Gchil10027.t1 (polypeptide) Gracilaria chilensis NLEC103_M9 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGchil10027.t1
Unique NameGchil10027.t1
Typepolypeptide
OrganismGracilaria chilensis NLEC103_M9 male (Gracilaria chilensis NLEC103_M9 male)
Sequence length364
Homology
BLAST of Gchil10027.t1 vs. uniprot
Match: A0A2V3IE35_9FLOR (Protein HGH1 homolog n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IE35_9FLOR)

HSP 1 Score: 429 bits (1103), Expect = 2.270e-147
Identity = 223/341 (65.40%), Postives = 273/341 (80.06%), Query Frame = 0
Query:    1 MDKESLSEISQLLSGAVGPSTRTAACTALAACSAGGAGAKLRHIIGTTQVGEEAVRRILVLCGDRHCSRIALSALVNMSEDAEAVRTMTNLGAVQQASEALLDPELQELSSLYAGLLSNLTRFPCGVDALVGKGLTGVEKDLTIDTLLKLVTRIETIPNVLWMPNALTTPEGREALLFKYATSSPNNFSRSGQQPLTWLLRLLPSSNEATRLAVASALRNCAMVEDCHEALLSEPETIGTCLTRLMSAQHPVSPQNVRKAPQSVQNIAFNPMSATPEPLVEIRLILVEALLLLCKSSQGRKVLWEKDAYAVLEVWKQAEHNEQVQTAVDSIIERVTIAEDN 341
            MD+ +LSE+ QLLSG+VGPSTR A CTA+AAC++G AGAKLR I+GT+ VGE  +RR+LVLCGD  C+R+ALSALVN+SEDAEA   +T  GAVQ+A +ALLD E Q +++LYAGLLSNLTR   GVDALVGKGLTGVEKDL ++TLLKLVTR+E +PNVLWM NALT+ EGREALL    +++ +    + QQPLTWLLRLL S  +  RL  ASA+RNCAM EDCHE L+S  + IG CLTRLMS++H V+  +VRKAPQ V++IA NP  A  EPLVEIRL+LVEALLLLCK+ +GR+ LW+ DAYAVLE WKQ E NEQ+   V+SI++RVT+AEDN
Sbjct:    1 MDETTLSEVVQLLSGSVGPSTRAATCTAIAACTSGDAGAKLRRIMGTSSVGETTIRRLLVLCGDPQCARVALSALVNISEDAEASAVVTRAGAVQRACKALLDMEQQNMAALYAGLLSNLTRHISGVDALVGKGLTGVEKDLAVNTLLKLVTRVEHMPNVLWMSNALTSAEGREALLLLNNSATNSKSQDTDQQPLTWLLRLLRSPTDTKRLGAASAIRNCAMAEDCHETLVSNTDAIGICLTRLMSSEHKVAASDVRKAPQVVRDIANNPNKADAEPLVEIRLLLVEALLLLCKTPEGRRALWDTDAYAVLEKWKQHEQNEQIVRTVNSIVDRVTLAEDN 341          
BLAST of Gchil10027.t1 vs. uniprot
Match: A0A7S0ZFW1_9RHOD (Protein HGH1 homolog n=1 Tax=Timspurckia oligopyrenoides TaxID=708627 RepID=A0A7S0ZFW1_9RHOD)

HSP 1 Score: 109 bits (273), Expect = 4.770e-23
Identity = 94/324 (29.01%), Postives = 156/324 (48.15%), Query Frame = 0
Query:   64 DRHCSRIALSALVNMSEDAEAVRTMTNLGAVQQASEALL--DPELQELSSLYAGLLSNLTRFPCGVDALVGKGLTGVEKDLTIDTLLKLVTR------------IETIPNV-LWMPNALTTPEGREALLFKYATSSPNNFSRSGQQPLTWLLRLLPSSNEATRLAVASALRNCAMVEDCHEALLS---EPETIGTCLTRLM----SAQHPVSPQ---NVRKAPQSVQNIAFNPMSATPEPLVEIRLILVEALLLLCKSSQGRKVLWEKDAYAVLEVWKQAEHNEQVQTAVDSIIERVTIAEDNEGNIEENLESVNMAEAPKMAS 362
            D   +R +LSALVN + D +++     +  + +  E LL  DP + +L SL   L++NLTRFP GV +  G   +   K+L    +++L  R            I+ + +V +++ N   T  GR  +L         +   +G    +  L L  S N   RL VA  LRN A+ + CH+ALL      +++   L RL+        P+  +   N ++A  S   +A     +  E + E+R++L E LL +CK+ QGR  L E+ AY VL      E N + Q  ++ +++R  +A+       E+ +S + A APK++S
Sbjct:   64 DLMTARASLSALVNFAADPDSIHAFAEIQVISRMLETLLEKDPSVHQLDSLRVSLITNLTRFPKGVQSTFGSNESRFAKELAEQRIVRLFERMMNEQERGHDGSIDALESVAMFIANLCITEVGRNLVL---------DGGEAGVLGRSCTL-LKSSKNVNRRLGVALMLRNVAVDDSCHDALLGMKMNADSVTQVLCRLVYYSDELPRPIEDEELTNAQEALVSAVKVARTGALSRYESVAEVRIVLAEFLLAMCKTKQGRDGLRERCAYPVLRCAHWIEKNPEAQETLNQVVDRTELAD-------EDNDSADTATAPKISS 370          
BLAST of Gchil10027.t1 vs. uniprot
Match: R7QEF3_CHOCR (Uncharacterized protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QEF3_CHOCR)

HSP 1 Score: 64.7 bits (156), Expect = 8.680e-9
Identity = 39/87 (44.83%), Postives = 53/87 (60.92%), Query Frame = 0
Query:  146 TLLKLVTRIETIPNVLWMPNALTTPEGREALLFKYATSSPNNFSRSGQQPLTWLLRLLPSSNEATRLAVASALRNCAMVEDCHEALL 232
            TLL LV R+ +IPNVL + NA  + EGR+ LL +   +         +Q LT LLRLL +     RLA AS +RNCAM ++CH+ L+
Sbjct:   15 TLLVLVERVPSIPNVLRLSNACASQEGRDVLLVEGRQAK--------RQLLTRLLRLLEAGEAEKRLAGASWVRNCAMADECHDVLV 93          
BLAST of Gchil10027.t1 vs. uniprot
Match: K1QN54_CRAGI (Protein HGH1 homolog n=2 Tax=Crassostrea gigas TaxID=29159 RepID=K1QN54_CRAGI)

HSP 1 Score: 63.9 bits (154), Expect = 1.420e-7
Identity = 47/162 (29.01%), Postives = 85/162 (52.47%), Query Frame = 0
Query:  198 WLL-RLLP----SSNEATRLAVASALRNCAMVEDCHEALLSEPETIGTCLTRLMSAQHPVSPQNVRKAPQSVQNIAFNPMSATPEPLVEIRLILVEALLLLCKSSQGRKVLWEKDAYAVLEVWKQAEHNEQVQTAVDSIIERVTIAEDNEGNIEENLESVNM 354
            W++ RLLP      ++  RL V S ++NC   E+ H+ LLS+   I + L   ++        ++ K P  +Q   + P   T EP+ EIR IL++A+L LC +  GR+ + +K+ Y ++    ++E       A+ ++I+ + I ++ E  +E NL  V +
Sbjct:  243 WVIQRLLPFVSYMESDIRRLGVVSCIKNCCFDEEHHDWLLSDKVDILSYLLLPLAGPEEFDDDDMEKLPDRLQ---YLPPDKTREPIAEIRRILLQAILKLCATRDGRQYIKDKNTYVIIRELHKSEGQRSNIPAIMNLID-ILIGDEPEPGME-NLHQVEI 399          
BLAST of Gchil10027.t1 vs. uniprot
Match: A0A7D9J8D8_PARCT (Protein HGH1 homolog n=1 Tax=Paramuricea clavata TaxID=317549 RepID=A0A7D9J8D8_PARCT)

HSP 1 Score: 62.4 bits (150), Expect = 3.650e-7
Identity = 41/149 (27.52%), Postives = 75/149 (50.34%), Query Frame = 0
Query:  211 RLAVASALRNCAMVEDCHEALLSEPETIGTCLTRLMSAQHPVSPQNVRKAPQSVQNIAFNPMSATPEPLVEIRLILVEALLLLCKSSQGRKVLWEKDAYAVLEVWKQAEHNEQVQTAVDSIIERVTIAEDNEGNIEENLESVNMAEAPK 359
            R  +   +RNC    DCH+ LL +   I   L   ++     S     K P  +Q +  +    T     EIR++L+E L++LC +  GR+ + EK+AY ++    + E +E V  A++++++ + I ++ E N+  NL  V + +  K
Sbjct:  203 RKGIVGIIRNCCFEYDCHDWLLGDNVDILPTLLLSLAGPEEFSESENDKLPMDLQYLGDDKERETDH---EIRMMLIECLMMLCSTKSGRQYIQEKNAYVIIRELHKWEKDENVCKAIENLVQ-ILIGDEPEDNMA-NLHEVEIPDEIK 346          
BLAST of Gchil10027.t1 vs. uniprot
Match: A0A8B8EQY0_CRAVI (Protein HGH1 homolog n=2 Tax=Crassostrea virginica TaxID=6565 RepID=A0A8B8EQY0_CRAVI)

HSP 1 Score: 61.6 bits (148), Expect = 6.950e-7
Identity = 46/162 (28.40%), Postives = 84/162 (51.85%), Query Frame = 0
Query:  198 WLL-RLLP----SSNEATRLAVASALRNCAMVEDCHEALLSEPETIGTCLTRLMSAQHPVSPQNVRKAPQSVQNIAFNPMSATPEPLVEIRLILVEALLLLCKSSQGRKVLWEKDAYAVLEVWKQAEHNEQVQTAVDSIIERVTIAEDNEGNIEENLESVNM 354
            W++ RLLP      ++  RL V S ++NC   ++ H+ LLS+   I + L   ++        ++ K P  +Q   + P   T EP+ EIR IL++A+L LC + +GR  + +K+ Y ++    + E       A+ ++I+ + I ++ E  +E NL  V +
Sbjct:  191 WVIQRLLPFVSYMESDIRRLGVVSCVKNCCFDDEHHDWLLSDKVDILSFLLLPLAGPEEFDDDDMEKLPDRIQ---YLPPDKTREPVTEIRRILLQAILKLCATKEGRLFIRDKNTYVIIRELHKWESQRSNIPAIMNLID-ILIGDEPEPGME-NLHQVEI 347          
BLAST of Gchil10027.t1 vs. uniprot
Match: H2ZQF9_CIOSA (Protein HGH1 homolog n=1 Tax=Ciona savignyi TaxID=51511 RepID=H2ZQF9_CIOSA)

HSP 1 Score: 60.1 bits (144), Expect = 2.010e-6
Identity = 80/322 (24.84%), Postives = 133/322 (41.30%), Query Frame = 0
Query:   44 IIGTTQVGEEAVRRILVLCGDRHCSRI--ALSALVNMSEDAEAVRTMTNLGAVQQASEALLDPELQELSSLYAGLLSNLTRFPCGVDALVGKGLTGVEKD----LTIDTLLKLVTRIETIPN------VLWMPNALTTPEGREALLFKYATSSPNNFSRSGQQPLTWLLRLLPSSNEATRLA-VASALRNCAMVEDCHEALLSEPETIGTCLTRLMSAQHPVSPQNVRKAPQSVQNIAFNPMSATPEPLVEIRLILVEALLLLCKSSQGRKVLWEKDAYAVLEV---WKQAEHNEQVQTAVDSIIERVTIAEDNEGNIEENL 349
            I   TQ+ E     IL L  D H + +  A   LVN+S D  AV  +     +      ++       S    G+L+NLTR   G   +  K L  +  D    + +  LL++  +++               N    PE R+ LL K ++SS           +  LL  L       R   VA+ +RNC  V + H+ +L E   +   L   ++        +  K P  +Q   + P     E   +IR+IL+EA+ LLC +  GR  + +K+ Y ++     W+   +N+ V    + +++ +   E +EG   ENL
Sbjct:   43 IFDNTQLLES----ILALTKDTHHTVVNEAYLTLVNLSTDGRAVAALLKKYDILPEFLKIICDSESPYSDKACGILNNLTRELEGAKLVAAK-LNDIYPDAPKTVKLSKLLEIFCKVDYNKKCSLDYLAALFSNLSQLPEVRQYLL-KQSSSS-----------IKALLPFLTYKRSLKRRGGVAATIRNCCFVYESHDWILGEEIDLLPHLLLPLAGSEEFDDDDNDKLPLDLQ---YLPPDKEREEDPDIRIILIEAITLLCATKSGRAYVKDKNTYVIMRELYRWESDNNNDDVADVCERLVQILISDEPDEGR--ENL 342          
BLAST of Gchil10027.t1 vs. uniprot
Match: UPI00145533FC (protein HGH1 homolog n=1 Tax=Asterias rubens TaxID=7604 RepID=UPI00145533FC)

HSP 1 Score: 60.1 bits (144), Expect = 2.070e-6
Identity = 65/256 (25.39%), Postives = 116/256 (45.31%), Query Frame = 0
Query:  116 LLSNLTRFPCGVDALVGKGLTGVEKDLTIDTLLKLVTRIETI---------PNVLWMPNALTT----PEGREALLFKYATSSPNNFSRSGQQPLTWLLRLLP----SSNEATRLAVASALRNCAMVEDCHEALLSEPETIGTCLTRLMSAQHPVSPQNVRKAPQSVQNIAFNPMSATPEPLVEIRLILVEALLLLCKSSQGRKVLWEKDAYAVLEVWKQAEHNEQVQTAVDSIIERVTIAEDNEGNIEENLESVNM 354
            +L+N+TR P G   ++       E+D  +    KLVT +ET           N+ ++   L+     PEGRE +L K                   + RLLP      +   R  + +ALRNC    D H+ LLSE   I   L   ++    ++ + +   P+ +Q +  +    T +   +I+ +L+EA++ LC +  GRKV+ +K  Y ++  + Q E    +    + +I+ + I ++ E  +E NL+ V +
Sbjct:  117 VLTNITRVPAGCRHVME---VLQEQDFPV----KLVTLVETFGTKDYNSKNSNLDYLGTVLSNLTQLPEGREFVLDKDRCV---------------IQRLLPYIHYQGSGVRRRGIVAALRNCCFETDYHDWLLSEAVDILPHLLLPLAGPEELTEEEMEGMPEDLQYLDEDKKRETNK---DIKKMLIEAVMKLCATKSGRKVVQDKRTYIIMREYHQWEKEPSLMQPCEDLIQ-ILIGDEPEPGME-NLQEVTI 345          
The following BLAST results are available for this feature:
BLAST of Gchil10027.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 8
Match NameE-valueIdentityDescription
A0A2V3IE35_9FLOR2.270e-14765.40Protein HGH1 homolog n=1 Tax=Gracilariopsis chorda... [more]
A0A7S0ZFW1_9RHOD4.770e-2329.01Protein HGH1 homolog n=1 Tax=Timspurckia oligopyre... [more]
R7QEF3_CHOCR8.680e-944.83Uncharacterized protein n=1 Tax=Chondrus crispus T... [more]
K1QN54_CRAGI1.420e-729.01Protein HGH1 homolog n=2 Tax=Crassostrea gigas Tax... [more]
A0A7D9J8D8_PARCT3.650e-727.52Protein HGH1 homolog n=1 Tax=Paramuricea clavata T... [more]
A0A8B8EQY0_CRAVI6.950e-728.40Protein HGH1 homolog n=2 Tax=Crassostrea virginica... [more]
H2ZQF9_CIOSA2.010e-624.84Protein HGH1 homolog n=1 Tax=Ciona savignyi TaxID=... [more]
UPI00145533FC2.070e-625.39protein HGH1 homolog n=1 Tax=Asterias rubens TaxID... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR011989Armadillo-like helicalGENE3D1.25.10.10coord: 192..347
e-value: 4.4E-6
score: 28.3
coord: 1..152
e-value: 3.3E-5
score: 25.5
IPR007206Protein HGH1 C-terminalPFAMPF04064DUF384coord: 289..334
e-value: 4.9E-8
score: 32.7
IPR039717Protein Hgh1PANTHERPTHR13387PROTEIN HGH1 HOMOLOGcoord: 53..352
IPR016024Armadillo-type foldSUPERFAMILY48371ARM repeatcoord: 10..341

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00004442_piloncontigtig00004442_pilon:460660..461751 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria chilensis NLEC103_M9 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gchil10027.t1Gchil10027.t1Gracilaria chilensis NLEC103_M9 malemRNAtig00004442_pilon 460660..461751 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gchil10027.t1 ID=Gchil10027.t1|Name=Gchil10027.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=polypeptide|length=364bp
MDKESLSEISQLLSGAVGPSTRTAACTALAACSAGGAGAKLRHIIGTTQV
GEEAVRRILVLCGDRHCSRIALSALVNMSEDAEAVRTMTNLGAVQQASEA
LLDPELQELSSLYAGLLSNLTRFPCGVDALVGKGLTGVEKDLTIDTLLKL
VTRIETIPNVLWMPNALTTPEGREALLFKYATSSPNNFSRSGQQPLTWLL
RLLPSSNEATRLAVASALRNCAMVEDCHEALLSEPETIGTCLTRLMSAQH
PVSPQNVRKAPQSVQNIAFNPMSATPEPLVEIRLILVEALLLLCKSSQGR
KVLWEKDAYAVLEVWKQAEHNEQVQTAVDSIIERVTIAEDNEGNIEENLE
SVNMAEAPKMASF*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR011989ARM-like
IPR007206Protein_HGH1_C
IPR039717Hgh1
IPR016024ARM-type_fold