
NoneNo IPR availableTMHMMTMhelixcoord: 165..184

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00025222_piloncontigtig00025222_pilon:564411..565895 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria chilensis NLEC103_M9 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gchil3673.t1Gchil3673.t1Gracilaria chilensis NLEC103_M9 malemRNAtig00025222_pilon 564411..565895 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gchil3673.t1 ID=Gchil3673.t1|Name=Gchil3673.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=polypeptide|length=495bp
MAILSPALVVAMCVMFILTRLHSHFYIFERPLLFGLKYCVEPENAHLEAI
AQAGAKSSQPGKKKSRQSSAASKTKLTASALPVRRGKISETFFPTESEFP
HHRELAHITGIVCGYLAAFLFEDVVGCFFPALLANKRSVYVAVFAVCFAL
YELLLISTSLTSRKAMIALTAASWIVSIFLVSGGDYRNFVKFDKAFQALQ
SEAHSVLTGRFGVDVNKAQTYARNIAICARVLISTIAALIAASSAVPARR
FSRIDYDLNLQYRMDISEHQTDPYSLGPVTSLTMVRIALDYTLPLLFAFL
WTVVPRDEDMYSSWRILSLLVCVIAKGTMARIRIQGYLDGAIDAYRRFWT
EKPVNGVAEAGRSCSFQVIGTSFYLILITVAYIGPPVITLLLTLVAKHDG
GFRMPFCRPRGVDQGLQLETFFREIAGFLAWWSVASYALFGSMSILSEFI
IDVIDPSGRDRRKKLPSASSASERRREKRLVQERMMKGRLQPAR*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR019395Transmembrane_161A/B