Gchil1830.t1 (polypeptide) Gracilaria chilensis NLEC103_M9 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGchil1830.t1
Unique NameGchil1830.t1
Typepolypeptide
OrganismGracilaria chilensis NLEC103_M9 male (Gracilaria chilensis NLEC103_M9 male)
Sequence length240
Homology
BLAST of Gchil1830.t1 vs. uniprot
Match: A0A2V3IRZ3_9FLOR (Putative plastid-lipid-associated protein 7, chloroplastic n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IRZ3_9FLOR)

HSP 1 Score: 253 bits (645), Expect = 1.740e-81
Identity = 137/239 (57.32%), Postives = 171/239 (71.55%), Query Frame = 0
Query:    3 TFVLPFFGPSRNLT-PKS----HPFQESSACTLRGPRTSVLLCSADTTAVSNLRQQIDTIAGSDRGIFGLEQHQRDTLDSFIKDLECNNPNPNPTSHDAKAAAGSWRLLYTTLEILGRKRVRLAISSPRKPGLVKLGNFFQFIDPSNRQSKNVVEFKLLTGASGTFTITAEYHVVSRVRVNVSTTATALEPPSFEALLGSNMPLLTQIFNPDGYLDITYLDESLRVGRDSKGHIFVLER 236
            +F+ PF   + N + P++    HP +     T R  R  V+LCSA T  V++L+ QI +IAG DRGIFGL+   R  LDS I+ LE   P  NPT+ DA+ AAG WRLLYTTLEILG+ R+RLAI S RK GLVKLG+FFQ IDP NRQS+N++EFK+LTG  GTFTI+A Y VV   RV V  T +AL+P + EALLG N+ LLT IFNPDG+LDITY+D+ LR+GRD KG +FVLE+
Sbjct:    5 SFITPFHQIACNPSLPRADLFKHPERFQRLSTPRCRR--VILCSATTANVAHLKSQIASIAGEDRGIFGLDGDDRVELDSLIQALERQTPCSNPTADDARVAAGRWRLLYTTLEILGKNRIRLAIGSSRKSGLVKLGDFFQLIDPDNRQSRNLIEFKVLTGTRGTFTISATYSVVGPKRVRVYMTDSALQPQALEALLGENISLLTNIFNPDGFLDITYVDDELRIGRDDKGKVFVLEK 241          
BLAST of Gchil1830.t1 vs. uniprot
Match: R7Q7V7_CHOCR (PAP_fibrillin domain-containing protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7Q7V7_CHOCR)

HSP 1 Score: 244 bits (623), Expect = 3.210e-78
Identity = 115/199 (57.79%), Postives = 152/199 (76.38%), Query Frame = 0
Query:   40 CSADTTAVSNLRQQIDTIAGSDRGIFGLEQHQRDTLDSFIKDLECNNPNPNPTSHDAKAAAGSWRLLYTTLEILGRKRVRLAISSPRKPGLVKLGNFFQFIDPSNRQSKNVVEFKLLTGASGTFTITAEYHVVSRVRVNVSTTATALEPPSFEALLGSNMPLLTQIFNPDGYLDITYLDESLRVGRDSKGHIFVLERAQ 238
            CSA T   + L+ +I+ +AG  RGIFG+E  QR+  +  I+ +E  NP   PT+++A AA G WRLLYT LEILGR+RV+LAI++ RKPG VKLG+FFQ +DP+ R SKNVVEF++LTG +GTFT+ AEY  +S+ RV V TT   LEP + E LLG N  LLTQIFNP+G+LDIT++DES+R+GRD+KGH+FVLE+ +
Sbjct:   40 CSAMTAEKARLKLEIENVAGEQRGIFGMEDDQREAFERLIQAVEAINPVTEPTANNAAAAGGKWRLLYTNLEILGRRRVKLAIATERKPGFVKLGDFFQVVDPATRVSKNVVEFRILTGGTGTFTVCAEYEAISKTRVEVRTTGAGLEPKALEELLGENKTLLTQIFNPEGFLDITFVDESMRIGRDNKGHVFVLEKCE 238          
BLAST of Gchil1830.t1 vs. uniprot
Match: A0A7S0G4C6_9RHOD (Hypothetical protein n=1 Tax=Rhodosorus marinus TaxID=101924 RepID=A0A7S0G4C6_9RHOD)

HSP 1 Score: 183 bits (464), Expect = 2.930e-54
Identity = 102/227 (44.93%), Postives = 147/227 (64.76%), Query Frame = 0
Query:   21 PFQESSACTLRGP-----RTSVLLCSADTTAV-----SNLRQQIDTIAGSDRGIFGLEQHQRDTLDSFIKDLECNNPNPNPTSHDAKAAAGSWRLLYTTLEILGRKRVRLAISSPRKPGLVKLGNFFQFIDPSNRQSKNVVEFKLLTGASGTFTITAEYHVVSRVRVNVSTTATALEPPSFEALLGSNMPLLTQIFNPDGYLDITYLDESLRVGRDSKGHIFVLERA 237
            P++ES  C  RG      R  ++  SAD   +       L +++ T+AG DRGIFG+E   RD +   + ++E   P+  PTS      AG WR+LYT+L ILG +R +LA+S+ +KPGLV+LG+ +Q I P ++ + N VEF ++   +GTFT+TA Y V S  RV V+   + L P   E LLG+N+ LLT+IFNP+G+LDIT++D++LR+GRD K +IFVLERA
Sbjct:    8 PWRES-ICHSRGRVFECRRRCIMRGSADDHGLREQVKKQLIERVHTLAGPDRGIFGMEGEDRDRVHELLAEVERMTPHLEPTSVIDSVVAGDWRVLYTSLTILGARRTKLALSTSKKPGLVELGDIYQSIQPESKVATNKVEFSVMK-VTGTFTVTATYEVESDTRVGVTFQNSELMPAMLEKLLGNNLGLLTEIFNPEGHLDITFVDDTLRIGRDHKDNIFVLERA 232          
BLAST of Gchil1830.t1 vs. uniprot
Match: A0A1X6NVB6_PORUM (PAP_fibrillin domain-containing protein n=1 Tax=Porphyra umbilicalis TaxID=2786 RepID=A0A1X6NVB6_PORUM)

HSP 1 Score: 176 bits (445), Expect = 5.780e-51
Identity = 105/257 (40.86%), Postives = 148/257 (57.59%), Query Frame = 0
Query:    1 MITFVLPFFGP-----------SRNLTPKSHPFQE--------SSACTLRGPRTSVLLCSADTTAVSNLRQQIDTIA--GSDRGIFGLEQHQRDTLDSFIKDLECNNPNPNPTSHDAKAAAGSWRLLYTTLEILGRKRVRLAISSPRKPGLVKLGNFFQFIDPSNRQSKNVVEFKLLTGASGTFTITAEYHVVSRVRVNVSTTATALEPPSFEALLGSNMPLLTQIFNPDGYLDITYLDESLRVGRDSKGHIFVLER 236
            +ITFV P  GP            R   P + PF          ++A ++R PR S+ +  A+  A+      +D IA  G DRGIFG+E   R  +D+    LE   P   P  H +    G WRLLYTTL ILGR+R +L++S+  K G V LG  +Q +  ++  +++VV+F++L    G F+ITA Y  +S  RV V+ T + LEPP    +LG N+ LLTQIF+P G+LDITYLD++ R+GRD KG +FVLE+
Sbjct:    2 VITFVRPLAGPLPLHSVRSREGGRTRPPAALPFHRRAAAPVVPATAASVR-PRCSLAIPVAERAAL------LDAIAAVGPDRGIFGVESATRSRIDALAAALEAATPTAAPVEHLSGLVDGRWRLLYTTLTILGRRRSQLSLSTAAKSGFVTLGELYQNVAVADAVAESVVQFRVLGRVEGAFSITATYTPLSGTRVGVAATGSTLEPPGLAKMLGDNVGLLTQIFDPTGWLDITYLDDAYRLGRDGKGRLFVLEK 251          
BLAST of Gchil1830.t1 vs. uniprot
Match: UPI00125D6B80 (fibrillin-5, chloroplastic isoform X1 n=4 Tax=Ipomoea TaxID=4119 RepID=UPI00125D6B80)

HSP 1 Score: 151 bits (381), Expect = 2.250e-41
Identity = 86/237 (36.29%), Postives = 138/237 (58.23%), Query Frame = 0
Query:    7 PFFGPSRNLTPK--SHPFQESSACTLRGPRTSVLLCSADTTAVSNLRQQI-DTIAGSDRGIFGLEQHQRDTLDSFIKDLECNNPNPNPTSHDAKAAAGSWRLLYTTLEILGRKRVRLAISSPRKPGLVKLGNFFQFIDPSNRQSKNVVEFKL--LTGASGTFTITAEYHVVSRVRVNVSTTATALEPPSFEALLGSNMPLLTQIFNPDGYLDITYLDESLRVGRDSKGHIFVLERAQ 238
            P F P+  ++ K  S   Q  +  +++  + SV +  +D   VS ++  + D   G +RGIFG+   +++ ++  +  LE  NP P PT    K A GSW+L+Y+T+ ILG +R +L +       L+ LG+FFQ ID +  ++ NV+EF    L   SG   I A +++ S  RV++S  ++ + P     +   N  LL  IFNPDG+L+ITYLD++LR+GRD KG+ F+LER++
Sbjct:   32 PLFSPTHCISKKKSSRFGQRVATSSIKSAQQSVGMSGSDFLTVSQIKDGLFDAFRGMNRGIFGVPSEKKNRIEELVMLLESQNPTPEPTLCLDKVA-GSWKLVYSTITILGSRRTKLGLRD-----LISLGDFFQNIDVAQGKAVNVIEFSARGLNFLSGQLRIEASFNIASNSRVDISYNSSTITPDKLMNVFRKNYDLLLGIFNPDGWLEITYLDDNLRIGRDDKGNTFILERSE 262          
BLAST of Gchil1830.t1 vs. uniprot
Match: A0A833RNT7_9POAL (Structural molecule n=1 Tax=Carex littledalei TaxID=544730 RepID=A0A833RNT7_9POAL)

HSP 1 Score: 148 bits (374), Expect = 1.390e-40
Identity = 80/211 (37.91%), Postives = 124/211 (58.77%), Query Frame = 0
Query:   36 SVLLCSADTTAVSNLRQQIDT-------IAGSDRGIFGLEQHQRDTLDSFIKDLECNNPNPNPTSHDAKAAAGSWRLLYTTLEILGRKRVRLAISSPRKPGLVKLGNFFQFIDPSNRQSKNVVEFKL--LTGASGTFTITAEYHVVSRVRVNVSTTATALEPPSFEALLGSNMPLLTQIFNPDGYLDITYLDESLRVGRDSKGHIFVLERA 237
            SV   SA+T+     +   D        + G DRGIFG++  ++  ++  ++ LE  NP P PT+       G W+L+Y+T+ ILG KR +L +      G + LG+FFQ I+ S  ++ NV++F     +  SG   I A Y + S+ RV+++  ++++ P     L   N  LL +IFNP+G+L+ITY+DESLR+GRD KG+IFVLER+
Sbjct:   36 SVRASSANTSITGEYKNANDVKIALYQALEGVDRGIFGIKSAKKSEIEGLVEMLESQNPTPEPTTQLQDKVDGGWKLVYSTITILGSKRTKLGLR-----GFIDLGDFFQIINVSEEKAVNVIKFNARGFSMLSGQLKIVASYKISSKSRVDITLESSSITPDQLMGLFEKNYDLLLKIFNPEGWLEITYVDESLRIGRDDKGNIFVLERS 241          
BLAST of Gchil1830.t1 vs. uniprot
Match: A0A2I0W3T6_9ASPA (Putative plastid-lipid-associated protein 7, chloroplastic n=1 Tax=Dendrobium catenatum TaxID=906689 RepID=A0A2I0W3T6_9ASPA)

HSP 1 Score: 148 bits (373), Expect = 3.260e-40
Identity = 91/236 (38.56%), Postives = 127/236 (53.81%), Query Frame = 0
Query:    6 LPFFGPSRNLTPKSHPFQESSACTLRGPRTSVLLCSADTTAVSNLRQQIDTIAGSDRGIFGLEQHQRDTLDSFIKDLECNNPNPNPTSHDAKAAAGSWRLLYTTLEILGRKRVRLAISSPRKPGLVKLGNFFQFIDPSNRQSKNVVEF-----KLLTGASGTFTITAEYHVVSRVRVNVSTTATALEPPSFEALLGSNMPLLTQIFNPDGYLDITYLDESLRVGRDSKGHIFVLER 236
            LP  G  R L  K  P   +S  +   P T V   + D  A   L  Q     G++RG+FGL   ++  +++ ++ LE   P PNPT H      G W+L+Y+T+ ILG KR +L +        + LG+ +Q ID +  ++ NV+ F     KLLTG     TI A Y + S+ RVN+    + + P     L   N  LL +IFNP G+LDITY+D+SLR+GRD KG IFVLER
Sbjct:   38 LPSSGRRRCLWAKQVPMAGASEAS---PGTGVYKTTEDIKAELYLALQ-----GTNRGVFGLTSTKKLKIETLVEQLESRTPTPNPTDHLQSKVDGCWKLIYSTITILGSKRTKLGLRD-----FISLGDLYQTIDVAKGRAINVINFNAKGLKLLTGQ---LTIEASYTIASKTRVNIKLENSIITPDQLMNLFQKNYDLLIEIFNPAGWLDITYIDDSLRIGRDDKGTIFVLER 257          
BLAST of Gchil1830.t1 vs. uniprot
Match: K3Y9F9_SETIT (PAP_fibrillin domain-containing protein n=2 Tax=Setaria TaxID=4554 RepID=K3Y9F9_SETIT)

HSP 1 Score: 146 bits (368), Expect = 1.960e-39
Identity = 76/181 (41.99%), Postives = 109/181 (60.22%), Query Frame = 0
Query:   59 GSDRGIFGLEQHQRDTLDSFIKDLECNNPNPNPTSHDAKAAAGSWRLLYTTLEILGRKRVRLAISSPRKPGLVKLGNFFQFIDPSNRQSKNVVEF--KLLTGASGTFTITAEYHVVSRVRVNVSTTATALEPPSFEALLGSNMPLLTQIFNPDGYLDITYLDESLRVGRDSKGHIFVLERA 237
            G DRGIFG+   QR  +   ++ LE  NP P PT+       G W+L+Y+T+ ILG+KR +L +        + LG+F Q ID    ++ NV++F  + L   SG FTI A Y V S+ RV++   ++ + P     +   N  +L  IFNP+G+L+ITY+DESLR+GRD K +IFVLERA
Sbjct:   86 GVDRGIFGMTSAQRSEIHGLVELLEARNPTPEPTAALQDKVDGCWKLIYSTISILGKKRTKLGLRD-----FISLGDFLQIIDVKEEKAVNVIKFSARALKILSGKFTIEASYSVTSKTRVDIKLESSTITPEQLMNIFQKNYDMLLAIFNPEGWLEITYVDESLRIGRDDKENIFVLERA 261          
BLAST of Gchil1830.t1 vs. uniprot
Match: A0A835UN73_VANPL (PAP_fibrillin domain-containing protein n=2 Tax=Vanilla planifolia TaxID=51239 RepID=A0A835UN73_VANPL)

HSP 1 Score: 146 bits (369), Expect = 2.000e-39
Identity = 73/184 (39.67%), Postives = 111/184 (60.33%), Query Frame = 0
Query:   57 IAGSDRGIFGLEQHQRDTLDSFIKDLECNNPNPNPTSHDAKAAAGSWRLLYTTLEILGRKRVRLAISSPRKPGLVKLGNFFQFIDPSNRQSKNVVEF--KLLTGASGTFTITAEYHVVSRVRVNVSTTATALEPPSFEALLGSNMPLLTQIFNPDGYLDITYLDESLRVGRDSKGHIFVLERAQ 238
            + GS RG+FG++  ++  ++  +  LE  NP PNPT H      G W+L+Y+T+ ILG KR +L +        + LG+ +Q ID    ++KNV+ F  K +   +G   I A Y + S+ RVN+    +++ P  F  L   N  LL  IFNP+G+L+ITY+DE +R+GRD KG+IFV+ERA+
Sbjct:   96 LQGSFRGVFGVKSAEKLEIEELVMKLESRNPTPNPTDHLMDKVHGCWKLIYSTVVILGSKRTKLGLRD-----FINLGDIYQIIDVEKAKAKNVINFNAKGIKSLTGQLIIEALYRIASKTRVNIELENSSITPAQFMCLFQKNYDLLIAIFNPEGWLEITYVDEFMRIGRDDKGNIFVMERAE 274          
BLAST of Gchil1830.t1 vs. uniprot
Match: A0A4S8IHV2_MUSBA (PAP_fibrillin domain-containing protein n=3 Tax=Musa TaxID=4640 RepID=A0A4S8IHV2_MUSBA)

HSP 1 Score: 146 bits (368), Expect = 2.120e-39
Identity = 75/182 (41.21%), Postives = 108/182 (59.34%), Query Frame = 0
Query:   57 IAGSDRGIFGLEQHQRDTLDSFIKDLECNNPNPNPTSHDAKAAAGSWRLLYTTLEILGRKRVRLAISSPRKPGLVKLGNFFQFIDPSNRQSKNVVEFKL--LTGASGTFTITAEYHVVSRVRVNVSTTATALEPPSFEALLGSNMPLLTQIFNPDGYLDITYLDESLRVGRDSKGHIFVLER 236
            + G DRGIFG    ++  +  F++ LE  NP P PT H      G W+L+Y+T+ ILG  R +L +        + LG+FFQ ID +  ++ NV++F L  L   SG  TI A Y + S+ RV++    + + P     +   N+ LL  IFNP G+L+ITY+DES+R+GRD KG+IFVLER
Sbjct:   87 LTGIDRGIFGATSWKKSEIAGFVELLESRNPTPYPTDHLPDKVDGCWKLVYSTISILGSTRTKLGLRD-----FISLGDFFQIIDVAKEKATNVIKFNLRGLQLLSGQLTIEASYRIASKTRVDIKLERSNITPDQLMKIFEKNLDLLLAIFNPQGWLEITYVDESMRIGRDDKGNIFVLER 263          
The following BLAST results are available for this feature:
BLAST of Gchil1830.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2V3IRZ3_9FLOR1.740e-8157.32Putative plastid-lipid-associated protein 7, chlor... [more]
R7Q7V7_CHOCR3.210e-7857.79PAP_fibrillin domain-containing protein n=1 Tax=Ch... [more]
A0A7S0G4C6_9RHOD2.930e-5444.93Hypothetical protein n=1 Tax=Rhodosorus marinus Ta... [more]
A0A1X6NVB6_PORUM5.780e-5140.86PAP_fibrillin domain-containing protein n=1 Tax=Po... [more]
UPI00125D6B802.250e-4136.29fibrillin-5, chloroplastic isoform X1 n=4 Tax=Ipom... [more]
A0A833RNT7_9POAL1.390e-4037.91Structural molecule n=1 Tax=Carex littledalei TaxI... [more]
A0A2I0W3T6_9ASPA3.260e-4038.56Putative plastid-lipid-associated protein 7, chlor... [more]
K3Y9F9_SETIT1.960e-3941.99PAP_fibrillin domain-containing protein n=2 Tax=Se... [more]
A0A835UN73_VANPL2.000e-3939.67PAP_fibrillin domain-containing protein n=2 Tax=Va... [more]
A0A4S8IHV2_MUSBA2.120e-3941.21PAP_fibrillin domain-containing protein n=3 Tax=Mu... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR006843Plastid lipid-associated protein/fibrillin conserved domainPFAMPF04755PAP_fibrillincoord: 53..234
e-value: 8.4E-28
score: 97.7
NoneNo IPR availablePANTHERPTHR31906:SF4FIBRILLIN-5, CHLOROPLASTICcoord: 42..238
IPR039633Plastid-lipid-associated proteinPANTHERPTHR31906FAMILY NOT NAMEDcoord: 42..238

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00004403_piloncontigtig00004403_pilon:2812219..2812938 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria chilensis NLEC103_M9 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gchil1830.t1Gchil1830.t1Gracilaria chilensis NLEC103_M9 malemRNAtig00004403_pilon 2812219..2812938 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gchil1830.t1 ID=Gchil1830.t1|Name=Gchil1830.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=polypeptide|length=240bp
MITFVLPFFGPSRNLTPKSHPFQESSACTLRGPRTSVLLCSADTTAVSNL
RQQIDTIAGSDRGIFGLEQHQRDTLDSFIKDLECNNPNPNPTSHDAKAAA
GSWRLLYTTLEILGRKRVRLAISSPRKPGLVKLGNFFQFIDPSNRQSKNV
VEFKLLTGASGTFTITAEYHVVSRVRVNVSTTATALEPPSFEALLGSNMP
LLTQIFNPDGYLDITYLDESLRVGRDSKGHIFVLERAQV*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR006843PAP/fibrillin_dom
IPR039633PAP