Gchil1761.t1 (polypeptide) Gracilaria chilensis NLEC103_M9 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGchil1761.t1
Unique NameGchil1761.t1
Typepolypeptide
OrganismGracilaria chilensis NLEC103_M9 male (Gracilaria chilensis NLEC103_M9 male)
Sequence length272
Homology
BLAST of Gchil1761.t1 vs. uniprot
Match: A0A2V3IW27_9FLOR (Programmed cell death protein 2 n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IW27_9FLOR)

HSP 1 Score: 160 bits (404), Expect = 1.060e-42
Identity = 100/315 (31.75%), Postives = 135/315 (42.86%), Query Frame = 0
Query:    1 MRCPSCRDVVYCGRACQLVHWRSDHHALPADAXXXXXXXXXXXDASTLRFREVRIVTDVHP-----DVSDDSSSAXXXXXXXXXXXXXXXXXXXXXXQHEHSVDQPQQQPPPH--------------------------------------------GTFQDADEHELPEELFHART-RDTDHTYKRFARVVAAAPHQVIRYERGGVPLWGAAARQCEQPPTCERCGAARVFELQLMPQLLYFVCGAGRVRTACARRDAAIQTKKTTXXXXXXXXTLELDDDDDIDLDWLTVCIFCCERSCGGDAPYVREFAWLQ 265
            MRC  CR ++YCGR CQ+ HW++ H +                  S LRF EV IVTD HP     D+ DD                            +H+ +    +PP H                                            GTFQDADE ELPE+LF  R  R  D  +++F+RVV+ AP QV+RY  GG  LWG  + QC   P CE CG+ R+FE+Q+MPQL+Y++    +      R    ++                       D+DW+T+C++ CE+SC  D  YV EFAWLQ
Sbjct:  141 MRCGGCRKLMYCGRLCQMRHWKNGHKSSCGQPMQNASDLF-----SALRFSEVEIVTDNHPRMPASDIDDDDEDERSNDELETNQLDQPDTPIAST---KHNANHRSTKPPKHSSPDVSNQTIDQSSLKPSNNNASCLLSESPQSSTHTSVIEPEIKGTFQDADEEELPEDLFEPRPGRVKDPVFEKFSRVVSYAPDQVVRYHHGGQELWGCKSNQCHSVPDCELCGSKRIFEMQVMPQLVYYIAEPDKNNATIKRVAERLRD----------------------DMDWITICVYTCEKSCTADDAYVPEFAWLQ 425          
BLAST of Gchil1761.t1 vs. uniprot
Match: R7Q4A2_CHOCR (Programmed cell death protein 2 n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7Q4A2_CHOCR)

HSP 1 Score: 119 bits (297), Expect = 5.660e-28
Identity = 111/294 (37.76%), Postives = 135/294 (45.92%), Query Frame = 0
Query:    2 RCPSCRDVVYCGRACQLVHWRSDHHALPADAXXXXXXXXXXXDASTLRFREVRIVTDVHP--DVSDD--------------SSSAXXXXXXXXXXXXXXXXXXXXXXQHEH----------SVDQPQQQPPPHGTFQDADEHELPEELFHARTRD---TDHTYKRFARVVAAAPHQVIRYERGGVPLWGAAARQCEQPPTCERCGAARVFELQLMPQLLYFVCGAGRVRTACARRDAAIQTKKTTXXXXXXXXTLELDDDDDIDLDWLTVCIFCCERSCGGDAPYVREFAWLQS 266
            RC  C  V YC RACQL  W+  H    A                  R RE+ IVT+ HP  D SDD              S +     XXXXXXXXXXXXXXXXXX H            +VD+     P  GTFQDAD  ELPEE+F  R R     D +   F RVV  A  QV+RYE  G+ LW A   +C +   C+RCGA RVFE+Q+MPQL ++V           R D A  T +                     ++W T+ ++ C RSC     Y RE AW Q+
Sbjct:   60 RCAQCHRVSYCARACQLQDWKLGHKDECAGGVTKDDMDARRVKC---RLREMEIVTEQHPTPDTSDDEDDSEGEDAHVETLSPNGDASEXXXXXXXXXXXXXXXXXXXHPSGTVTRVSTAVNVDEM----PVRGTFQDADGDELPEEIFRGRGRGLGANDASTSHFQRVVGYASSQVVRYEWDGLALWAARGGRCGEAGACQRCGAPRVFEMQVMPQLAWYV-----------RHDDARATIEAVAERLRDG------------MEWATIAVYSCSRSCPLGDVYAREMAWAQA 323          
BLAST of Gchil1761.t1 vs. uniprot
Match: A0A2C9JHM2_BIOGL (MYND-type domain-containing protein n=1 Tax=Biomphalaria glabrata TaxID=6526 RepID=A0A2C9JHM2_BIOGL)

HSP 1 Score: 88.6 bits (218), Expect = 1.400e-16
Identity = 77/268 (28.73%), Postives = 110/268 (41.04%), Query Frame = 0
Query:    2 RCPSCRDVVYCGRACQLVHWRSDHHALPADAXXXXXXXXXXXDASTLRFREVRIVTDVHPDVSDDSSSAXXXXXXXXXXXXXXXXXXXXXXQHEHSVDQPQQQPPPHGTFQDADEHELPEELFHARTRDT--DHTYKRFARVVAAAPHQVIRYERGGVPLWGAAARQCEQP--PTCERCGAARVFELQLMPQLLYFVCGAGRVRTACARRDAAIQTKKTTXXXXXXXXTLELDDDDDIDLDWLTVCIFCCERSCGGDAPYVREFAWLQ 265
            +C  C+   YC +  QL  W++ H                   AS L F+E  +VT+       DS+++                      ++E  +  PQ Q    G +Q        EEL  + T +T  D  + +F R + + P QV+RYER GVPLW ++  Q  Q   P+C  CGA R+FE Q+MPQLL ++        A  R DA+                          LDW T+CI+ C+ SC     Y  EF W Q
Sbjct:  153 KCSQCKRTPYCSKEHQLFDWKAGHK----QTCSQESEKEDYKSASGLLFKEFELVTEEEEYSEGDSNNSKSEEERLM--------------EYERLMRSPQLQGL-EGKYQ-------AEELEKSATAETEDDKIFLKFKRRIGSEPTQVLRYERCGVPLWVSSTHQPTQSDIPSCS-CGAPRIFEFQVMPQLLNYL--------AVDRLDAS--------------------------LDWGTLCIYTCKNSCSIGNMYKEEFLWKQ 359          
BLAST of Gchil1761.t1 vs. uniprot
Match: A0A8J4XZG5_CHIOP (Programmed cell death protein 2 n=1 Tax=Chionoecetes opilio TaxID=41210 RepID=A0A8J4XZG5_CHIOP)

HSP 1 Score: 86.3 bits (212), Expect = 8.780e-16
Identity = 51/160 (31.87%), Postives = 76/160 (47.50%), Query Frame = 0
Query:  110 TFQDADEHELPEELFHARTRDTDHTYKRFARVVAAAPHQVIRYERGGVPLWGAAARQCEQPPTCERCGAARVFELQLMPQLLYFVCGAGRVRTACARRDAAIQTKKTTXXXXXXXXTLELDDDDDIDLDWLTVCIFCCERSCGGDAPYVREFAWLQSGVP 269
            T QD D+ +   +L +  T++TD  +++F   +   P Q++RY+RGG PLW +++ +  Q P C  CGA R FE Q+MPQLL  +           + D+A Q+                       LDW TV ++ C  SC  D PY+ E    Q   P
Sbjct:  228 TQQDDDDSDTETDLVNMATKETDKQFQKFRTRIKDYPDQILRYDRGGEPLWVSSSDKGTQVPDCPACGAPRQFEFQVMPQLLVHL-----------KVDSAGQS-----------------------LDWGTVLVYSCTHSCLQDRPYLEELVLKQDYAP 353          
BLAST of Gchil1761.t1 vs. uniprot
Match: A0A6A4TDP7_SCOMX (MYND-type domain-containing protein n=6 Tax=Scophthalmus maximus TaxID=52904 RepID=A0A6A4TDP7_SCOMX)

HSP 1 Score: 85.5 bits (210), Expect = 1.760e-15
Identity = 74/272 (27.21%), Postives = 101/272 (37.13%), Query Frame = 0
Query:    3 CPSCRDVVYCGRACQLVHWRSDHHALPADAXXXXXXXXXXXDASTLRFREVRIVTDVHPDVSDDSSSAXXXXXXXXXXXXXXXXXXXXXXQHEHSVDQPQQQPPPHGTFQDADEHELPEELFHARTRDTDHTYKRFARVVAAAPHQVIRYERGGVPLWGAAAR--QCEQPPTCERCGAARVFELQLMPQLLYFVCGAGRVRTACARRDAAIQTKKTTXXXXXXXXTLELDDDDDIDLDWLTVCIFCCERSCGGDAPYVREFAWLQSGVP-QH 271
            C  C  V YCG+  Q +HW+  H                    STL F E  +VT+   +  +D +                          +  VD P        T  + D     EE+    T+D    ++RF + +A  PHQV+RY RGG P+W ++      +  P C  CGA R FELQ+MPQLL  +C                                   D     +DW T+ I+ C  SC  D  Y +EF W Q   P QH
Sbjct:  155 CSRCHTVTYCGKHHQTLHWKQTHKQ------ECGSQEVSVVTTSTLLFPESELVTEPEEEGKEDDTKEVEGEEEVGSA--------------QRGVDCPSLA----DTLAETDL----EEMAMCETQDNK-VFQRFKKKIAQEPHQVLRYSRGGSPVWVSSQHIPSDQDIPPCT-CGAKRAFELQVMPQLLNSLCV----------------------------------DSTGASIDWGTLAIYTCSASCSHDDQYCQEFIWKQDFSPDQH 362          
BLAST of Gchil1761.t1 vs. uniprot
Match: A0A0S7FU83_9TELE (PDCD2 n=1 Tax=Poeciliopsis prolifica TaxID=188132 RepID=A0A0S7FU83_9TELE)

HSP 1 Score: 83.2 bits (204), Expect = 2.890e-15
Identity = 77/271 (28.41%), Postives = 103/271 (38.01%), Query Frame = 0
Query:    3 CPSCRDVVYCGRACQLVHWRSDHH------ALPADAXXXXXXXXXXXDASTLRFREVRIVTDVHPDVSDDSSSAXXXXXXXXXXXXXXXXXXXXXXQHEHSVDQPQQQPPPHGTFQDADEHELPEELFHARTRDTDHTYKRFARVVAAAPHQVIRYERGGVPLWGAAAR--QCEQPPTCERCGAARVFELQLMPQLLYFVCGAGRVRTACARRDAAIQTKKTTXXXXXXXXTLELDDDDDIDLDWLTVCIFCCERSCGGDAPYVREFAWLQ 265
            C  C  V YCG+  Q VHW+  H       ALP+ +             S   F E  +VT+  P+  ++                          + + S + P        T  +AD   L E   H  T D D  ++RF + +A+ PHQVIRY RGG PLW +++     EQ P C  CGA R FE Q+MPQLL  +C                                   D     +DW TV ++ C  SC     Y  EF W Q
Sbjct:   44 CSRCHTVTYCGKHHQTVHWKHSHKKECLSAALPSAS------------VSPFLFPESELVTE--PEEGEEEGG----------------DAQSGGEEEQKSTEGPSLS----DTLAEAD---LEEMALH-ETED-DKVFQRFKKKIASEPHQVIRYSRGGRPLWVSSSHVPAVEQIPACS-CGANRTFEFQVMPQLLSSLCV----------------------------------DSTGASVDWGTVTVYSCSASCDQGDQYRPEFVWKQ 240          
BLAST of Gchil1761.t1 vs. uniprot
Match: UPI00077AF0BC (programmed cell death protein 2-like n=2 Tax=Acropora TaxID=6127 RepID=UPI00077AF0BC)

HSP 1 Score: 83.2 bits (204), Expect = 1.510e-14
Identity = 75/287 (26.13%), Postives = 110/287 (38.33%), Query Frame = 0
Query:    3 CPSCRDVVYCGRACQLVHWRSDHHALPAD--AXXXXXXXXXXXDASTLRFR------EVRIVTDVHP--DVSDDSSSAXXXXXXXXXXXXXXXXXXXXXXQHEHSVDQPQQQPPPHGTF---QDADEHELPEELFHARTR-DTDHTYKRFARVVAAAPHQVIRYERGGVPLWGAAARQCEQP--PTCERCGAARVFELQLMPQLLYFVCGAGRVRTACARRDAAIQTKKTTXXXXXXXXTLELDDDDDIDLDWLTVCIFCCERSCGGDAPYVREFAWLQ----SGVP 269
            C  C    YCGR  Q + W+S H  +                 + S  RFR      E  +VT+  P  D +DD S                        ++EH V         +GT     D+D+ EL     H +     D  +++F + V+  P QV+RY R G PLW +   +      P C+ CG+ RVFE Q+MPQLL ++      +  C                                +DW T+ I+ C +SCG  + Y+ EF W Q    +G+P
Sbjct:  184 CSKCHMAQYCGREHQTIDWKSGHKGICTQFLCAEEGFDQDQIVEGSNTRFRTKVLFPEYELVTETEPNDDTNDDKSEEEKMN------------------EYEHFVQ--------NGTVLTDSDSDDKELESLANHGKEALIADKQFRKFKKRVSREPKQVLRYHRNGEPLWVSDEGKPSDGDIPVCD-CGSERVFEFQVMPQLLNYL------QVDCIEES----------------------------VDWGTLAIYTCSQSCGDGSAYMTEFLWRQDFADTGIP 409          
BLAST of Gchil1761.t1 vs. uniprot
Match: A0A3B3ZB80_9GOBI (MYND-type domain-containing protein n=2 Tax=Periophthalmus magnuspinnatus TaxID=409849 RepID=A0A3B3ZB80_9GOBI)

HSP 1 Score: 81.3 bits (199), Expect = 5.210e-14
Identity = 72/265 (27.17%), Postives = 102/265 (38.49%), Query Frame = 0
Query:    3 CPSCRDVVYCGRACQLVHWRSDHHALPADAXXXXXXXXXXXDASTLRFREVRIVTDVHPDVSDDSSSAXXXXXXXXXXXXXXXXXXXXXXQHEHSVDQPQQQPPPHGTFQDADEHELPEELFHARTRDTDHTYKRFARVVAAAPHQVIRYERGGVPLWGAAAR--QCEQPPTCERCGAARVFELQLMPQLLYFVCGAGRVRTACARRDAAIQTKKTTXXXXXXXXTLELDDDDDIDLDWLTVCIFCCERSCGGDAPYVREFAWLQ 265
            C  C  V YCG+  Q +HW+  H                    S   F E  +VT+  P+  + ++                        +H+ + D    Q     T  D+ E EL E   H  T +    ++RF + +A+ PHQV+RY  GG+PLW +A      +  P C  CG+ RVFE Q+MPQLL  +C                                   D     +DW TV +F C  SC  +A Y+ EF W Q
Sbjct:  158 CSRCHSVTYCGKHHQTIHWKHSHKR---------ECESSSVSTSPFLFPEFELVTE--PENLEKNAK-------------------DTETKHKETEDI---QSNVEETLADS-ETELEEMAMH-ETEEIK-VFQRFKKRIASEPHQVVRYTHGGLPLWVSAKHIPSDDDIPPCS-CGSKRVFEFQVMPQLLNNLCV----------------------------------DSTGASIDWGTVAVFTCSLSCSREADYITEFVWKQ 351          
BLAST of Gchil1761.t1 vs. uniprot
Match: UPI001589555D (programmed cell death protein 2 n=1 Tax=Chelonus insularis TaxID=460826 RepID=UPI001589555D)

HSP 1 Score: 80.9 bits (198), Expect = 6.390e-14
Identity = 50/160 (31.25%), Postives = 70/160 (43.75%), Query Frame = 0
Query:  109 GTFQDADEHELPEELFHARTRDTDHTYKRFARVVAAAPHQVIRYERGGVPLWGAAARQCEQPPTCERCGAARVFELQLMPQLLYFVCGAGRVRTACARRDAAIQTKKTTXXXXXXXXTLELDDDDDIDLDWLTVCIFCCERSCGGDAPYVREFAWLQSGV 268
            GT  DADE     +L      + D T+ +F   V   P Q++RY+RGG PLW +A  Q +  P CE C  AR FE Q+MPQLL ++     +++                                  LDW  + IF C+ SC  ++ +  EF W Q  V
Sbjct:  226 GTLADADE----ADLMKMTVANEDETFLKFQETVKKHPDQILRYQRGGKPLWISAENQLKDIPKCENCNQAREFEFQVMPQLLNYLNFNDVLKS----------------------------------LDWGVLTIFTCKNSCDIESGFQEEFIWKQDIV 347          
BLAST of Gchil1761.t1 vs. uniprot
Match: UPI001A988B46 (programmed cell death protein 2 n=2 Tax=Carangaria TaxID=1489904 RepID=UPI001A988B46)

HSP 1 Score: 80.5 bits (197), Expect = 1.110e-13
Identity = 85/265 (32.08%), Postives = 110/265 (41.51%), Query Frame = 0
Query:    3 CPSCRDVVYCGRACQLVHWRSDHHALPADAXXXXXXXXXXXDASTLRFREVRIVTDVHPDVSDDSSSAXXXXXXXXXXXXXXXXXXXXXXQHEHSVDQPQQQPPPHGTFQDADEHELPEELFHARTRDTDHTYKRFARVVAAAPHQVIRYERGGVPLWGAAAR--QCEQPPTCERCGAARVFELQLMPQLLYFVCGAGRVRTACARRDAAIQTKKTTXXXXXXXXTLELDDDDDIDLDWLTVCIFCCERSCGGDAPYVREFAWLQ 265
            C  CR V YCG+  Q +HW+  H                    S   F E  +V  + PD  ++    XXXXXXXXXXXXXX          +  VD P        T  + D     EE+    T DT   ++RF + +A  PHQV+RY RGG PLW ++      +  P C  CGA R+FE Q+MPQLL  +C                                   D     +DW T+ ++ C  SC  D  Y REF W Q
Sbjct:  155 CSRCRTVSYCGKHHQTLHWKHTHKK------ECCSQEASIVTTSPFLFPESELV--IEPDEEEEXXXXXXXXXXXXXXXXXXGGA-------QRGVDCPSLA----DTLAETDL----EEMAMCETEDTK-VFQRFKKKIAPEPHQVVRYSRGGSPLWVSSQHIPSDQDIPPCP-CGAKRMFEFQVMPQLLNSLCV----------------------------------DSTGASIDWGTLAVYTCSASCNHDDQYCREFIWKQ 360          
The following BLAST results are available for this feature:
BLAST of Gchil1761.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2V3IW27_9FLOR1.060e-4231.75Programmed cell death protein 2 n=1 Tax=Gracilario... [more]
R7Q4A2_CHOCR5.660e-2837.76Programmed cell death protein 2 n=1 Tax=Chondrus c... [more]
A0A2C9JHM2_BIOGL1.400e-1628.73MYND-type domain-containing protein n=1 Tax=Biomph... [more]
A0A8J4XZG5_CHIOP8.780e-1631.88Programmed cell death protein 2 n=1 Tax=Chionoecet... [more]
A0A6A4TDP7_SCOMX1.760e-1527.21MYND-type domain-containing protein n=6 Tax=Scopht... [more]
A0A0S7FU83_9TELE2.890e-1528.41PDCD2 n=1 Tax=Poeciliopsis prolifica TaxID=188132 ... [more]
UPI00077AF0BC1.510e-1426.13programmed cell death protein 2-like n=2 Tax=Acrop... [more]
A0A3B3ZB80_9GOBI5.210e-1427.17MYND-type domain-containing protein n=2 Tax=Periop... [more]
UPI001589555D6.390e-1431.25programmed cell death protein 2 n=1 Tax=Chelonus i... [more]
UPI001A988B461.110e-1332.08programmed cell death protein 2 n=2 Tax=Carangaria... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR007320Programmed cell death protein 2, C-terminalPFAMPF04194PDCD2_Ccoord: 132..265
e-value: 6.6E-26
score: 90.6
IPR002893Zinc finger, MYND-typePFAMPF01753zf-MYNDcoord: 2..26
e-value: 2.8E-6
score: 27.3
NoneNo IPR availableGENE3D6.10.140.2220coord: 1..32
e-value: 6.8E-6
score: 27.7
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 111..128
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 59..128
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 59..95
NoneNo IPR availablePANTHERPTHR12298:SF4PROGRAMMED CELL DEATH PROTEIN 2coord: 2..266
NoneNo IPR availablePANTHERPTHR12298PCDC2 PROGRAMMED CELL DEATH PROTEIN 2 -RELATEDcoord: 2..266
NoneNo IPR availableSUPERFAMILY144232HIT/MYND zinc finger-likecoord: 2..26

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00004403_piloncontigtig00004403_pilon:2208815..2209630 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria chilensis NLEC103_M9 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gchil1761.t1Gchil1761.t1Gracilaria chilensis NLEC103_M9 malemRNAtig00004403_pilon 2208815..2209630 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gchil1761.t1 ID=Gchil1761.t1|Name=Gchil1761.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=polypeptide|length=272bp
MRCPSCRDVVYCGRACQLVHWRSDHHALPADADADADADAGAGDASTLRF
REVRIVTDVHPDVSDDSSSADSHSADSHSADSHSTDSHSTDSQHEHSVDQ
PQQQPPPHGTFQDADEHELPEELFHARTRDTDHTYKRFARVVAAAPHQVI
RYERGGVPLWGAAARQCEQPPTCERCGAARVFELQLMPQLLYFVCGAGRV
RTACARRDAAIQTKKTTTKKTTTKKTLELDDDDDIDLDWLTVCIFCCERS
CGGDAPYVREFAWLQSGVPQH*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR007320PDCD2_C
IPR002893Znf_MYND