Gchil3152.t1 (polypeptide) Gracilaria chilensis NLEC103_M9 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGchil3152.t1
Unique NameGchil3152.t1
Typepolypeptide
OrganismGracilaria chilensis NLEC103_M9 male (Gracilaria chilensis NLEC103_M9 male)
Sequence length508
Homology
BLAST of Gchil3152.t1 vs. uniprot
Match: A0A2V3IXJ6_9FLOR (Sentrin-specific protease 1 n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IXJ6_9FLOR)

HSP 1 Score: 271 bits (693), Expect = 5.780e-80
Identity = 176/385 (45.71%), Postives = 234/385 (60.78%), Query Frame = 0
Query:  138 TSTPRSRFLSTPARYSSHVPAFDPQRQFFRNTYAGLLRRRHTSEPA--SAPTKSTPKSIHPTA--VRKSVYKKRFHNTQRHFVSPKVLAKNTRLQP----------LRQSYPSLQQHRSPRPSQLRSQQEALEVSVESRPQERSFLRNENLETIPSPATRAEQIANLPPTIAALLRSDNPLCKKIWKLHKQNIERLASSDQKKRFLELEHFVKWQQLETIKREREQSRRIFSLR---PLLKPLTEEKPQAEQPPHRASHFYENRYWLPPEENWYEDQDDHAQKERDLSVTVTDPRSAYAPLTDSAVSRLRATLADASNQHSELSRVDGCIIRGEDLRTLRPNNWLNDEIVNSYMNLLAERTTFA-RKTKSDENSRPNGHPNSFVN 504
            T+T  +  L+ P R+  H      ++ FFR +YA L      +  A  SAP  S P   HP    +RK+V+K+R     R   + + LAK+TR  P          L    PSL Q   P P   R        S +S P           + +PSP+ RA Q+A+LPP+ A L  +D+ L  K+WK+H + I+RLAS+D   + LEL HFV  Q+L+ ++R +EQ+RRI +LR   P  KPL   KPQ+E+PP RA+HFY + YWLPP  + ++      QK    +VTVTDP+SA+APLTD+AV+RL+A  AD SNQH ELSRVDGCIIRGEDLRTL+PNNWLNDE+VN+YMNL+A R   A +K+ SDEN++PNGHPN   N
Sbjct:  103 TATINNNPLTLP-RHRRHA-----RQHFFRRSYAALNAAAAPTPFAKPSAPA-SVPAPRHPPGPPLRKTVHKRRPLTAHRRLAATRALAKSTRTHPKLYQTHPSPRLNSVLPSLPQKTPPHPPSQRDPS-----SPKSDP-----------DALPSPSQRAAQLAHLPPSFANLFATDSRLSNKLWKVHHKRIQRLASADNNVKALELSHFVARQKLDQLRRLQEQNRRIAALRHTVPKPKPL---KPQSERPPPRAAHFYNHNYWLPPNRDAFDYHLQPPQKHHAAAVTVTDPQSAFAPLTDTAVARLQAIFADPSNQHQELSRVDGCIIRGEDLRTLKPNNWLNDEVVNAYMNLIAARAAKAGKKSSSDENAKPNGHPNDLSN 461          
BLAST of Gchil3152.t1 vs. uniprot
Match: UPI001E1D6058 (sentrin-specific protease 1-like n=1 Tax=Mercenaria mercenaria TaxID=6596 RepID=UPI001E1D6058)

HSP 1 Score: 70.5 bits (171), Expect = 2.850e-9
Identity = 38/101 (37.62%), Postives = 56/101 (55.45%), Query Frame = 0
Query:  381 YENRYWLPPEENWYEDQDDHAQKERDLSVTVTDPRSAYAPLTDSAVSRLRATLADASNQHSELSRVDGCIIRGEDLRTLRPNNWLNDEIVNSYMNLLAERT 481
            ++  + L  +  W E+ D  A  E    VTV    SA+APLT SA+ R+R  +++  N+   L  +    I   DL  L+PN WLNDE+VN Y+ L+ ER+
Sbjct:  175 FDFNFELDEDPEWVEEDDKEAMDEAFRGVTVVKESSAFAPLTRSALKRVRRRMSEPGNR--SLVDISNIPIHTHDLHLLKPNVWLNDEVVNGYLQLVKERS 273          
BLAST of Gchil3152.t1 vs. uniprot
Match: A0A7S2ZHN7_9RHOD (Hypothetical protein n=1 Tax=Rhodosorus marinus TaxID=101924 RepID=A0A7S2ZHN7_9RHOD)

HSP 1 Score: 60.8 bits (146), Expect = 3.450e-6
Identity = 34/90 (37.78%), Postives = 48/90 (53.33%), Query Frame = 0
Query:  409 VTVTDPRSAYAPLTDSAVSRLRATLADASNQHSELSRVDGCIIRGEDLRTLRPNNWLNDEIVNSYMNLLAERTTFARKTKSDENSRPNGH 498
            V+V D     + LT+ A  R+R  L+ +  +   L  ++   + GED+  LRPN WLNDEI+N Y  LL ER   AR  + +    PN H
Sbjct:  397 VSVVDEADPKSDLTEDAKRRVRRALSGSLPRQDVLVDLNNLTLTGEDMLRLRPNQWLNDEIINCYTTLLQERN--ARALEDENCPWPNSH 484          
BLAST of Gchil3152.t1 vs. uniprot
Match: A0A7S2ZI63_9RHOD (Hypothetical protein n=5 Tax=Rhodosorus marinus TaxID=101924 RepID=A0A7S2ZI63_9RHOD)

HSP 1 Score: 60.8 bits (146), Expect = 4.070e-6
Identity = 34/90 (37.78%), Postives = 48/90 (53.33%), Query Frame = 0
Query:  409 VTVTDPRSAYAPLTDSAVSRLRATLADASNQHSELSRVDGCIIRGEDLRTLRPNNWLNDEIVNSYMNLLAERTTFARKTKSDENSRPNGH 498
            V+V D     + LT+ A  R+R  L+ +  +   L  ++   + GED+  LRPN WLNDEI+N Y  LL ER   AR  + +    PN H
Sbjct:  419 VSVVDEADPKSDLTEDAKRRVRRALSGSLPRQDVLVDLNNLTLTGEDMLRLRPNQWLNDEIINCYTTLLQERN--ARALEDENCPWPNSH 506          
The following BLAST results are available for this feature:
BLAST of Gchil3152.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 4
Match NameE-valueIdentityDescription
A0A2V3IXJ6_9FLOR5.780e-8045.71Sentrin-specific protease 1 n=1 Tax=Gracilariopsis... [more]
UPI001E1D60582.850e-937.62sentrin-specific protease 1-like n=1 Tax=Mercenari... [more]
A0A7S2ZHN7_9RHOD3.450e-637.78Hypothetical protein n=1 Tax=Rhodosorus marinus Ta... [more]
A0A7S2ZI63_9RHOD4.070e-637.78Hypothetical protein n=5 Tax=Rhodosorus marinus Ta... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D3.40.395.10Adenoviral Proteinase; Chain Acoord: 408..502
e-value: 1.8E-9
score: 39.3
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 43..146
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 176..262
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 50..81
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 199..213
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 226..258
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 485..507
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 102..122
IPR038765Papain-like cysteine peptidase superfamilySUPERFAMILY54001Cysteine proteinasescoord: 420..481

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00004382_piloncontigtig00004382_pilon:515868..517515 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria chilensis NLEC103_M9 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gchil3152.t1Gchil3152.t1Gracilaria chilensis NLEC103_M9 malemRNAtig00004382_pilon 515868..517515 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gchil3152.t1 ID=Gchil3152.t1|Name=Gchil3152.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=polypeptide|length=508bp
MPVFTFFKALSAGVQETLNRVKDTVSAFSDTVCTGAAEVVHHISPRKRRR
SSSASAGSLPATPAPLPTSSSLRSSPSVPSQPHAKRPRLATPEIDSSHFP
SPFLPPRVPLSSETPPRPRPSQSRPDQRIEAAITHGLTSTPRSRFLSTPA
RYSSHVPAFDPQRQFFRNTYAGLLRRRHTSEPASAPTKSTPKSIHPTAVR
KSVYKKRFHNTQRHFVSPKVLAKNTRLQPLRQSYPSLQQHRSPRPSQLRS
QQEALEVSVESRPQERSFLRNENLETIPSPATRAEQIANLPPTIAALLRS
DNPLCKKIWKLHKQNIERLASSDQKKRFLELEHFVKWQQLETIKREREQS
RRIFSLRPLLKPLTEEKPQAEQPPHRASHFYENRYWLPPEENWYEDQDDH
AQKERDLSVTVTDPRSAYAPLTDSAVSRLRATLADASNQHSELSRVDGCI
IRGEDLRTLRPNNWLNDEIVNSYMNLLAERTTFARKTKSDENSRPNGHPN
SFVNENE*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR038765Papain-like_cys_pep_sf