Gcaud7315.t1 (polypeptide) Gracilaria caudata M_176_S67 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGcaud7315.t1
Unique NameGcaud7315.t1
Typepolypeptide
OrganismGracilaria caudata M_176_S67 male (Gracilaria caudata M_176_S67 male)
Sequence length357
Homology
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BLAST of Gcaud7315.t1 vs. uniprot
Match: A0A2V3J520_9FLOR (DUF4042 domain-containing protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J520_9FLOR)

HSP 1 Score: 211 bits (536), Expect = 1.100e-57
Identity = 122/353 (34.56%), Postives = 196/353 (55.52%), Query Frame = 0 
Query:    7 VLAACIRAIAHVHLDLEPNLAEDSLRLIYNIMEHSGSSGTHVTKFCMSSMTRVMETFTKHSSLQITDDILRILTKGNNFAIEGLRNSFRLSAGSAIKSSSDRANEEANKTAAVGLVACHIGVRKSLDEDGCSSQEFPVQMSSDIQLLRQLLRNEGETVNLRSCICRALGRLVTLHVSGLGE----YVDGILRDMVAIMSPKSNVRLQICSARSVIQIMKASNIEDSRFEVLQNSITCFLAIKSQLQRGGLMPKLRNQVAALLNTIGELVLQVFHRASEGLLNEVKSKWDNRWEPNILIACVSSHLSLPKYVKYESDCDLEKVMESTPVAERDVMRTILQL---TNSLRRPVEE 352
            V AA IRA+   H +++ +    + + ++N M  SG  G+ + +FCMSSMT +++    +       ++L +L     FA+E L+     +  +  KS+SDRAN E+NKTAA+GL+ C       L E     + F  +  +  +LL +L++N+ ETVNLR C C+ALG ++++   G  +    + D IL  ++  +SPK+N+R+QIC+A S++ +M  S+ + +R  V++N I C LA+ S +Q+G      + Q   L NT+GELV + F R     L  + S W+  W+  +LI+CVS++LS+P Y    S       ME++P A R VM  I +L    N  R   EE
Sbjct:  539 VRAAAIRALVFAHPEVQQDFPLTTFKFLFNTMRSSGKDGSLIARFCMSSMTILVDILLPNRDRWRNGELLTVLEDATLFAVETLQCLRLTNTSTESKSASDRANTESNKTAAIGLIVCLFRTLVMLGESEARMESFGKEEMNLFRLLCELVQNDSETVNLRCCCCKALGSIISVDEGGPRKTPLKWFDCILDVIIDAVSPKNNLRIQICAATSLLSVMAQSSADHARIRVIRNCIKCHLAVVSDVQKGATAKNTKTQQRILQNTLGELVFETFLRTPNDSLATLASNWEKEWDSKVLISCVSTYLSIPSYAMGASSESEFLFMETSPDAMRVVMEKIFRLRGVVNQARAVSEE 891
The following BLAST results are available for this feature:
BLAST of Gcaud7315.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A2V3J520_9FLOR1.100e-5734.56DUF4042 domain-containing protein n=1 Tax=Gracilar... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR016024Armadillo-type foldSUPERFAMILY48371ARM repeatcoord: 4..298

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NODE_3204_length_3835_cov_5.416400contigNODE_3204_length_3835_cov_5.416400:2741..3811 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria caudata M_176_S67 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gcaud7315.t1Gcaud7315.t1Gracilaria caudata M_176_S67 malemRNANODE_3204_length_3835_cov_5.416400 2741..3811 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gcaud7315.t1 ID=Gcaud7315.t1|Name=Gcaud7315.t1|organism=Gracilaria caudata M_176_S67 male|type=polypeptide|length=357bp
MLEDAQVLAACIRAIAHVHLDLEPNLAEDSLRLIYNIMEHSGSSGTHVTK
FCMSSMTRVMETFTKHSSLQITDDILRILTKGNNFAIEGLRNSFRLSAGS
AIKSSSDRANEEANKTAAVGLVACHIGVRKSLDEDGCSSQEFPVQMSSDI
QLLRQLLRNEGETVNLRSCICRALGRLVTLHVSGLGEYVDGILRDMVAIM
SPKSNVRLQICSARSVIQIMKASNIEDSRFEVLQNSITCFLAIKSQLQRG
GLMPKLRNQVAALLNTIGELVLQVFHRASEGLLNEVKSKWDNRWEPNILI
ACVSSHLSLPKYVKYESDCDLEKVMESTPVAERDVMRTILQLTNSLRRPV
EEGASG*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR016024ARM-type_fold