Gcaud8614.t1 (polypeptide) Gracilaria caudata M_176_S67 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGcaud8614.t1
Unique NameGcaud8614.t1
Typepolypeptide
OrganismGracilaria caudata M_176_S67 male (Gracilaria caudata M_176_S67 male)
Sequence length360
Homology
BLAST of Gcaud8614.t1 vs. uniprot
Match: A0A2V3IUZ7_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IUZ7_9FLOR)

HSP 1 Score: 238 bits (607), Expect = 1.100e-69
Identity = 120/197 (60.91%), Postives = 153/197 (77.66%), Query Frame = 0
Query:    1 MLAVKDGTVDASADVEDNLYYWKDQLYCTVPEYQVTSIEDKNHIFKCLRAAHGVGLIESPEVYVQAIHIMDSVRKEVLVLKKAGIKLLERVLALEANLEDLRAAFQRYRERQLYSNLVGIAVQLIPIAGGAMAKIILAGAEIAEGLAAGEVVEYVLSFAAGLLEDENFSKLPPSRQTEVKTILHEYGYTTDDIRLLL 197
            +LAVKDG +D SADVE  +Y+W+DQLYCTV ++QV S+EDKN +F+CLR AH + LI+SP+ Y+Q IH+M SVR+EV VLK+A + LL RVL+LE ++E LR A +RYR+RQLYSNLVGIA+QLIP+AGGAMAK I+ GAEI   L A +V EY L  A  +L DENF+ LP SRQ E+  +  E+GYT +DI LLL
Sbjct:  408 VLAVKDGALDPSADVEGQVYFWRDQLYCTVIDHQVLSVEDKNRLFRCLREAHDLRLIDSPDAYIQGIHVMQSVREEVFVLKRACLFLLMRVLSLETSIESLRTALKRYRKRQLYSNLVGIALQLIPVAGGAMAKAIMTGAEIVGDLNACDVAEYALESAVTILSDENFTTLPRSRQEELTGLFEEFGYTMNDIHLLL 604          
BLAST of Gcaud8614.t1 vs. uniprot
Match: A0A2V3J4V3_9FLOR (Transcription initiation factor TFIID subunit 5 n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J4V3_9FLOR)

HSP 1 Score: 170 bits (430), Expect = 2.700e-43
Identity = 105/260 (40.38%), Postives = 159/260 (61.15%), Query Frame = 0
Query:    1 MLAVKDGTVDASADVEDNLYYWKDQLYCTVPEYQVTSIEDKNHIFKCLRAAHGVGLIESPEVYVQAIHIMDSVRKEVLVLKKAGIKLLERVLALEANLEDLRAAFQRYRERQLYSNLVGIAVQLIPIAGGAMAKIILAGAEIAEGLAAGEVVEY--------VLSFAAGLLEDENFSKLPPSRQTEVKTILHEYGYTTDDIR-LLLHSC-----VNIGDSDA---EIALGARATE-----DGRPAHCAQIQVAARDERES 238
            ++AV +GTV  S      LY+W +QLY TV  +   S  D++ +  CL+ +H + +++SP+  V  + +M+SVR +V  LK+A I +LERVL +E  LEDLR AF  YR  Q Y+ ++GIA+QLIPIAGGA+A ++ AGA+I  GL+  ++V+Y        V   A+ LL  +  + L P R+ E++ + HE+G+TT+++R LLL +C     +N GD+DA   E++ GA  TE     DGR      I V  RDE ++
Sbjct:  406 VMAVTEGTVRRSPHFHIKLYWWMEQLYATVAMFTDLSRADRDDVKTCLKNSHSLHVLQSPDAVVLGVEMMNSVRNDVSALKRACIMILERVLVVEGRLEDLRGAFVAYRRCQQYAKVIGIALQLIPIAGGAVAGVLSAGADIVSGLSVKDLVDYAFQGGGPLVTEVASRLLTPQALAALDPERRYELERLFHEFGFTTEEVRKLLLEACEDRGDINGGDNDANGHEMSTGAGLTETLSGVDGRSN--VGIDVELRDETDT 663          
BLAST of Gcaud8614.t1 vs. uniprot
Match: A0A2V3J6P9_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J6P9_9FLOR)

HSP 1 Score: 134 bits (338), Expect = 2.400e-34
Identity = 80/184 (43.48%), Postives = 119/184 (64.67%), Query Frame = 0
Query:   70 MDSVRKEVLVLKKAGIKLLERVLALEANLEDLRAAFQRYRERQLYSNLVGIAVQLIPIAGGAMAKIILAGAEIAEGLAAGEVVEYVLSFAAGLLEDENFSKLPPSRQTEVKTILHEYGYTTDDIRLLLHSCVNIGD--SDAEIALGARATEDGRPAHCAQIQVAARDERESCNSESEGCEADNI 251
            M S+R+EV VLK+A I LL+RVL +EA +EDLR+AF + R RQ +SN + IA+QLIPIAGGA+   +L G EIAEGL AG+V +   S A  LL +EN S++ P ++ E++++ H+YGYT +D+++LL S   + +  S + +   +R +E G   +  Q Q     E E  N  SE  + +N+
Sbjct:    1 MVSMREEVSVLKRARIMLLQRVLVVEAQVEDLRSAFLQNRRRQAFSNSLSIAIQLIPIAGGAVGNALLVGIEIAEGLPAGDVFDLAFSTAEVLLSEENLSRMDPRKRREMESVFHDYGYTIEDVQVLLRSTREVENEFSSSRLLEYSRDSETGGAEYQPQQQ-----ENEEVNEASELDDGENV 179          
The following BLAST results are available for this feature:
BLAST of Gcaud8614.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
A0A2V3IUZ7_9FLOR1.100e-6960.91Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
A0A2V3J4V3_9FLOR2.700e-4340.38Transcription initiation factor TFIID subunit 5 n=... [more]
A0A2V3J6P9_9FLOR2.400e-3443.48Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 91..111

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NODE_329_length_29763_cov_4.543981contigNODE_329_length_29763_cov_4.543981:8800..9879 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria caudata M_176_S67 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gcaud8614.t1Gcaud8614.t1Gracilaria caudata M_176_S67 malemRNANODE_329_length_29763_cov_4.543981 8800..9879 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gcaud8614.t1 ID=Gcaud8614.t1|Name=Gcaud8614.t1|organism=Gracilaria caudata M_176_S67 male|type=polypeptide|length=360bp
MLAVKDGTVDASADVEDNLYYWKDQLYCTVPEYQVTSIEDKNHIFKCLRA
AHGVGLIESPEVYVQAIHIMDSVRKEVLVLKKAGIKLLERVLALEANLED
LRAAFQRYRERQLYSNLVGIAVQLIPIAGGAMAKIILAGAEIAEGLAAGE
VVEYVLSFAAGLLEDENFSKLPPSRQTEVKTILHEYGYTTDDIRLLLHSC
VNIGDSDAEIALGARATEDGRPAHCAQIQVAARDERESCNSESEGCEADN
IEESGQPVHCKPSLTTNDGFSETWTRHILGCRNTEEAKRNGMAACLVEFL
ENEDITISALKARSSAELNTLKDAAILAVQQKLGIQMRIGQKLRLREFLD
DFCKEGVVE*
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