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Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Property Name | Value |
Seed ortholog | 45157.CMH064CT |
PFAMs | DEP,DUF547 |
Max annot lvl | 2759|Eukaryota |
Evalue | 1.65e-126 |
EggNOG OGs | 28JT7@1|root,2QS72@2759|Eukaryota |
Description | protein disulfide oxidoreductase activity |
COG category | S |
Relationships
This mRNA is a part of the following gene feature(s):
The following start_codon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
The following stop_codon feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >Gchil10003.t1 ID=Gchil10003.t1|Name=Gchil10003.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=mRNA|length=629bp MYSTTGRKRKALEQVVPGVVPNHSSQFAVYSQSSAAATTNPFDNEHYPIP DFERVYTLMRDPKKGVPLADRRWRLSTYSKCFIGKEAVQWMVSNLSIDRK AAVETGQKLMDAGILHHVTHSEPFSDAYFFYRFQEDDDGNVLNMKRIWDS NIPTRHAVVVAKDLLTCLACLCEEHRKRILEAGASSDKIQTTRSAHMILA SQPVTPLLDPTARNEPTDPVSSPNLFRSLSTPRLPSSGSPMIFSPSLQRR ASQSKRPRKKDDDVDYSSLAKSEQFRKYTLAAAELQHVQLVALNQDERLA FFVNVYNALCLHAHVVHGHPNSVFRRYVFFRVLSYRVAGLDMTLDDIEHG ILRGNKKPPMLKFIQQLRPSDPKCQHVLTNRDGRIHFVISAGTKSDPPIR ILDGENVQEELDDASVEFLSCSVKVDVEKRTVTLPRIFYWYSDDFPSPEN NLLLWVASYLSVETSHQLVTIVNDDGPQPVLSYADFDWSNPEARFNASVV RRKRRRLERECDLDDGQQDAIDLSLQMHIGDMSSIFSAQPGASEDLFKNS HMSSPMIFAANGSNEVKQSPTLLNNTPSAGGRSQEDSSKRLTPDIMNVSQ PEAPTLKSSENGSSTNAAATAAAAASPA* back to topspliced messenger RNA >Gchil10003.t1 ID=Gchil10003.t1|Name=Gchil10003.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=mRNA|length=1887bp|location=Sequence derived from alignment at tig00004442_pilon:222678..224564+ (Gracilaria chilensis NLEC103_M9 male)|Notes=Excludes all bases but those of type(s): exon.
ATGTACTCTACAACCGGGCGGAAACGAAAAGCTCTGGAACAGGTGGTGCC TGGTGTCGTTCCCAACCACAGCTCCCAATTCGCCGTATACTCTCAGTCTT CCGCTGCCGCAACAACAAATCCTTTCGACAATGAGCACTACCCCATTCCG GACTTCGAGCGTGTATATACGCTAATGCGTGATCCGAAGAAAGGTGTCCC ACTCGCAGACCGTCGCTGGAGACTCAGTACGTACTCAAAGTGCTTCATAG GCAAAGAAGCCGTGCAATGGATGGTTAGCAACCTCTCGATAGATCGAAAA GCCGCTGTGGAAACAGGACAAAAGCTCATGGACGCTGGTATTTTGCACCA TGTTACCCATTCAGAACCATTTTCCGACGCTTACTTCTTCTACCGCTTCC AAGAAGATGATGATGGAAATGTGCTCAACATGAAGCGAATATGGGATTCC AATATTCCCACTAGACATGCAGTTGTTGTTGCCAAAGATCTCCTCACGTG TTTGGCGTGCTTGTGCGAAGAACATCGCAAGCGAATTCTCGAAGCGGGTG CTAGTTCGGATAAAATTCAGACAACCAGATCCGCCCACATGATACTTGCC TCTCAGCCAGTTACTCCGCTATTAGATCCAACCGCTCGCAATGAGCCTAC GGACCCAGTCTCCTCGCCCAATTTGTTTCGATCGCTCTCTACTCCCCGTT TACCTTCCTCAGGATCCCCCATGATATTTTCACCCTCTTTACAAAGACGT GCTTCTCAATCAAAGCGCCCAAGAAAGAAGGATGATGATGTTGATTACTC GTCCTTAGCCAAAAGCGAACAGTTTCGCAAATATACGCTGGCTGCGGCGG AATTACAACACGTTCAGTTGGTTGCACTTAACCAAGACGAAAGGCTTGCT TTTTTTGTGAATGTGTACAACGCTCTATGTTTACATGCGCACGTAGTCCA CGGACATCCAAATAGCGTTTTTCGCCGTTATGTCTTCTTTCGAGTATTAT CTTATAGGGTAGCCGGACTAGATATGACTTTGGATGATATTGAACATGGT ATACTAAGGGGGAATAAGAAACCTCCAATGTTGAAGTTTATTCAACAACT AAGACCTTCAGATCCAAAATGTCAACATGTACTCACAAATCGAGATGGTC GCATTCATTTCGTGATATCCGCTGGCACGAAATCGGACCCACCTATCCGA ATCCTTGACGGTGAGAATGTGCAAGAGGAACTTGATGACGCTTCCGTTGA GTTTCTGAGCTGCTCAGTCAAGGTAGACGTCGAGAAGCGTACGGTTACAC TTCCACGGATCTTTTATTGGTATTCTGACGATTTTCCGAGCCCTGAAAAT AACCTATTGTTGTGGGTGGCCTCATATCTTTCTGTTGAAACATCGCATCA ACTCGTCACCATCGTGAACGATGATGGGCCACAACCCGTGTTGTCTTATG CAGACTTTGATTGGTCAAACCCGGAAGCAAGATTTAATGCATCTGTTGTA CGAAGAAAGCGGAGAAGACTAGAAAGAGAGTGTGATCTCGATGACGGTCA ACAAGATGCAATTGACCTTAGTCTCCAGATGCACATTGGAGACATGTCCT CCATATTTTCTGCACAGCCTGGTGCTAGCGAAGACTTGTTCAAGAATAGC CATATGAGTTCTCCAATGATATTTGCAGCAAACGGATCAAATGAAGTTAA ACAATCTCCGACGTTGCTCAACAACACGCCAAGCGCTGGAGGTCGATCTC AGGAAGACTCCTCCAAAAGGTTAACTCCTGATATAATGAATGTAAGCCAG CCAGAGGCTCCAACCTTGAAGAGTAGTGAAAATGGGTCCAGTACAAAtgc ggctgctacagctgctgctgccgcCTCACCGGCGTGA back to topprotein sequence of Gchil10003.t1 >Gchil10003.t1 ID=Gchil10003.t1|Name=Gchil10003.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=polypeptide|length=629bp
MYSTTGRKRKALEQVVPGVVPNHSSQFAVYSQSSAAATTNPFDNEHYPIP DFERVYTLMRDPKKGVPLADRRWRLSTYSKCFIGKEAVQWMVSNLSIDRK AAVETGQKLMDAGILHHVTHSEPFSDAYFFYRFQEDDDGNVLNMKRIWDS NIPTRHAVVVAKDLLTCLACLCEEHRKRILEAGASSDKIQTTRSAHMILA SQPVTPLLDPTARNEPTDPVSSPNLFRSLSTPRLPSSGSPMIFSPSLQRR ASQSKRPRKKDDDVDYSSLAKSEQFRKYTLAAAELQHVQLVALNQDERLA FFVNVYNALCLHAHVVHGHPNSVFRRYVFFRVLSYRVAGLDMTLDDIEHG ILRGNKKPPMLKFIQQLRPSDPKCQHVLTNRDGRIHFVISAGTKSDPPIR ILDGENVQEELDDASVEFLSCSVKVDVEKRTVTLPRIFYWYSDDFPSPEN NLLLWVASYLSVETSHQLVTIVNDDGPQPVLSYADFDWSNPEARFNASVV RRKRRRLERECDLDDGQQDAIDLSLQMHIGDMSSIFSAQPGASEDLFKNS HMSSPMIFAANGSNEVKQSPTLLNNTPSAGGRSQEDSSKRLTPDIMNVSQ PEAPTLKSSENGSSTNAAATAAAAASPA* back to topmRNA from alignment at tig00004442_pilon:222678..224564+ Legend: start_codonpolypeptideCDSexonstop_codon Hold the cursor over a type above to highlight its positions in the sequence below. >Gchil10003.t1 ID=Gchil10003.t1|Name=Gchil10003.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=mRNA|length=1887bp|location=Sequence derived from alignment at tig00004442_pilon:222678..224564+ (Gracilaria chilensis NLEC103_M9 male) ATGTACTCTACAACCGGGCGGAAACGAAAAGCTCTGGAACAGGTGGTGCC
TGGTGTCGTTCCCAACCACAGCTCCCAATTCGCCGTATACTCTCAGTCTT
CCGCTGCCGCAACAACAAATCCTTTCGACAATGAGCACTACCCCATTCCG
GACTTCGAGCGTGTATATACGCTAATGCGTGATCCGAAGAAAGGTGTCCC
ACTCGCAGACCGTCGCTGGAGACTCAGTACGTACTCAAAGTGCTTCATAG
GCAAAGAAGCCGTGCAATGGATGGTTAGCAACCTCTCGATAGATCGAAAA
GCCGCTGTGGAAACAGGACAAAAGCTCATGGACGCTGGTATTTTGCACCA
TGTTACCCATTCAGAACCATTTTCCGACGCTTACTTCTTCTACCGCTTCC
AAGAAGATGATGATGGAAATGTGCTCAACATGAAGCGAATATGGGATTCC
AATATTCCCACTAGACATGCAGTTGTTGTTGCCAAAGATCTCCTCACGTG
TTTGGCGTGCTTGTGCGAAGAACATCGCAAGCGAATTCTCGAAGCGGGTG
CTAGTTCGGATAAAATTCAGACAACCAGATCCGCCCACATGATACTTGCC
TCTCAGCCAGTTACTCCGCTATTAGATCCAACCGCTCGCAATGAGCCTAC
GGACCCAGTCTCCTCGCCCAATTTGTTTCGATCGCTCTCTACTCCCCGTT
TACCTTCCTCAGGATCCCCCATGATATTTTCACCCTCTTTACAAAGACGT
GCTTCTCAATCAAAGCGCCCAAGAAAGAAGGATGATGATGTTGATTACTC
GTCCTTAGCCAAAAGCGAACAGTTTCGCAAATATACGCTGGCTGCGGCGG
AATTACAACACGTTCAGTTGGTTGCACTTAACCAAGACGAAAGGCTTGCT
TTTTTTGTGAATGTGTACAACGCTCTATGTTTACATGCGCACGTAGTCCA
CGGACATCCAAATAGCGTTTTTCGCCGTTATGTCTTCTTTCGAGTATTAT
CTTATAGGGTAGCCGGACTAGATATGACTTTGGATGATATTGAACATGGT
ATACTAAGGGGGAATAAGAAACCTCCAATGTTGAAGTTTATTCAACAACT
AAGACCTTCAGATCCAAAATGTCAACATGTACTCACAAATCGAGATGGTC
GCATTCATTTCGTGATATCCGCTGGCACGAAATCGGACCCACCTATCCGA
ATCCTTGACGGTGAGAATGTGCAAGAGGAACTTGATGACGCTTCCGTTGA
GTTTCTGAGCTGCTCAGTCAAGGTAGACGTCGAGAAGCGTACGGTTACAC
TTCCACGGATCTTTTATTGGTATTCTGACGATTTTCCGAGCCCTGAAAAT
AACCTATTGTTGTGGGTGGCCTCATATCTTTCTGTTGAAACATCGCATCA
ACTCGTCACCATCGTGAACGATGATGGGCCACAACCCGTGTTGTCTTATG
CAGACTTTGATTGGTCAAACCCGGAAGCAAGATTTAATGCATCTGTTGTA
CGAAGAAAGCGGAGAAGACTAGAAAGAGAGTGTGATCTCGATGACGGTCA
ACAAGATGCAATTGACCTTAGTCTCCAGATGCACATTGGAGACATGTCCT
CCATATTTTCTGCACAGCCTGGTGCTAGCGAAGACTTGTTCAAGAATAGC
CATATGAGTTCTCCAATGATATTTGCAGCAAACGGATCAAATGAAGTTAA
ACAATCTCCGACGTTGCTCAACAACACGCCAAGCGCTGGAGGTCGATCTC
AGGAAGACTCCTCCAAAAGGTTAACTCCTGATATAATGAATGTAAGCCAG
CCAGAGGCTCCAACCTTGAAGAGTAGTGAAAATGGGTCCAGTACAAAtgc
ggctgctacagctgctgctgccgcCTCACCGGCGTGA back to topCoding sequence (CDS) from alignment at tig00004442_pilon:222678..224564+ >Gchil10003.t1 ID=Gchil10003.t1|Name=Gchil10003.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=CDS|length=1887bp|location=Sequence derived from alignment at tig00004442_pilon:222678..224564+ (Gracilaria chilensis NLEC103_M9 male) ATGTACTCTACAACCGGGCGGAAACGAAAAGCTCTGGAACAGGTGGTGCC TGGTGTCGTTCCCAACCACAGCTCCCAATTCGCCGTATACTCTCAGTCTT CCGCTGCCGCAACAACAAATCCTTTCGACAATGAGCACTACCCCATTCCG GACTTCGAGCGTGTATATACGCTAATGCGTGATCCGAAGAAAGGTGTCCC ACTCGCAGACCGTCGCTGGAGACTCAGTACGTACTCAAAGTGCTTCATAG GCAAAGAAGCCGTGCAATGGATGGTTAGCAACCTCTCGATAGATCGAAAA GCCGCTGTGGAAACAGGACAAAAGCTCATGGACGCTGGTATTTTGCACCA TGTTACCCATTCAGAACCATTTTCCGACGCTTACTTCTTCTACCGCTTCC AAGAAGATGATGATGGAAATGTGCTCAACATGAAGCGAATATGGGATTCC AATATTCCCACTAGACATGCAGTTGTTGTTGCCAAAGATCTCCTCACGTG TTTGGCGTGCTTGTGCGAAGAACATCGCAAGCGAATTCTCGAAGCGGGTG CTAGTTCGGATAAAATTCAGACAACCAGATCCGCCCACATGATACTTGCC TCTCAGCCAGTTACTCCGCTATTAGATCCAACCGCTCGCAATGAGCCTAC GGACCCAGTCTCCTCGCCCAATTTGTTTCGATCGCTCTCTACTCCCCGTT TACCTTCCTCAGGATCCCCCATGATATTTTCACCCTCTTTACAAAGACGT GCTTCTCAATCAAAGCGCCCAAGAAAGAAGGATGATGATGTTGATTACTC GTCCTTAGCCAAAAGCGAACAGTTTCGCAAATATACGCTGGCTGCGGCGG AATTACAACACGTTCAGTTGGTTGCACTTAACCAAGACGAAAGGCTTGCT TTTTTTGTGAATGTGTACAACGCTCTATGTTTACATGCGCACGTAGTCCA CGGACATCCAAATAGCGTTTTTCGCCGTTATGTCTTCTTTCGAGTATTAT CTTATAGGGTAGCCGGACTAGATATGACTTTGGATGATATTGAACATGGT ATACTAAGGGGGAATAAGAAACCTCCAATGTTGAAGTTTATTCAACAACT AAGACCTTCAGATCCAAAATGTCAACATGTACTCACAAATCGAGATGGTC GCATTCATTTCGTGATATCCGCTGGCACGAAATCGGACCCACCTATCCGA ATCCTTGACGGTGAGAATGTGCAAGAGGAACTTGATGACGCTTCCGTTGA GTTTCTGAGCTGCTCAGTCAAGGTAGACGTCGAGAAGCGTACGGTTACAC TTCCACGGATCTTTTATTGGTATTCTGACGATTTTCCGAGCCCTGAAAAT AACCTATTGTTGTGGGTGGCCTCATATCTTTCTGTTGAAACATCGCATCA ACTCGTCACCATCGTGAACGATGATGGGCCACAACCCGTGTTGTCTTATG CAGACTTTGATTGGTCAAACCCGGAAGCAAGATTTAATGCATCTGTTGTA CGAAGAAAGCGGAGAAGACTAGAAAGAGAGTGTGATCTCGATGACGGTCA ACAAGATGCAATTGACCTTAGTCTCCAGATGCACATTGGAGACATGTCCT CCATATTTTCTGCACAGCCTGGTGCTAGCGAAGACTTGTTCAAGAATAGC CATATGAGTTCTCCAATGATATTTGCAGCAAACGGATCAAATGAAGTTAA ACAATCTCCGACGTTGCTCAACAACACGCCAAGCGCTGGAGGTCGATCTC AGGAAGACTCCTCCAAAAGGTTAACTCCTGATATAATGAATGTAAGCCAG CCAGAGGCTCCAACCTTGAAGAGTAGTGAAAATGGGTCCAGTACAAAtgc ggctgctacagctgctgctgccgcCTCACCGGCGTGA back to top
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