Gcaud1643.t1 (polypeptide) Gracilaria caudata M_176_S67 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGcaud1643.t1
Unique NameGcaud1643.t1
Typepolypeptide
OrganismGracilaria caudata M_176_S67 male (Gracilaria caudata M_176_S67 male)
Sequence length396
Homology
BLAST of Gcaud1643.t1 vs. uniprot
Match: A0A2V3IUT5_9FLOR (Chromosomal serine/threonine-protein kinase JIL-1 n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IUT5_9FLOR)

HSP 1 Score: 659 bits (1701), Expect = 7.500e-232
Identity = 337/402 (83.83%), Postives = 364/402 (90.55%), Query Frame = 0
Query:    1 MSRGPRDDWRRASGSLNKRSRRAAIFDAAARSADSFSSVAGRWSLSRRRRSRAASDHKRLRKRRSFHSSQRNIDDGTPSLHTNTPFVIATTADEHRANQN------AHLSPRYASFGSEGVSATSLRDADSRYAHPALRPTFDALRLLRKIPEVMAGWVQIKCPTGPGRLRWSTWTMFWAELRGGYILLTRDHNSLAAVSDSTCQNPVDYIFGATHCQISRVISRSGAVRLRLTRTSSRRRNDSATATSSGIVDDDDLNFRPIESDARLSERSGKSTSSEKRTFGSTMKRIMSGKMKSKPSTPDVSVSEEISAELIIKIQSTPEADKWEWALRNTTQAYESKRLGDFQLIDALGAGAFGRVYLVYDAVKGEYLALKVLEKSLVFRDRLHFESAINERLTLEL 396
            MSRGPRDDWRRASGSLNKRSRRAA FDAAARSADSFSSVAGRWSLSRRRRSR+ASDHKRLRKRRSFH+SQR  DDGTPSLHTNTPFVI TTAD+HR+NQN      A LS RY SF SEG SA SLRD D+RY HPALRPTFDALRLLRKIPEVMAGWVQ+KCPTGPGRLRWSTWTMFWAELRGGYILLTR+HNS A+VSDSTCQNPVDYIFGATHC I+R++SRSGAVRLRL+R SSRRRNDSATATSSGIVDDDD+  R ++SD R SERS KS+S +KR+FGSTMKRIMSGK+KSKP  PD  + EEI+AEL++KI S PEADKWEWALRNTTQAY SKRLGDFQLIDALGAGAFGRVYLV+D VK EYLALKVL+KSLVF+DRLHFESA+NERLTLEL
Sbjct:    1 MSRGPRDDWRRASGSLNKRSRRAAFFDAAARSADSFSSVAGRWSLSRRRRSRSASDHKRLRKRRSFHASQRTYDDGTPSLHTNTPFVIPTTADDHRSNQNQSQSQNAPLSSRYTSFASEGHSAASLRDTDARYTHPALRPTFDALRLLRKIPEVMAGWVQLKCPTGPGRLRWSTWTMFWAELRGGYILLTREHNSFASVSDSTCQNPVDYIFGATHCHITRLVSRSGAVRLRLSRLSSRRRNDSATATSSGIVDDDDIQMRTVDSDPRFSERSAKSSSFDKRSFGSTMKRIMSGKIKSKPPAPDTPIGEEITAELVLKIPSAPEADKWEWALRNTTQAYASKRLGDFQLIDALGAGAFGRVYLVHDTVKREYLALKVLDKSLVFKDRLHFESAVNERLTLEL 402          
BLAST of Gcaud1643.t1 vs. uniprot
Match: A0A2V3J5M0_9FLOR (Protein kinase C iota type n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J5M0_9FLOR)

HSP 1 Score: 74.3 bits (181), Expect = 1.280e-10
Identity = 40/87 (45.98%), Postives = 56/87 (64.37%), Query Frame = 0
Query:  309 LIIKIQSTPEADKWEWALRNTTQAYESKRLGDFQLIDALGAGAFGRVYLVYDAVKGEYLALKVLEKSLVFRDRLHFESAINERLTLE 395
            L+++I +  EA +W  AL+  T  Y + RL DF  I A+G GA G+V+LV D      LALKV++KS V+R+ L F+  +NERL LE
Sbjct:  221 LVMRIGTPQEAQQWVVALQTHTVQYTATRLADFDWIIAIGKGASGKVFLVRDNRTNARLALKVVDKSRVYRNNLTFQHIVNERLVLE 307          
BLAST of Gcaud1643.t1 vs. uniprot
Match: R7QAL8_CHOCR (Uncharacterized protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QAL8_CHOCR)

HSP 1 Score: 73.9 bits (180), Expect = 1.700e-10
Identity = 38/88 (43.18%), Postives = 57/88 (64.77%), Query Frame = 0
Query:  309 LIIKIQSTPEADKWEWALRNTTQAYESKRLGDFQLIDALGAGAFGRVYLVYDAVKGEYLALKVLEKSLVFRDRLHFESAINERLTLEL 396
            +++++ +  +A +W  A++  T  Y + RL DF  I A+G GA G+V+LV D      LALKV++KS VFR +L F+  INERL LE+
Sbjct:  206 VVLRMATAQDAQQWAIAVQTQTFQYTTIRLADFDWITAIGKGASGKVFLVRDNRTNARLALKVIDKSRVFRSQLTFQHVINERLVLEM 293          
BLAST of Gcaud1643.t1 vs. uniprot
Match: A0A5J4Z0I1_PORPP (RAC-beta serine/threonine-protein kinase n=1 Tax=Porphyridium purpureum TaxID=35688 RepID=A0A5J4Z0I1_PORPP)

HSP 1 Score: 62.0 bits (149), Expect = 9.810e-7
Identity = 34/77 (44.16%), Postives = 51/77 (66.23%), Query Frame = 0
Query:  320 DKWEWALRNTTQAYESKRLGDFQLIDALGAGAFGRVYLVYDAVKGEYLALKVLEKSLVFRDRLHFESAINERLTLEL 396
            D+W   L N++++  +  L DF++  ALG GA G+V+LV D +  E LALKV+EKS+V+     +  A++ERL LEL
Sbjct:  159 DRWMRVL-NSSKSQRTVGLSDFEIQAALGKGASGKVFLVRDKLTNEELALKVIEKSVVYETNDAYRHALDERLVLEL 234          
The following BLAST results are available for this feature:
BLAST of Gcaud1643.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 4
Match NameE-valueIdentityDescription
A0A2V3IUT5_9FLOR7.500e-23283.83Chromosomal serine/threonine-protein kinase JIL-1 ... [more]
A0A2V3J5M0_9FLOR1.280e-1045.98Protein kinase C iota type n=1 Tax=Gracilariopsis ... [more]
R7QAL8_CHOCR1.700e-1043.18Uncharacterized protein n=1 Tax=Chondrus crispus T... [more]
A0A5J4Z0I1_PORPP9.810e-744.16RAC-beta serine/threonine-protein kinase n=1 Tax=P... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D3.30.200.20Phosphorylase Kinase; domain 1coord: 324..396
e-value: 9.7E-11
score: 43.0
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 258..272
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 54..82
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 258..279
IPR017441Protein kinase, ATP binding sitePROSITEPS00107PROTEIN_KINASE_ATPcoord: 347..370
IPR000719Protein kinase domainPROSITEPS50011PROTEIN_KINASE_DOMcoord: 341..396
score: 10.336914
IPR011009Protein kinase-like domain superfamilySUPERFAMILY56112Protein kinase-like (PK-like)coord: 336..393

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NODE_34_length_72082_cov_4.421108contigNODE_34_length_72082_cov_4.421108:70..1257 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria caudata M_176_S67 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gcaud1643.t1Gcaud1643.t1Gracilaria caudata M_176_S67 malemRNANODE_34_length_72082_cov_4.421108 70..1257 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gcaud1643.t1 ID=Gcaud1643.t1|Name=Gcaud1643.t1|organism=Gracilaria caudata M_176_S67 male|type=polypeptide|length=396bp
MSRGPRDDWRRASGSLNKRSRRAAIFDAAARSADSFSSVAGRWSLSRRRR
SRAASDHKRLRKRRSFHSSQRNIDDGTPSLHTNTPFVIATTADEHRANQN
AHLSPRYASFGSEGVSATSLRDADSRYAHPALRPTFDALRLLRKIPEVMA
GWVQIKCPTGPGRLRWSTWTMFWAELRGGYILLTRDHNSLAAVSDSTCQN
PVDYIFGATHCQISRVISRSGAVRLRLTRTSSRRRNDSATATSSGIVDDD
DLNFRPIESDARLSERSGKSTSSEKRTFGSTMKRIMSGKMKSKPSTPDVS
VSEEISAELIIKIQSTPEADKWEWALRNTTQAYESKRLGDFQLIDALGAG
AFGRVYLVYDAVKGEYLALKVLEKSLVFRDRLHFESAINERLTLEL
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR017441Protein_kinase_ATP_BS
IPR000719Prot_kinase_dom
IPR011009Kinase-like_dom_sf