Gchil2659.t2 (polypeptide) Gracilaria chilensis NLEC103_M9 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGchil2659.t2
Unique NameGchil2659.t2
Typepolypeptide
OrganismGracilaria chilensis NLEC103_M9 male (Gracilaria chilensis NLEC103_M9 male)
Sequence length127
Homology
BLAST of Gchil2659.t2 vs. uniprot
Match: A0A2V3IMD8_9FLOR (NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 12 n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IMD8_9FLOR)

HSP 1 Score: 201 bits (510), Expect = 4.080e-64
Identity = 92/128 (71.88%), Postives = 100/128 (78.12%), Query Frame = 0
Query:    1 MGHHSCHQIEQDGHNALL--RKETYGRDRWVEYVDDRNPDSSKITSEWHAWLHHIIDEPPTEKPLPKPIYQAEETGNPTGTRDAYVPPHHKLAKNSIGGASEKYESWKPGSEPVRSDVGSGKDVYDLK 126
            MG   C   E    N     + ETYGRDRWVEYVDDRNPDS KIT EWHAWLHH +DEPPT+ PLPKPIYQAEETGNPTGTR+AYVPPHHKLAKNS+G ASEKYESW+PGSE   ++V   KDV DLK
Sbjct:   29 MGTMQCFVGEDKFKNRFFENKNETYGRDRWVEYVDDRNPDSLKITPEWHAWLHHNVDEPPTDHPLPKPIYQAEETGNPTGTREAYVPPHHKLAKNSVGSASEKYESWRPGSEAADTEVDDRKDVLDLK 156          
BLAST of Gchil2659.t2 vs. uniprot
Match: R7QPI6_CHOCR (NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 12 n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QPI6_CHOCR)

HSP 1 Score: 155 bits (392), Expect = 3.920e-46
Identity = 73/130 (56.15%), Postives = 88/130 (67.69%), Query Frame = 0
Query:    1 MGHHSCHQIEQDGHNALL--RKETYGRDRWVEYVDDRNPDSSKITSEWHAWLHHIIDEPPTEKPLPKPIYQAEETGNPTGTRDAYVPPHHKLAKNSIGGASEKYESWKP-GSEPVRSDVGSGKD-VYDLK 126
            MG  SC+  E    N     R ETYGRDRWVEYVD+RNPDS K+  EWHAWLHH  D+ P++ PLP+P+Y+   +GNPTGTRDAYVPPHH+L+K   G ASEKYE+W P G +         +D V DLK
Sbjct:   29 MGTMSCYVGEDTFQNRYFEDRTETYGRDRWVEYVDERNPDSLKVEPEWHAWLHHNTDDAPSQHPLPRPVYEKPSSGNPTGTRDAYVPPHHRLSKKFDGNASEKYETWAPQGRKKAEGGKPDSEDKVLDLK 158          
BLAST of Gchil2659.t2 vs. uniprot
Match: M2Y2Q1_GALSU (NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 12 n=1 Tax=Galdieria sulphuraria TaxID=130081 RepID=M2Y2Q1_GALSU)

HSP 1 Score: 102 bits (255), Expect = 2.860e-25
Identity = 53/131 (40.46%), Postives = 67/131 (51.15%), Query Frame = 0
Query:   10 EQDGHNALLRK--ETYGRDRWVEYVD-DRNPDSSKITSEWHAWLHHIIDEPPTEKPLPKPIYQAEETGNPTGTRDAYVPPHHKLAKNSIGGASEKYESWKPGSEPV-----------RSDVGSGKDVYDLK 126
            E + HN   +K  +   +DRWVEY   D  PD   +  EWHAWLHH IDEPPT  P  +PIYQ +   N TGT DAY P ++ L+KN  G A +K E W                   ++    +DV DLK
Sbjct:   37 EDEFHNRYFQKVNDVMLKDRWVEYASKDFTPDPYSLPPEWHAWLHHSIDEPPTRTPFQRPIYQGQIVANRTGTTDAYFPKNNPLSKNFKGLAKDKLEQWNGNVSTTSVVNRVSRSFRNNETKEERDVLDLK 167          
BLAST of Gchil2659.t2 vs. uniprot
Match: A0A7S3A0X4_9RHOD (NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 12 n=2 Tax=Rhodosorus marinus TaxID=101924 RepID=A0A7S3A0X4_9RHOD)

HSP 1 Score: 99.4 bits (246), Expect = 5.540e-24
Identity = 48/115 (41.74%), Postives = 69/115 (60.00%), Query Frame = 0
Query:   15 NALLRKETYGRDRWVEYVD---DRNPDSSKITSEWHAWLHHIIDEPPTEKPLPKPIYQAEETGNPTGTRDAYVPPHHKLAKNSIGGASEKYESWKPGSEPVRSDVGSGKDVYDLK 126
            NA++     GR+RWVEY         D+ KI +EWH W+H ++DEPP+ +P+  P YQ E  GN +GT+DAY   ++  +K+ +G A  K E W P S+  +  +G  KDV DLK
Sbjct:   53 NAII-----GRERWVEYYGIEKKTGTDALKIPAEWHMWVHRMVDEPPSRRPVEHPKYQGEIEGNLSGTKDAYYSQYYVKSKDFVGRAGSKIEPWNP-SQKRKPLLGPEKDVLDLK 161          
BLAST of Gchil2659.t2 vs. uniprot
Match: W6K702_MAGSQ (Putative NADH-ubiquinone oxidoreductase subunit B17.2 (Complex I-B17.2) (CI-B17.2) n=1 Tax=Magnetospira sp. (strain QH-2) TaxID=1288970 RepID=W6K702_MAGSQ)

HSP 1 Score: 82.8 bits (203), Expect = 5.560e-18
Identity = 40/93 (43.01%), Postives = 55/93 (59.14%), Query Frame = 0
Query:   19 RKETYGRDR-WVEYVDDRNPDSSKITSEWHAWLHHIIDEPPTEKPLPKPIYQAEETGNPTGTRDAYVPPHHKLAKNSIGGASEKYESWKPGSE 110
            RK+  GR+R WV Y   R  ++SK+  EWHAWLHH ++EP T+       +Q E   N TGT+ A+VPP H LA      A+  Y++W PG +
Sbjct:   29 RKKLQGRERRWVLYKGSR--EASKVPPEWHAWLHHTVEEPLTDDASDAAAWQQEHLPNLTGTQFAFVPPGHDLAGGKRSKATGDYQAWTPGED 119          
BLAST of Gchil2659.t2 vs. uniprot
Match: A0A1L9BPX1_9RHOB (NADH dehydrogenase n=3 Tax=Paracoccus TaxID=265 RepID=A0A1L9BPX1_9RHOB)

HSP 1 Score: 82.8 bits (203), Expect = 6.340e-18
Identity = 36/100 (36.00%), Postives = 56/100 (56.00%), Query Frame = 0
Query:    8 QIEQDGHNALLRKETYGRDRWVEYVDDRNPDSSKITSEWHAWLHHIIDEPPTEKPLPKPIYQAEETGNPTGTRDAYVPPHHKLAKNSIGGASEKYESWKP 107
            ++ +DG+  +  K   G+ RWV Y  D   ++S+++ EWH WLHH  +EPPTE P+P+  ++     N TGT DAYVP         +      Y++W+P
Sbjct:   28 KVGEDGNGNIFYKSKDGKRRWVIY--DGEAEASRVSPEWHGWLHHTWNEPPTEVPVPRKAWEQPHKANQTGTLDAYVPAGSLARVQPV--TRSDYDAWQP 123          
BLAST of Gchil2659.t2 vs. uniprot
Match: A0A2H6AZQ4_9BACT (Uncharacterized protein n=1 Tax=bacterium HR40 TaxID=2035435 RepID=A0A2H6AZQ4_9BACT)

HSP 1 Score: 82.8 bits (203), Expect = 7.030e-18
Identity = 33/81 (40.74%), Postives = 48/81 (59.26%), Query Frame = 0
Query:   27 RWVEYVDDRNPDSSKITSEWHAWLHHIIDEPPTEKPLPKPIYQAEETGNPTGTRDAYVPPHHKLAKNSIGGASEKYESWKP 107
            RWV Y  D   ++S +   WHAWLHH++ EPPT  PL +P ++     N +GT +A++PP H L       A+  YE+W+P
Sbjct:   46 RWVIYAGDGEIEASTVPPGWHAWLHHVVAEPPTRLPLRRPFWEKPHLPNRSGTAEAWLPPGHPLRGGKRPPATGDYEAWRP 126          
BLAST of Gchil2659.t2 vs. uniprot
Match: A0A3M1G158_9PROT (NADH:ubiquinone oxidoreductase subunit NDUFA12 n=1 Tax=Alphaproteobacteria bacterium TaxID=1913988 RepID=A0A3M1G158_9PROT)

HSP 1 Score: 80.5 bits (197), Expect = 5.210e-17
Identity = 37/100 (37.00%), Postives = 57/100 (57.00%), Query Frame = 0
Query:    8 QIEQDGHNALLRKETYGRDRWVEYVDDRNPDSSKITSEWHAWLHHIIDEPPTEKPLPKPIYQAEETGNPTGTRDAYVPPHHKLAKNSIGGASEKYESWKP 107
            ++ +D    +  +E  GR RWV Y  +   ++S+I  EWHAWLH ++D PP+E+PLP+  ++     N TGT  AY PP       +   A+  YE+W+P
Sbjct:   28 RVGEDEDGNVYYREKGGRRRWVIYNGEI--EASRIAPEWHAWLHGLVDVPPSEQPLPRKQWEKPHRPNATGTEAAYYPPGSLHTAAARARATGDYEAWRP 125          
BLAST of Gchil2659.t2 vs. uniprot
Match: A0A7V2WXE1_9PROT (NADH:ubiquinone oxidoreductase subunit NDUFA12 n=1 Tax=Rhodospirillales bacterium TaxID=2026786 RepID=A0A7V2WXE1_9PROT)

HSP 1 Score: 80.1 bits (196), Expect = 9.970e-17
Identity = 31/81 (38.27%), Postives = 49/81 (60.49%), Query Frame = 0
Query:   27 RWVEYVDDRNPDSSKITSEWHAWLHHIIDEPPTEKPLPKPIYQAEETGNPTGTRDAYVPPHHKLAKNSIGGASEKYESWKP 107
            RWV Y  +   + S +   W+AWLHH +++PP+E+PLP   ++     NP+GT +A++PP H+L       A+  YE W+P
Sbjct:   54 RWVVYAGEGEIEPSTVPPGWNAWLHHTVEKPPSERPLPVKYWEKPHRPNPSGTAEAWLPPGHQLRGGRRPRATGDYEPWRP 134          
BLAST of Gchil2659.t2 vs. uniprot
Match: A0A2R8AB56_9RHOB (Uncharacterized protein n=1 Tax=Pontivivens insulae TaxID=1639689 RepID=A0A2R8AB56_9RHOB)

HSP 1 Score: 79.7 bits (195), Expect = 1.070e-16
Identity = 36/100 (36.00%), Postives = 54/100 (54.00%), Query Frame = 0
Query:    8 QIEQDGHNALLRKETYGRDRWVEYVDDRNPDSSKITSEWHAWLHHIIDEPPTEKPLPKPIYQAEETGNPTGTRDAYVPPHHKLAKNSIGGASEKYESWKP 107
            ++ +D    +  + + G  RWV Y  D   ++S+++ EWH WLHH  D+PPTE PLP+  ++     N TGT  AY PP   L   +       YE+W+P
Sbjct:   28 KVGEDAQGNVYMQTSDGARRWVMYNGDM--EASRVSPEWHGWLHHTFDQPPTEAPLPRKDWEKPHLENMTGTALAYRPPGSILTPETRPQRRGDYEAWQP 125          
The following BLAST results are available for this feature:
BLAST of Gchil2659.t2 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2V3IMD8_9FLOR4.080e-6471.88NADH dehydrogenase [ubiquinone] 1 alpha subcomplex... [more]
R7QPI6_CHOCR3.920e-4656.15NADH dehydrogenase [ubiquinone] 1 alpha subcomplex... [more]
M2Y2Q1_GALSU2.860e-2540.46NADH dehydrogenase [ubiquinone] 1 alpha subcomplex... [more]
A0A7S3A0X4_9RHOD5.540e-2441.74NADH dehydrogenase [ubiquinone] 1 alpha subcomplex... [more]
W6K702_MAGSQ5.560e-1843.01Putative NADH-ubiquinone oxidoreductase subunit B1... [more]
A0A1L9BPX1_9RHOB6.340e-1836.00NADH dehydrogenase n=3 Tax=Paracoccus TaxID=265 Re... [more]
A0A2H6AZQ4_9BACT7.030e-1840.74Uncharacterized protein n=1 Tax=bacterium HR40 Tax... [more]
A0A3M1G158_9PROT5.210e-1737.00NADH:ubiquinone oxidoreductase subunit NDUFA12 n=1... [more]
A0A7V2WXE1_9PROT9.970e-1738.27NADH:ubiquinone oxidoreductase subunit NDUFA12 n=1... [more]
A0A2R8AB56_9RHOB1.070e-1636.00Uncharacterized protein n=1 Tax=Pontivivens insula... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR007763NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 12PFAMPF05071NDUFA12coord: 21..107
e-value: 9.0E-20
score: 71.5
IPR007763NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 12PANTHERPTHR12910NADH-UBIQUINONE OXIDOREDUCTASE SUBUNIT B17.2coord: 20..110
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 60..126
NoneNo IPR availablePANTHERPTHR12910:SF2NADH DEHYDROGENASE [UBIQUINONE] 1 ALPHA SUBCOMPLEX SUBUNIT 12coord: 20..110

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00004400_piloncontigtig00004400_pilon:2227579..2228079 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria chilensis NLEC103_M9 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gchil2659.t2Gchil2659.t2Gracilaria chilensis NLEC103_M9 malemRNAtig00004400_pilon 2227579..2228079 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gchil2659.t2 ID=Gchil2659.t2|Name=Gchil2659.t2|organism=Gracilaria chilensis NLEC103_M9 male|type=polypeptide|length=127bp
MGHHSCHQIEQDGHNALLRKETYGRDRWVEYVDDRNPDSSKITSEWHAWL
HHIIDEPPTEKPLPKPIYQAEETGNPTGTRDAYVPPHHKLAKNSIGGASE
KYESWKPGSEPVRSDVGSGKDVYDLK*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR007763NDUFA12