Gchil10254.t1 (polypeptide) Gracilaria chilensis NLEC103_M9 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGchil10254.t1
Unique NameGchil10254.t1
Typepolypeptide
OrganismGracilaria chilensis NLEC103_M9 male (Gracilaria chilensis NLEC103_M9 male)
Sequence length132
Homology
BLAST of Gchil10254.t1 vs. uniprot
Match: A0A2V3IIA1_9FLOR (Dihydroorotate dehydrogenase (quinone), mitochondrial n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IIA1_9FLOR)

HSP 1 Score: 129 bits (324), Expect = 2.280e-33
Identity = 77/138 (55.80%), Postives = 92/138 (66.67%), Query Frame = 0
Query:    1 MSLRFFASMAAASIAALYAYAASTFVYHGSLRRYLYSFNPERAHRIAVMLSKPHLAAPRLPFVPHQRDSSPRLLSHVCALPFYNPVVLASGFEKHAEAM-------FGFFHVGSVTPVAQERNERSEVFRLTEHRAVL 131
            MSLRFFA  AAAS AALY YAA+  +Y G + RY+ S +PERAHR+A+  +K HLA PRLPF+P   D  PRL + V  L F NPV LA+GF+KHAEAM       FGF  VGSVTP AQ  N    +FRL +  AV+
Sbjct:    1 MSLRFFARAAAASAAALYTYAATADLYQGPVARYMASIDPERAHRLALWFTKHHLAVPRLPFLPRPPDP-PRLRTAVWGLSFSNPVGLAAGFDKHAEAMAGLFALGFGFVEVGSVTPRAQPGNPPPRLFRLPQDAAVI 137          
BLAST of Gchil10254.t1 vs. uniprot
Match: A0A7L9WVD3_9RHOB (Dihydroorotate dehydrogenase (quinone) n=1 Tax=Pseudopuniceibacterium antarcticum TaxID=2613965 RepID=A0A7L9WVD3_9RHOB)

HSP 1 Score: 74.3 bits (181), Expect = 4.410e-13
Identity = 47/107 (43.93%), Postives = 63/107 (58.88%), Query Frame = 0
Query:   33 RYLYSFNPERAHRIAVMLSKPHLAAPRLPFVPHQRD-SSPRLLSHVCALPFYNPVVLASGFEKHAEAM-------FGFFHVGSVTPVAQERNERSEVFRLTEHRAVL 131
            R L+ F+PERAH ++       LAA R   VP  R  +SPRL + V  L   NP+ LA+G++K+AEA+       FGF  VG+ TP AQ  N +  +FRL E RAV+
Sbjct:   10 RLLHRFDPERAHTLS-------LAALRAGLVPLPRQITSPRLRTRVAGLTLPNPIGLAAGYDKNAEALSPLSRAGFGFLEVGAATPRAQPGNPKPRLFRLNEDRAVI 109          
BLAST of Gchil10254.t1 vs. uniprot
Match: UPI00193EC1D6 (dihydroorotate dehydrogenase (quinone), mitochondrial n=2 Tax=Nilaparvata lugens TaxID=108931 RepID=UPI00193EC1D6)

HSP 1 Score: 73.9 bits (180), Expect = 7.180e-13
Identity = 44/113 (38.94%), Postives = 66/113 (58.41%), Query Frame = 0
Query:   27 YHGSLRRYLYSFNPERAHRIAVMLSKPHLAAPRLPFVPHQRDSSP-RLLSHVCALPFYNPVVLASGFEKHAEAM-------FGFFHVGSVTPVAQERNERSEVFRLTEHRAVL 131
            Y   L   ++  +PE +H++AV +SK  L       +P  +   P  LLS V  L F NPV +A+GF+KHAEA+       FGF  +GSVTP++Q  N +  VFRL+++ A++
Sbjct:   41 YENVLLPLVHKLDPELSHKLAVFVSKYQL-------LPQSKYKDPAELLSRVWHLSFSNPVGVAAGFDKHAEAVVGLAQVGFGFVEIGSVTPLSQPGNPKPRVFRLSDNHAII 146          
BLAST of Gchil10254.t1 vs. uniprot
Match: A0A3M8QR30_9PROT (Dihydroorotate dehydrogenase (quinone) n=1 Tax=Acidithiobacillus sulfuriphilus TaxID=1867749 RepID=A0A3M8QR30_9PROT)

HSP 1 Score: 72.8 bits (177), Expect = 1.660e-12
Identity = 44/113 (38.94%), Postives = 60/113 (53.10%), Query Frame = 0
Query:   28 HGSLRRYLYSFNPERAHR--IAVMLSKPHLAAPRLPFVPHQRDSSPRLLSHVCALPFYNPVVLASGFEKHAEAM-------FGFFHVGSVTPVAQERNERSEVFRLTEHRAVL 131
            +G LRR L+  +PE AH   IA + +  H+ A R           PRL   +  L F NP+ LA+GF+K+AEA+       FGF  +G+VTP  Q  N R  +FR  E  AV+
Sbjct:    3 YGMLRRGLFLLDPETAHHWTIAGLGALGHMPATRAHLAARYTQEDPRLAQEIWGLHFANPLGLAAGFDKNAEALTALPALGFGFVEIGTVTPRPQPGNPRPRIFRFPEREAVI 115          
BLAST of Gchil10254.t1 vs. uniprot
Match: A0A372EY79_9RHOB (Dihydroorotate dehydrogenase (quinone) n=1 Tax=Rhodobacteraceae bacterium 63075 TaxID=2301226 RepID=A0A372EY79_9RHOB)

HSP 1 Score: 72.4 bits (176), Expect = 2.180e-12
Identity = 47/105 (44.76%), Postives = 62/105 (59.05%), Query Frame = 0
Query:   35 LYSFNPERAHRIAVMLSKPHLAAPRLPFVPHQRD-SSPRLLSHVCALPFYNPVVLASGFEKHAEAM-------FGFFHVGSVTPVAQERNERSEVFRLTEHRAVL 131
            L+  +PERAH +A       + A RL  VP     +SPRL + +  L   NPV LA+GF+K+AEA+       FGF  VG+VTP AQ  N R  +FRL+E RAV+
Sbjct:   12 LHRSDPERAHTMA-------MRALRLGLVPSPGPFTSPRLATQIAGLELPNPVGLAAGFDKNAEALGPLSRAGFGFIEVGAVTPRAQPGNPRPRLFRLSEDRAVI 109          
BLAST of Gchil10254.t1 vs. uniprot
Match: A0A6B2LBE1_9EUKA (Dihydroorotate oxidase n=1 Tax=Arcella intermedia TaxID=1963864 RepID=A0A6B2LBE1_9EUKA)

HSP 1 Score: 72.0 bits (175), Expect = 2.220e-12
Identity = 46/100 (46.00%), Postives = 54/100 (54.00%), Query Frame = 0
Query:   39 NPERAHRIAVMLSKPHLAAPRLPFVPHQRDSSPRLLSHVCALPFYNPVVLASGFEKHAEAM-------FGFFHVGSVTPVAQERNERSEVFRLTEHRAVL 131
            +PER HR+AV        A R  FVP      P L S +    F NPV LA+GF+K AEA+       FGF  +GSV P AQ  N R  VFRL E RAV+
Sbjct:   36 DPERCHRLAVQ-------AARFGFVPRSPPDDPILRSTLWGRLFVNPVGLAAGFDKDAEAISGMKKVGFGFIEIGSVCPEAQGGNPRPRVFRLLEDRAVI 128          
BLAST of Gchil10254.t1 vs. uniprot
Match: A0A8J5AD52_9DIPT (Uncharacterized protein n=2 Tax=Bradysia TaxID=35571 RepID=A0A8J5AD52_9DIPT)

HSP 1 Score: 72.4 bits (176), Expect = 2.530e-12
Identity = 44/117 (37.61%), Postives = 66/117 (56.41%), Query Frame = 0
Query:   27 YHGSLRRYLYSFNPERAHRIAVMLSKPHLAAPRLPFVPHQRDSSPRLLSHVCALPFY-----NPVVLASGFEKHAEAM-------FGFFHVGSVTPVAQERNERSEVFRLTEHRAVL 131
            Y   L  +++ F+PE  HR+AV   K  L        P ++ S P  LS    + F+     NP+ +A+GF+KHAEA+       FGF  +GSVTP+AQ+ N +  VFRL+E +A++
Sbjct:   34 YDNFLMPFIHLFDPESCHRLAVFACKYRL-------FPREKQSDPHSLS----IKFFSHTLSNPLGVAAGFDKHAEAIVGLNDIGFGFVEIGSVTPLAQDGNPKPRVFRLSEDKAII 139          
BLAST of Gchil10254.t1 vs. uniprot
Match: A0A176WFY0_MARPO (Dihydroorotate dehydrogenase (quinone), mitochondrial n=2 Tax=Marchantia polymorpha TaxID=3197 RepID=A0A176WFY0_MARPO)

HSP 1 Score: 72.4 bits (176), Expect = 2.840e-12
Identity = 44/102 (43.14%), Postives = 59/102 (57.84%), Query Frame = 0
Query:   38 FNPERAHRIAVMLSKPHLAAPRLPFVPHQRDSSPRLLS-HVCALPFYNPVVLASGFEKHAEAM-------FGFFHVGSVTPVAQERNERSEVFRLTEHRAVL 131
            F+PE AHR+A+  +   L       VP +    P +L+  V    F NP+ LA+GF+K+AEA+       FGF  VGSVTPV QE N +  VFRL EH A++
Sbjct:  103 FDPEDAHRLAIWAASQGL-------VPKENRPDPAILATEVWGRKFSNPIGLAAGFDKNAEAVEGLLGIGFGFVEVGSVTPVPQEGNPKPRVFRLHEHGAII 197          
BLAST of Gchil10254.t1 vs. uniprot
Match: A0A6B2L6X6_9EUKA (Dihydroorotate dehydrogenase (quinone), mitochondrial n=1 Tax=Arcella intermedia TaxID=1963864 RepID=A0A6B2L6X6_9EUKA)

HSP 1 Score: 72.0 bits (175), Expect = 3.340e-12
Identity = 46/100 (46.00%), Postives = 54/100 (54.00%), Query Frame = 0
Query:   39 NPERAHRIAVMLSKPHLAAPRLPFVPHQRDSSPRLLSHVCALPFYNPVVLASGFEKHAEAM-------FGFFHVGSVTPVAQERNERSEVFRLTEHRAVL 131
            +PER HR+AV        A R  FVP      P L S +    F NPV LA+GF+K AEA+       FGF  +GSV P AQ  N R  VFRL E RAV+
Sbjct:   36 DPERCHRLAVQ-------AARFGFVPRSPPDDPILRSTLWGRLFVNPVGLAAGFDKDAEAISGMKKVGFGFIEIGSVCPEAQGGNPRPRVFRLLEDRAVI 128          
BLAST of Gchil10254.t1 vs. uniprot
Match: A3SI38_ROSNI (Dihydroorotate dehydrogenase (quinone) n=5 Tax=Roseovarius TaxID=74030 RepID=A3SI38_ROSNI)

HSP 1 Score: 71.6 bits (174), Expect = 4.110e-12
Identity = 45/104 (43.27%), Postives = 60/104 (57.69%), Query Frame = 0
Query:   35 LYSFNPERAHRIAVMLSKPHLAAPRLPFVPHQRDSSPRLLSHVCALPFYNPVVLASGFEKHAEAM-------FGFFHVGSVTPVAQERNERSEVFRLTEHRAVL 131
            L+ F+PERAH +A+      L     P       +SPRL + +  L   NPV LA+GF+K+AEA+       FGF  VG+VTP AQ  N +  +FRLTE RAV+
Sbjct:   12 LHKFDPERAHGLAIKALTSGLVPLSGPV------TSPRLRTELAGLDLPNPVGLAAGFDKNAEALGPLSRAGFGFIEVGAVTPRAQPGNPQPRLFRLTEDRAVI 109          
The following BLAST results are available for this feature:
BLAST of Gchil10254.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2V3IIA1_9FLOR2.280e-3355.80Dihydroorotate dehydrogenase (quinone), mitochondr... [more]
A0A7L9WVD3_9RHOB4.410e-1343.93Dihydroorotate dehydrogenase (quinone) n=1 Tax=Pse... [more]
UPI00193EC1D67.180e-1338.94dihydroorotate dehydrogenase (quinone), mitochondr... [more]
A0A3M8QR30_9PROT1.660e-1238.94Dihydroorotate dehydrogenase (quinone) n=1 Tax=Aci... [more]
A0A372EY79_9RHOB2.180e-1244.76Dihydroorotate dehydrogenase (quinone) n=1 Tax=Rho... [more]
A0A6B2LBE1_9EUKA2.220e-1246.00Dihydroorotate oxidase n=1 Tax=Arcella intermedia ... [more]
A0A8J5AD52_9DIPT2.530e-1237.61Uncharacterized protein n=2 Tax=Bradysia TaxID=355... [more]
A0A176WFY0_MARPO2.840e-1243.14Dihydroorotate dehydrogenase (quinone), mitochondr... [more]
A0A6B2L6X6_9EUKA3.340e-1246.00Dihydroorotate dehydrogenase (quinone), mitochondr... [more]
A3SI38_ROSNI4.110e-1243.27Dihydroorotate dehydrogenase (quinone) n=5 Tax=Ros... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR005720Dihydroorotate dehydrogenase domainPFAMPF01180DHO_dhcoord: 74..131
e-value: 2.9E-7
score: 30.0
IPR013785Aldolase-type TIM barrelGENE3D3.20.20.70Aldolase class Icoord: 26..131
e-value: 1.8E-19
score: 71.7
NoneNo IPR availablePANTHERPTHR48109DIHYDROOROTATE DEHYDROGENASE (QUINONE), MITOCHONDRIAL-RELATEDcoord: 19..131
NoneNo IPR availablePANTHERPTHR48109:SF4DIHYDROOROTATE DEHYDROGENASE (QUINONE), MITOCHONDRIALcoord: 19..131
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..5
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..21
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 22..131
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 6..17
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 18..21
NoneNo IPR availableSUPERFAMILY51395FMN-linked oxidoreductasescoord: 27..130
NoneNo IPR availableTMHMMTMhelixcoord: 5..27

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000065_piloncontigtig00000065_pilon:129837..130232 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria chilensis NLEC103_M9 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gchil10254.t1Gchil10254.t1Gracilaria chilensis NLEC103_M9 malemRNAtig00000065_pilon 129837..130232 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gchil10254.t1 ID=Gchil10254.t1|Name=Gchil10254.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=polypeptide|length=132bp
MSLRFFASMAAASIAALYAYAASTFVYHGSLRRYLYSFNPERAHRIAVML
SKPHLAAPRLPFVPHQRDSSPRLLSHVCALPFYNPVVLASGFEKHAEAMF
GFFHVGSVTPVAQERNERSEVFRLTEHRAVL*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR005720Dihydroorotate_DH
IPR013785Aldolase_TIM