Gchil9043.t1 (polypeptide) Gracilaria chilensis NLEC103_M9 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGchil9043.t1
Unique NameGchil9043.t1
Typepolypeptide
OrganismGracilaria chilensis NLEC103_M9 male (Gracilaria chilensis NLEC103_M9 male)
Sequence length665
Homology
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BLAST of Gchil9043.t1 vs. uniprot
Match: A0A2V3IUU0_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IUU0_9FLOR)

HSP 1 Score: 534 bits (1376), Expect = 1.760e-179
Identity = 282/512 (55.08%), Postives = 381/512 (74.41%), Query Frame = 0 
Query:  157 HFMATHNREQSLDIEEQKLMAATNKLVKWLRNRLRKRLSDVADLESEITTENELLKNLSEEIQDASRDREDEIKQKLRTKKELSDFRRHSNPPDAGVNRVRSQTKALSEQLERLKDAYESMTMRHKDLENKLRSAGFSHWLEARGRDYFPDTAIGVLSKSAQVLGPVSHGFQRALLFDDRLSTEMEQIVPGSDETIFGKIVWDITMMVPFIPFLLLLRLASGMLRSLSVYDIVLCGSGLFAAESVLCFVMSAFFGREVLGICQEVNESILVALLFVNSSAFFILFLAQILISCLRPSRAEAVQAILLFTVGCRYYQYVFRPVMLSKPVMVTILSHILYIITFSLILVEKKRVMNFKTPYDQYFQKLMMAIEAWVFDTGHAMRNVFSDIVPYGSRTYTEIGFGSRSSFYASVSNCDINSEAHERMSTDE----IEALECKPPPHGPQNTEYLGQNRWYPVNRSASLIRKTFTASLEYGDRINLAPPGLNTMGRAQKKFRSNSDDSLVYQSCME 664
            H   T  +E+ LD EEQKL  ATNKLVKWLRNRLRKRL DVA+LE E+TTEN LL+NL  EI+D S +R+ EI++K+ T+KELS+FRRHS  PDA + RV+SQT ALSEQ       YESM  RHKDL++KLRSAG +HWLEARG++YFP+TA+GVLSKSAQ+LGPV+HGFQ+ +  DD LS ++E+++ GSDE ++G IVWD+TM++PF+PFL LLR+A      +S++ IVLCGS LFAAES + F++S F G+EVL + Q+VNE+ILVAL+ +N+  + ++  +Q+LISCL  SR E +Q IL+FT+G RYY +VF+P ML +P+M+T++SHI++I+TFSL+ +EKKR++++KTPYD YF KL++  + WV DT  AM NVFSDIVP+GSR  T   +GS++S YAS  + D + +  + +S ++    +  L+        +N+ YLG NRWY VNRSASLIRKTFTAS  YGD ++         G AQ+  RS+S++S  YQSC E
Sbjct:  164 HVEGTATQERELDAEEQKLKLATNKLVKWLRNRLRKRLEDVANLEHEMTTENVLLENLESEIKDTSEERKSEIREKIATQKELSEFRRHSTSPDATMERVKSQTTALSEQXXXXXXXYESMAARHKDLKDKLRSAGLTHWLEARGKEYFPETAVGVLSKSAQILGPVTHGFQKVVSLDDMLSRKVERVMHGSDEGMYGSIVWDLTMLIPFVPFLCLLRVADHAFHHVSMFHIVLCGSALFAAESFISFILSVFLGKEVLSVTQKVNETILVALVLLNAVLYTLVLFSQVLISCLHSSRNEGIQVILMFTIGYRYYYHVFQPAMLGRPIMITLMSHIVHILTFSLVFIEKKRLLDYKTPYDLYFNKLILGTKDWVMDTFQAMLNVFSDIVPHGSRARTS-EYGSQTS-YASTFDGDHSFQTIKPVSEEDEQRTVSLLQ--------ENSRYLGHNRWYEVNRSASLIRKTFTASQLYGDHMHSTVKSTGK-GTAQETCRSSSNNSAAYQSCRE 664
The following BLAST results are available for this feature:
BLAST of Gchil9043.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A2V3IUU0_9FLOR1.760e-17955.08Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 253..287
NoneNo IPR availableCOILSCoilCoilcoord: 197..231
NoneNo IPR availableCOILSCoilCoilcoord: 168..188
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 37..104
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 83..104
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 59..77
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 444..454
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..28
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 17..28
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 473..483
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 455..472
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 377..387
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 504..664
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..4
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 388..410
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 425..443
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 356..376
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 411..424
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 484..503
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 29..355
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 5..16
NoneNo IPR availableTMHMMTMhelixcoord: 460..479
NoneNo IPR availableTMHMMTMhelixcoord: 484..503
NoneNo IPR availableTMHMMTMhelixcoord: 356..375
NoneNo IPR availableTMHMMTMhelixcoord: 388..410
NoneNo IPR availableTMHMMTMhelixcoord: 425..447

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00004370_piloncontigtig00004370_pilon:1107507..1109501 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria chilensis NLEC103_M9 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gchil9043.t1Gchil9043.t1Gracilaria chilensis NLEC103_M9 malemRNAtig00004370_pilon 1107507..1109501 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gchil9043.t1 ID=Gchil9043.t1|Name=Gchil9043.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=polypeptide|length=665bp
MNEKIVIITLFAALLIAPSNSMPRKARASGEIDSFEIPHSNARRDKGLPA
FDNPRASSGEAKLNEERSAHHHSPDHTAVIKMWQPKSNPNKRNSEANTVT
TREKNGTSTVIIPEASSDVPANKTTDTNFGKSQEFLLGNDAPQEEEEVER
NIEGGHHFMATHNREQSLDIEEQKLMAATNKLVKWLRNRLRKRLSDVADL
ESEITTENELLKNLSEEIQDASRDREDEIKQKLRTKKELSDFRRHSNPPD
AGVNRVRSQTKALSEQLERLKDAYESMTMRHKDLENKLRSAGFSHWLEAR
GRDYFPDTAIGVLSKSAQVLGPVSHGFQRALLFDDRLSTEMEQIVPGSDE
TIFGKIVWDITMMVPFIPFLLLLRLASGMLRSLSVYDIVLCGSGLFAAES
VLCFVMSAFFGREVLGICQEVNESILVALLFVNSSAFFILFLAQILISCL
RPSRAEAVQAILLFTVGCRYYQYVFRPVMLSKPVMVTILSHILYIITFSL
ILVEKKRVMNFKTPYDQYFQKLMMAIEAWVFDTGHAMRNVFSDIVPYGSR
TYTEIGFGSRSSFYASVSNCDINSEAHERMSTDEIEALECKPPPHGPQNT
EYLGQNRWYPVNRSASLIRKTFTASLEYGDRINLAPPGLNTMGRAQKKFR
SNSDDSLVYQSCME*
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