Gchil1330.t1 (polypeptide) Gracilaria chilensis NLEC103_M9 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGchil1330.t1
Unique NameGchil1330.t1
Typepolypeptide
OrganismGracilaria chilensis NLEC103_M9 male (Gracilaria chilensis NLEC103_M9 male)
Sequence length359
Homology
BLAST of Gchil1330.t1 vs. uniprot
Match: R7QIQ0_CHOCR (Uncharacterized protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QIQ0_CHOCR)

HSP 1 Score: 252 bits (644), Expect = 5.770e-79
Identity = 144/284 (50.70%), Postives = 184/284 (64.79%), Query Frame = 0
Query:   94 VFRRSSSTLAAAFSSERSAVQPPR----IASQAEFRRSFLRLNRHRLLHDVDGHCFRLHPIVMNGDCGFASIAKGINHARHNMPPARHAPTSNP-----PXXXXXXXXXXXXTHSSSPRFS----RSRLRR--SLPRLWRK--SQNTHHSNKRTLYAKDIRSAMFHEIRKAKKTYLADRDTFGAVFTDHDFDRLQRDVGTPGIAGHWLGTVLGVLEHVIIAHAMNVNIFLYQFDLQRQSIRRFESATVHNPDCNVYLFFTGPATSGHFDTLVKISN--DVMFTA 358
            +FRR  + LAA  +   +   P      I SQAEFRR+FL++++ R++ D +G CFRLHPIVMNGDCGF +IAKGIN AR  +      P         P             ++ +  FS    R R RR  S P +W +  ++       ++L AKD+R AMF E++KA+KTYL + +    ++T+ DFD L+R+V  PGIAGHWLGTVLGVLEHVI+A AMN++I+LYQFDLQRQ IR+FESATV NPDC VYLFFTGPA  GHFDTLVKISN  D +F A
Sbjct:    1 MFRRRPTNLAATAAHTAARGYPNNAAAPITSQAEFRRNFLKVHKDRVIRDNNGTCFRLHPIVMNGDCGFGAIAKGINVARERVRDMAPQPXXXXXXXXFPIQQRSQTQNQPQHNNRNKHFSFAHDRKRWRRIRSRPWIWHRLVARRAQDRPTKSLQAKDLRKAMFDELKKARKTYLDECEDLSGIYTNDDFDTLEREVSHPGIAGHWLGTVLGVLEHVIVAQAMNIDIYLYQFDLQRQCIRQFESATVENPDCEVYLFFTGPAACGHFDTLVKISNTRDNLFMA 284          
BLAST of Gchil1330.t1 vs. uniprot
Match: A0A7S1XFW6_9RHOD (Hypothetical protein n=1 Tax=Compsopogon caeruleus TaxID=31354 RepID=A0A7S1XFW6_9RHOD)

HSP 1 Score: 60.1 bits (144), Expect = 1.140e-6
Identity = 56/238 (23.53%), Postives = 89/238 (37.39%), Query Frame = 0
Query:  117 RIASQAEFRRSFLRLNRHRLLHDVDG------HCFRLHPIVMNGDCGFASIAKGINHARHNMPPARHAPTSNPPXXXXXXXXXXXXTHSSSPRFSRSRLRRSLPRLWRKSQNTHHSNKRTLYAKDIRSAMFHEIRKAKKTYLADRDTFGAVFTDHDFDRLQRDVGTPGIAGHWLGTVLGVLEHVIIAHAMNVNIFLYQFDLQRQSIRRFESATVHNPDCNVYLFFTGPATSGHFDTLV 348
            R  +  +FRR  +  +  R +  + G        FR  PI M+G CGFA++AKG+N  +                                 +F+  +LR  L    R +                 S  F E       Y    +  G    D         V   G+AGHWLG    ++E + +A  M + I ++ +D + + +RR +        C + L F+GP + GHFD L+
Sbjct:   79 RFRTAGDFRRHLMMGDARRRILYIPGTAQGQVEVFRFIPIAMDGSCGFAAVAKGVNAVK-------------------------------GMKFTPDKLRLLLRDQARST-----------------SGFFAEEMARNAAYRFCVEEGGCTLDD-----FAASVVRKGVAGHWLGEKWQMVEVMALARVMQIRIDVFTYDEKCRILRRHDELNTSEAQC-IGLLFSGPPSGGHFDLLL 262          
The following BLAST results are available for this feature:
BLAST of Gchil1330.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
R7QIQ0_CHOCR5.770e-7950.70Uncharacterized protein n=1 Tax=Chondrus crispus T... [more]
A0A7S1XFW6_9RHOD1.140e-623.53Hypothetical protein n=1 Tax=Compsopogon caeruleus... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 27..71
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 167..205
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 177..197
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 46..71

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00004433_piloncontigtig00004433_pilon:346539..347615 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria chilensis NLEC103_M9 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gchil1330.t1Gchil1330.t1Gracilaria chilensis NLEC103_M9 malemRNAtig00004433_pilon 346539..347615 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gchil1330.t1 ID=Gchil1330.t1|Name=Gchil1330.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=polypeptide|length=359bp
MRQPAADAALSHPLEFASAPALVLHSRSSTRVTSNHHARPRPAHLPPRTA
AAPAAPAAPNAPAAPAAPAAPAAPAAPAAPAAPATPKKPRAWTVFRRSSS
TLAAAFSSERSAVQPPRIASQAEFRRSFLRLNRHRLLHDVDGHCFRLHPI
VMNGDCGFASIAKGINHARHNMPPARHAPTSNPPSPSAQPPTPPQQTHSS
SPRFSRSRLRRSLPRLWRKSQNTHHSNKRTLYAKDIRSAMFHEIRKAKKT
YLADRDTFGAVFTDHDFDRLQRDVGTPGIAGHWLGTVLGVLEHVIIAHAM
NVNIFLYQFDLQRQSIRRFESATVHNPDCNVYLFFTGPATSGHFDTLVKI
SNDVMFTA*
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