Gchil9043.t1 (mRNA) Gracilaria chilensis NLEC103_M9 male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NameGchil9043.t1
Unique NameGchil9043.t1
TypemRNA
OrganismGracilaria chilensis NLEC103_M9 male (Gracilaria chilensis NLEC103_M9 male)
Sequence length665
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00004370_piloncontigtig00004370_pilon:1107507..1109501 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gracilaria chilensis NLEC103_M9 male OGS1.02022-05-09
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesTypePosition
Gchil9043Gchil9043Gracilaria chilensis NLEC103_M9 malegenetig00004370_pilon 1107507..1109501 -


The following stop_codon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Gchil9043.t1.stop1Gchil9043.t1.stop1Gracilaria chilensis NLEC103_M9 malestop_codontig00004370_pilon 1107507..1107509 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Gchil9043.t1.CDS1Gchil9043.t1.CDS1Gracilaria chilensis NLEC103_M9 maleCDStig00004370_pilon 1107507..1109501 -


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Gchil9043.t1.exon1Gchil9043.t1.exon1Gracilaria chilensis NLEC103_M9 maleexontig00004370_pilon 1107507..1109501 -


The following start_codon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Gchil9043.t1.start1Gchil9043.t1.start1Gracilaria chilensis NLEC103_M9 malestart_codontig00004370_pilon 1109499..1109501 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
Gchil9043.t1Gchil9043.t1Gracilaria chilensis NLEC103_M9 malepolypeptidetig00004370_pilon 1107507..1109501 -


Sequences
The following sequences are available for this feature:

mRNA sequence

>Gchil9043.t1 ID=Gchil9043.t1|Name=Gchil9043.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=mRNA|length=665bp
MNEKIVIITLFAALLIAPSNSMPRKARASGEIDSFEIPHSNARRDKGLPA
FDNPRASSGEAKLNEERSAHHHSPDHTAVIKMWQPKSNPNKRNSEANTVT
TREKNGTSTVIIPEASSDVPANKTTDTNFGKSQEFLLGNDAPQEEEEVER
NIEGGHHFMATHNREQSLDIEEQKLMAATNKLVKWLRNRLRKRLSDVADL
ESEITTENELLKNLSEEIQDASRDREDEIKQKLRTKKELSDFRRHSNPPD
AGVNRVRSQTKALSEQLERLKDAYESMTMRHKDLENKLRSAGFSHWLEAR
GRDYFPDTAIGVLSKSAQVLGPVSHGFQRALLFDDRLSTEMEQIVPGSDE
TIFGKIVWDITMMVPFIPFLLLLRLASGMLRSLSVYDIVLCGSGLFAAES
VLCFVMSAFFGREVLGICQEVNESILVALLFVNSSAFFILFLAQILISCL
RPSRAEAVQAILLFTVGCRYYQYVFRPVMLSKPVMVTILSHILYIITFSL
ILVEKKRVMNFKTPYDQYFQKLMMAIEAWVFDTGHAMRNVFSDIVPYGSR
TYTEIGFGSRSSFYASVSNCDINSEAHERMSTDEIEALECKPPPHGPQNT
EYLGQNRWYPVNRSASLIRKTFTASLEYGDRINLAPPGLNTMGRAQKKFR
SNSDDSLVYQSCME*
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spliced messenger RNA

>Gchil9043.t1 ID=Gchil9043.t1|Name=Gchil9043.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=mRNA|length=1995bp|location=Sequence derived from alignment at tig00004370_pilon:1107507..1109501- (Gracilaria chilensis NLEC103_M9 male)|Notes=Excludes all bases but those of type(s): exon.  
ATGAACGAAAAAATAGTAATCATCACTCTGTTTGCAGCTCTGCTCATCGC
TCCTAGCAATTCGATGCCACGAAAAGCTCGAGCATCAGGTGAAATAGACT
CATTCGAAATACCACACTCCAATGCGCGTCGCGACAAAGGACTCCCTGCC
TTCGACAATCCCCGAGCTAGTAGCGGTGAAGCAAAACTGAACGAAGAAAG
GTCAGCACACCACCACTCTCCGGACCATACCGCCGTCATTAAGATGTGGC
AACCGAAAAGTAATCCGAACAAGAGGAACTCCGAGGCGAACACGGTGACC
ACTCGGGAAAAGAATGGAACCTCGACCGTGATTATCCCTGAAGCTTCGAG
CGATGTACCTGCAAACAAAACCACCGACACAAACTTTGGTAAGTCTCAAG
AGTTCTTACTTGGTAATGATGCCCCACAAGAAGAGGAGGAAGTAGAGAGG
AACATTGAAGGCGGTCATCACTTCATGGCGACTCACAATCGTGAACAATC
TCTGGATATCGAGGAACAAAAGCTCATGGCTGCGACAAACAAGCTTGTGA
AATGGCTCAGAAATCGTCTTAGAAAACGACTGTCAGATGTTGCCGATTTG
GAAAGCGAAATAACAACTGAAAACGAGCTCTTGAAGAACTTGAGTGAAGA
AATCCAGGATGCATCGCGTGATAGAGAGGACGAGATCAAGCAAAAGCTAA
GGACAAAGAAAGAATTGTCTGACTTTCGAAGACACTCCAATCCTCCAGAT
GCAGGGGTGAACCGGGTTCGGAGTCAAACAAAGGCCTTATCAGAACAACT
CGAGAGACTAAAAGATGCGTATGAATCCATGACAATGAGACACAAGGATC
TCGAGAACAAGCTCAGGTCGGCCGGGTTTTCTCACTGGTTGGAAGCACGC
GGGAGGGACTATTTCCCCGATACAGCAATCGGTGTTCTTTCTAAGTCAGC
TCAAGTTTTGGGTCCAGTTTCTCATGGATTTCAAAGAGCTCTTTTATTTG
ACGATCGTCTTTCCACCGAGATGGAGCAAATCGTTCCTGGGTCAGATGAA
ACAATATTCGGCAAAATTGTCTGGGACATCACCATGATGGTCCCCTTTAT
TCCTTTTCTGCTGCTACTTCGTCTTGCTAGCGGCATGCTTCGATCTCTTT
CAGTTTATGATATTGTATTATGCGGGTCCGGCCTCTTTGCAGCTGAAAGT
GTTCTCTGCTTTGTAATGTCAGCATTTTTTGGTCGAGAAGTGCTTGGGAT
CTGCCAAGAAGTCAACGAATCAATTCTCGTTGCACTTCTGTTCGTCAATT
CTTCAGCATTCTTCATACTATTCCTCGCTCAAATTTTGATATCTTGTCTT
CGACCCTCCCGAGCAGAGGCTGTGCAAGCGATTCTGTTGTTTACTGTTGG
GTGTCGTTATTATCAGTATGTATTCCGGCCGGTGATGCTGAGCAAACCAG
TTATGGTCACGATTTTGAGTCACATTCTCTACATCATCACTTTCTCTCTC
ATTTTAGTCGAGAAGAAGCGAGTGATGAACTTCAAAACCCCATATGACCA
ATATTTTCAAAAGTTGATGATGGCAATTGAGGCTTGGGTATTTGATACTG
GCCATGCGATGCGCAATGTGTTCTCAGATATTGTGCCGTATGGCTCTCGT
ACCTACACAGAAATTGGATTTGGAAGCAGATCTTCTTTTTATGCCTCAGT
GTCGAATTGCGACATCAACTCTGAAGCTCACGAACGAATGTCGACTGACG
AAATCGAAGCTTTGGAGTGCAAGCCTCCTCCTCATGGTCCACAAAACACA
GAATATCTCGGGCAAAACAGATGGTATCCTGTGAACAGATCGGCTAGTCT
TATCAGGAAAACATTCACAGCGAGCCTGGAATACGGTGATCGCATAAATT
TAGCCCCTCCAGGCCTTAATACCATGGGAAGGGCGCAGAAAAAGTTCAGG
TCCAATTCAGATGATTCTTTAGTGTACCAATCATGTATGGAGTAA
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protein sequence of Gchil9043.t1

>Gchil9043.t1 ID=Gchil9043.t1|Name=Gchil9043.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=polypeptide|length=665bp
MNEKIVIITLFAALLIAPSNSMPRKARASGEIDSFEIPHSNARRDKGLPA
FDNPRASSGEAKLNEERSAHHHSPDHTAVIKMWQPKSNPNKRNSEANTVT
TREKNGTSTVIIPEASSDVPANKTTDTNFGKSQEFLLGNDAPQEEEEVER
NIEGGHHFMATHNREQSLDIEEQKLMAATNKLVKWLRNRLRKRLSDVADL
ESEITTENELLKNLSEEIQDASRDREDEIKQKLRTKKELSDFRRHSNPPD
AGVNRVRSQTKALSEQLERLKDAYESMTMRHKDLENKLRSAGFSHWLEAR
GRDYFPDTAIGVLSKSAQVLGPVSHGFQRALLFDDRLSTEMEQIVPGSDE
TIFGKIVWDITMMVPFIPFLLLLRLASGMLRSLSVYDIVLCGSGLFAAES
VLCFVMSAFFGREVLGICQEVNESILVALLFVNSSAFFILFLAQILISCL
RPSRAEAVQAILLFTVGCRYYQYVFRPVMLSKPVMVTILSHILYIITFSL
ILVEKKRVMNFKTPYDQYFQKLMMAIEAWVFDTGHAMRNVFSDIVPYGSR
TYTEIGFGSRSSFYASVSNCDINSEAHERMSTDEIEALECKPPPHGPQNT
EYLGQNRWYPVNRSASLIRKTFTASLEYGDRINLAPPGLNTMGRAQKKFR
SNSDDSLVYQSCME*
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mRNA from alignment at tig00004370_pilon:1107507..1109501-

Legend: polypeptideCDSexonstart_codonstop_codon
Hold the cursor over a type above to highlight its positions in the sequence below.
>Gchil9043.t1 ID=Gchil9043.t1|Name=Gchil9043.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=mRNA|length=1995bp|location=Sequence derived from alignment at tig00004370_pilon:1107507..1109501- (Gracilaria chilensis NLEC103_M9 male)
ATGAACGAAAAAATAGTAATCATCACTCTGTTTGCAGCTCTGCTCATCGC
TCCTAGCAATTCGATGCCACGAAAAGCTCGAGCATCAGGTGAAATAGACT
CATTCGAAATACCACACTCCAATGCGCGTCGCGACAAAGGACTCCCTGCC
TTCGACAATCCCCGAGCTAGTAGCGGTGAAGCAAAACTGAACGAAGAAAG
GTCAGCACACCACCACTCTCCGGACCATACCGCCGTCATTAAGATGTGGC
AACCGAAAAGTAATCCGAACAAGAGGAACTCCGAGGCGAACACGGTGACC
ACTCGGGAAAAGAATGGAACCTCGACCGTGATTATCCCTGAAGCTTCGAG
CGATGTACCTGCAAACAAAACCACCGACACAAACTTTGGTAAGTCTCAAG
AGTTCTTACTTGGTAATGATGCCCCACAAGAAGAGGAGGAAGTAGAGAGG
AACATTGAAGGCGGTCATCACTTCATGGCGACTCACAATCGTGAACAATC
TCTGGATATCGAGGAACAAAAGCTCATGGCTGCGACAAACAAGCTTGTGA
AATGGCTCAGAAATCGTCTTAGAAAACGACTGTCAGATGTTGCCGATTTG
GAAAGCGAAATAACAACTGAAAACGAGCTCTTGAAGAACTTGAGTGAAGA
AATCCAGGATGCATCGCGTGATAGAGAGGACGAGATCAAGCAAAAGCTAA
GGACAAAGAAAGAATTGTCTGACTTTCGAAGACACTCCAATCCTCCAGAT
GCAGGGGTGAACCGGGTTCGGAGTCAAACAAAGGCCTTATCAGAACAACT
CGAGAGACTAAAAGATGCGTATGAATCCATGACAATGAGACACAAGGATC
TCGAGAACAAGCTCAGGTCGGCCGGGTTTTCTCACTGGTTGGAAGCACGC
GGGAGGGACTATTTCCCCGATACAGCAATCGGTGTTCTTTCTAAGTCAGC
TCAAGTTTTGGGTCCAGTTTCTCATGGATTTCAAAGAGCTCTTTTATTTG
ACGATCGTCTTTCCACCGAGATGGAGCAAATCGTTCCTGGGTCAGATGAA
ACAATATTCGGCAAAATTGTCTGGGACATCACCATGATGGTCCCCTTTAT
TCCTTTTCTGCTGCTACTTCGTCTTGCTAGCGGCATGCTTCGATCTCTTT
CAGTTTATGATATTGTATTATGCGGGTCCGGCCTCTTTGCAGCTGAAAGT
GTTCTCTGCTTTGTAATGTCAGCATTTTTTGGTCGAGAAGTGCTTGGGAT
CTGCCAAGAAGTCAACGAATCAATTCTCGTTGCACTTCTGTTCGTCAATT
CTTCAGCATTCTTCATACTATTCCTCGCTCAAATTTTGATATCTTGTCTT
CGACCCTCCCGAGCAGAGGCTGTGCAAGCGATTCTGTTGTTTACTGTTGG
GTGTCGTTATTATCAGTATGTATTCCGGCCGGTGATGCTGAGCAAACCAG
TTATGGTCACGATTTTGAGTCACATTCTCTACATCATCACTTTCTCTCTC
ATTTTAGTCGAGAAGAAGCGAGTGATGAACTTCAAAACCCCATATGACCA
ATATTTTCAAAAGTTGATGATGGCAATTGAGGCTTGGGTATTTGATACTG
GCCATGCGATGCGCAATGTGTTCTCAGATATTGTGCCGTATGGCTCTCGT
ACCTACACAGAAATTGGATTTGGAAGCAGATCTTCTTTTTATGCCTCAGT
GTCGAATTGCGACATCAACTCTGAAGCTCACGAACGAATGTCGACTGACG
AAATCGAAGCTTTGGAGTGCAAGCCTCCTCCTCATGGTCCACAAAACACA
GAATATCTCGGGCAAAACAGATGGTATCCTGTGAACAGATCGGCTAGTCT
TATCAGGAAAACATTCACAGCGAGCCTGGAATACGGTGATCGCATAAATT
TAGCCCCTCCAGGCCTTAATACCATGGGAAGGGCGCAGAAAAAGTTCAGG
TCCAATTCAGATGATTCTTTAGTGTACCAATCATGTATGGAGTAA
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Coding sequence (CDS) from alignment at tig00004370_pilon:1107507..1109501-

>Gchil9043.t1 ID=Gchil9043.t1|Name=Gchil9043.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=CDS|length=1995bp|location=Sequence derived from alignment at tig00004370_pilon:1107507..1109501- (Gracilaria chilensis NLEC103_M9 male)
ATGAACGAAAAAATAGTAATCATCACTCTGTTTGCAGCTCTGCTCATCGC
TCCTAGCAATTCGATGCCACGAAAAGCTCGAGCATCAGGTGAAATAGACT
CATTCGAAATACCACACTCCAATGCGCGTCGCGACAAAGGACTCCCTGCC
TTCGACAATCCCCGAGCTAGTAGCGGTGAAGCAAAACTGAACGAAGAAAG
GTCAGCACACCACCACTCTCCGGACCATACCGCCGTCATTAAGATGTGGC
AACCGAAAAGTAATCCGAACAAGAGGAACTCCGAGGCGAACACGGTGACC
ACTCGGGAAAAGAATGGAACCTCGACCGTGATTATCCCTGAAGCTTCGAG
CGATGTACCTGCAAACAAAACCACCGACACAAACTTTGGTAAGTCTCAAG
AGTTCTTACTTGGTAATGATGCCCCACAAGAAGAGGAGGAAGTAGAGAGG
AACATTGAAGGCGGTCATCACTTCATGGCGACTCACAATCGTGAACAATC
TCTGGATATCGAGGAACAAAAGCTCATGGCTGCGACAAACAAGCTTGTGA
AATGGCTCAGAAATCGTCTTAGAAAACGACTGTCAGATGTTGCCGATTTG
GAAAGCGAAATAACAACTGAAAACGAGCTCTTGAAGAACTTGAGTGAAGA
AATCCAGGATGCATCGCGTGATAGAGAGGACGAGATCAAGCAAAAGCTAA
GGACAAAGAAAGAATTGTCTGACTTTCGAAGACACTCCAATCCTCCAGAT
GCAGGGGTGAACCGGGTTCGGAGTCAAACAAAGGCCTTATCAGAACAACT
CGAGAGACTAAAAGATGCGTATGAATCCATGACAATGAGACACAAGGATC
TCGAGAACAAGCTCAGGTCGGCCGGGTTTTCTCACTGGTTGGAAGCACGC
GGGAGGGACTATTTCCCCGATACAGCAATCGGTGTTCTTTCTAAGTCAGC
TCAAGTTTTGGGTCCAGTTTCTCATGGATTTCAAAGAGCTCTTTTATTTG
ACGATCGTCTTTCCACCGAGATGGAGCAAATCGTTCCTGGGTCAGATGAA
ACAATATTCGGCAAAATTGTCTGGGACATCACCATGATGGTCCCCTTTAT
TCCTTTTCTGCTGCTACTTCGTCTTGCTAGCGGCATGCTTCGATCTCTTT
CAGTTTATGATATTGTATTATGCGGGTCCGGCCTCTTTGCAGCTGAAAGT
GTTCTCTGCTTTGTAATGTCAGCATTTTTTGGTCGAGAAGTGCTTGGGAT
CTGCCAAGAAGTCAACGAATCAATTCTCGTTGCACTTCTGTTCGTCAATT
CTTCAGCATTCTTCATACTATTCCTCGCTCAAATTTTGATATCTTGTCTT
CGACCCTCCCGAGCAGAGGCTGTGCAAGCGATTCTGTTGTTTACTGTTGG
GTGTCGTTATTATCAGTATGTATTCCGGCCGGTGATGCTGAGCAAACCAG
TTATGGTCACGATTTTGAGTCACATTCTCTACATCATCACTTTCTCTCTC
ATTTTAGTCGAGAAGAAGCGAGTGATGAACTTCAAAACCCCATATGACCA
ATATTTTCAAAAGTTGATGATGGCAATTGAGGCTTGGGTATTTGATACTG
GCCATGCGATGCGCAATGTGTTCTCAGATATTGTGCCGTATGGCTCTCGT
ACCTACACAGAAATTGGATTTGGAAGCAGATCTTCTTTTTATGCCTCAGT
GTCGAATTGCGACATCAACTCTGAAGCTCACGAACGAATGTCGACTGACG
AAATCGAAGCTTTGGAGTGCAAGCCTCCTCCTCATGGTCCACAAAACACA
GAATATCTCGGGCAAAACAGATGGTATCCTGTGAACAGATCGGCTAGTCT
TATCAGGAAAACATTCACAGCGAGCCTGGAATACGGTGATCGCATAAATT
TAGCCCCTCCAGGCCTTAATACCATGGGAAGGGCGCAGAAAAAGTTCAGG
TCCAATTCAGATGATTCTTTAGTGTACCAATCATGTATGGAGTAA
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