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Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Property Name | Value |
Seed ortholog | 130081.XP_005709304.1 |
PFAMs | Mito_carr |
Max annot lvl | 2759|Eukaryota |
KEGG ko | ko:K15111 |
KEGG TC | 2.A.29.18 |
Evalue | 2.02e-88 |
EggNOG OGs | KOG0768@1|root,KOG0768@2759|Eukaryota |
Description | S-adenosyl-L-methionine transmembrane transport |
COG category | U |
BRITE | ko00000,ko02000 |
Relationships
This mRNA is a part of the following gene feature(s):
The following stop_codon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
The following start_codon feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >Gchil10123.t1 ID=Gchil10123.t1|Name=Gchil10123.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=mRNA|length=317bp MGVCPPLLCPRRSRQVLLASSNAELPETVTPIETFRIALGAGAVAGFTVD AVLFPLDTLKTRMQLASTVASKSSAALLSGLYAGFGPAVVASAPAAAAFF GVYDYVKHVLEDFVGKNKPHYAPLCHMIAAAAGDVAGSTVRAPFEVVKQR VQSGLYVGAGAAVRGTFAKEGLGGFYTGYGSLVIRELPFDAIQFPLYEYL KSVVKKRKGTDCLETWESSACGSVAGAISAALTTPLDVVKTRLMTQNVAA PKYEGIVHGISTIAREEGPKALMAGVVPRVMWISIGGAVFFGAYEAAKKI LQPVIVKRSREGGKKP* back to topspliced messenger RNA >Gchil10123.t1 ID=Gchil10123.t1|Name=Gchil10123.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=mRNA|length=951bp|location=Sequence derived from alignment at tig00004442_pilon:1087260..1088210- (Gracilaria chilensis NLEC103_M9 male)|Notes=Excludes all bases but those of type(s): exon.
ATGGGTGTGTGTCCCCCATTACTATGTCCCAGAAGATCTCGGCAAGTGCT GTTGGCCAGCTCTAATGCAGAACTGCCGGAGACTGTCACGCCTATAGAAA CATTTCGAATCGCTCTTGGCGCAGGAGCGGTGGCAGGCTTCACAGTGGAT GCGGTTCTTTTCCCTCTAGACACGTTAAAAACAAGGATGCAATTGGCATC CACTGTAGCTTCAAAATCATCAGCTGCATTATTGTCTGGTCTGTATGCAG GTTTCGGACCTGCTGTGGTAGCGTCTGCCCCAGCGGCTGCGGCATTCTTT GGGGTATATGACTACGTTAAACATGTGTTGGAAGATTTTGTCGGGAAGAA CAAACCACACTATGCGCCACTTTGTCATATGATTGCGGCTGCTGCTGGAG ATGTCGCCGGTTCTACGGTGAGAGCGCCGTTTGAAGTTGTGAAACAACGG GTACAATCAGGATTATACGTGGGAGCTGGAGCCGCTGTTCGTGGCACGTT TGCAAAAGAAGGACTCGGGGGTTTTTACACTGGATACGGAAGCCTAGTGA TCCGAGAATTACCATTCGATGCAATACAATTCCCGCTTTACGAATATCTG AAAAGCGTAGTCAAGAAAAGAAAGGGAACGGATTGTTTGGAGACGTGGGA AAGTTCTGCATGCGGGTCCGTGGCCGGTGCAATTTCAGCCGCTTTGACTA CTCCGTTAGACGTAGTGAAGACCAGGCTGATGACGCAGAATGTGGCGGCG CCAAAGTATGAGGGAATTGTGCATGGAATTAGTACGATTGCTAGAGAGGA AGGGCCGAAAGCGTTGATGGCAGGCGTGGTTCCGAGAGTGATGTGGATTT CGATTGGTGGTGCCGTGTTCTTCGGCGCTTATGAAGCCGCTAAGAAGATT TTGCAGCCGGTGATTGTGAAGCGTTCGAGGGAGGGCGGGAAGAAGCCTTA G back to topprotein sequence of Gchil10123.t1 >Gchil10123.t1 ID=Gchil10123.t1|Name=Gchil10123.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=polypeptide|length=317bp
MGVCPPLLCPRRSRQVLLASSNAELPETVTPIETFRIALGAGAVAGFTVD AVLFPLDTLKTRMQLASTVASKSSAALLSGLYAGFGPAVVASAPAAAAFF GVYDYVKHVLEDFVGKNKPHYAPLCHMIAAAAGDVAGSTVRAPFEVVKQR VQSGLYVGAGAAVRGTFAKEGLGGFYTGYGSLVIRELPFDAIQFPLYEYL KSVVKKRKGTDCLETWESSACGSVAGAISAALTTPLDVVKTRLMTQNVAA PKYEGIVHGISTIAREEGPKALMAGVVPRVMWISIGGAVFFGAYEAAKKI LQPVIVKRSREGGKKP* back to topmRNA from alignment at tig00004442_pilon:1087260..1088210- Legend: polypeptideCDSexonstart_codonstop_codon Hold the cursor over a type above to highlight its positions in the sequence below. >Gchil10123.t1 ID=Gchil10123.t1|Name=Gchil10123.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=mRNA|length=951bp|location=Sequence derived from alignment at tig00004442_pilon:1087260..1088210- (Gracilaria chilensis NLEC103_M9 male) ATGGGTGTGTGTCCCCCATTACTATGTCCCAGAAGATCTCGGCAAGTGCT
GTTGGCCAGCTCTAATGCAGAACTGCCGGAGACTGTCACGCCTATAGAAA
CATTTCGAATCGCTCTTGGCGCAGGAGCGGTGGCAGGCTTCACAGTGGAT
GCGGTTCTTTTCCCTCTAGACACGTTAAAAACAAGGATGCAATTGGCATC
CACTGTAGCTTCAAAATCATCAGCTGCATTATTGTCTGGTCTGTATGCAG
GTTTCGGACCTGCTGTGGTAGCGTCTGCCCCAGCGGCTGCGGCATTCTTT
GGGGTATATGACTACGTTAAACATGTGTTGGAAGATTTTGTCGGGAAGAA
CAAACCACACTATGCGCCACTTTGTCATATGATTGCGGCTGCTGCTGGAG
ATGTCGCCGGTTCTACGGTGAGAGCGCCGTTTGAAGTTGTGAAACAACGG
GTACAATCAGGATTATACGTGGGAGCTGGAGCCGCTGTTCGTGGCACGTT
TGCAAAAGAAGGACTCGGGGGTTTTTACACTGGATACGGAAGCCTAGTGA
TCCGAGAATTACCATTCGATGCAATACAATTCCCGCTTTACGAATATCTG
AAAAGCGTAGTCAAGAAAAGAAAGGGAACGGATTGTTTGGAGACGTGGGA
AAGTTCTGCATGCGGGTCCGTGGCCGGTGCAATTTCAGCCGCTTTGACTA
CTCCGTTAGACGTAGTGAAGACCAGGCTGATGACGCAGAATGTGGCGGCG
CCAAAGTATGAGGGAATTGTGCATGGAATTAGTACGATTGCTAGAGAGGA
AGGGCCGAAAGCGTTGATGGCAGGCGTGGTTCCGAGAGTGATGTGGATTT
CGATTGGTGGTGCCGTGTTCTTCGGCGCTTATGAAGCCGCTAAGAAGATT
TTGCAGCCGGTGATTGTGAAGCGTTCGAGGGAGGGCGGGAAGAAGCCTTA
G back to topCoding sequence (CDS) from alignment at tig00004442_pilon:1087260..1088210- >Gchil10123.t1 ID=Gchil10123.t1|Name=Gchil10123.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=CDS|length=951bp|location=Sequence derived from alignment at tig00004442_pilon:1087260..1088210- (Gracilaria chilensis NLEC103_M9 male) ATGGGTGTGTGTCCCCCATTACTATGTCCCAGAAGATCTCGGCAAGTGCT GTTGGCCAGCTCTAATGCAGAACTGCCGGAGACTGTCACGCCTATAGAAA CATTTCGAATCGCTCTTGGCGCAGGAGCGGTGGCAGGCTTCACAGTGGAT GCGGTTCTTTTCCCTCTAGACACGTTAAAAACAAGGATGCAATTGGCATC CACTGTAGCTTCAAAATCATCAGCTGCATTATTGTCTGGTCTGTATGCAG GTTTCGGACCTGCTGTGGTAGCGTCTGCCCCAGCGGCTGCGGCATTCTTT GGGGTATATGACTACGTTAAACATGTGTTGGAAGATTTTGTCGGGAAGAA CAAACCACACTATGCGCCACTTTGTCATATGATTGCGGCTGCTGCTGGAG ATGTCGCCGGTTCTACGGTGAGAGCGCCGTTTGAAGTTGTGAAACAACGG GTACAATCAGGATTATACGTGGGAGCTGGAGCCGCTGTTCGTGGCACGTT TGCAAAAGAAGGACTCGGGGGTTTTTACACTGGATACGGAAGCCTAGTGA TCCGAGAATTACCATTCGATGCAATACAATTCCCGCTTTACGAATATCTG AAAAGCGTAGTCAAGAAAAGAAAGGGAACGGATTGTTTGGAGACGTGGGA AAGTTCTGCATGCGGGTCCGTGGCCGGTGCAATTTCAGCCGCTTTGACTA CTCCGTTAGACGTAGTGAAGACCAGGCTGATGACGCAGAATGTGGCGGCG CCAAAGTATGAGGGAATTGTGCATGGAATTAGTACGATTGCTAGAGAGGA AGGGCCGAAAGCGTTGATGGCAGGCGTGGTTCCGAGAGTGATGTGGATTT CGATTGGTGGTGCCGTGTTCTTCGGCGCTTATGAAGCCGCTAAGAAGATT TTGCAGCCGGTGATTGTGAAGCGTTCGAGGGAGGGCGGGAAGAAGCCTTA G back to top
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