Gcaud2530.t1 (polypeptide) Gracilaria caudata M_176_S67 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGcaud2530.t1
Unique NameGcaud2530.t1
Typepolypeptide
OrganismGracilaria caudata M_176_S67 male (Gracilaria caudata M_176_S67 male)
Sequence length553
Homology
BLAST of Gcaud2530.t1 vs. uniprot
Match: A0A2V3J0W6_9FLOR (Protein DAMAGED DNA-BINDING 2 n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J0W6_9FLOR)

HSP 1 Score: 731 bits (1886), Expect = 3.740e-260
Identity = 344/503 (68.39%), Postives = 410/503 (81.51%), Query Frame = 0
Query:    4 RIPAGDERTGLLLRKRYQSVGCYYCRDNNLTHRFDHIHTTCPLRPCFLCKKSGHTSLDCPYRTRPNAHTQTLRRILRNRERLAHLHHFTRERETNSSLDRLNVALPYVRNRQFDCQLAFFGLRAHAKRVTALEWHPSGRYLLSGDKAGALRVLALTNSLRDAALDPTVQPLFDAEPSQVHYCNINNIVFENN-PDICYTSSSDGKVSALRIPLLRGVPTRPTEDPVHAYDTIANLNPNGWQGSVSQFKMVYGMSFDRKRNCLYIGASDGSIRRFDPRQPADDSADIKSKFHASKVTCIDVNPINSDLVVTASNDAHVCLWDARKFVETHSLGWYRHDRVVSSAYFSPNTGSKLLTTALDNKLRVWQDLHSFQGSVNDHKNGSPLEIVHSHDFHRHLTAFRAVWDPKDWTDDLFMCGRFLGDAYLDGEEEDT-ANILHPVDLFSVKAGTVVHSLMDSGVPLICTSNKFSPTSDVIATAASGHLIFWSPSLKDKNDEDGVERGKK 504
            RIPAGDERT +LLRKRYQSVGCYYCR        DH+HT CP RPCFLCK+ GHTSL CP+RTRPNAH   +  ILR+R+RLA LH+FTRERE + SL + N++LPYV NRQF C+LA   LRAH KRVTA+EWHPSG +LLSGDK+G LR+L L ++LRD A+DP   P +  +P+QVHYCNINNIVF+ N P +CYT+SSDG + AL IPLL    T  +E+ + A DT+ +LNPNGWQGSVS FKM+YGM+FD +RN LY GA+DGSIRR DPR+P      I SKFHA KVTCIDVNP+N+DLVVTASNDA VCLWDARKFVETH LG Y+HDRVVSSAYFSPNTG+KLLTT+LDNK+RVW  +HSFQG+VND+++ +PLEIVHSHDFHRHLT FRAVWDPKDW DDLFMCGRFLGDAY D  +E++ A++LHP+D+FS  AGTVVHSL+DS V LICTSN+FSPT+DV+ATAAS +LI WSP+ +D  D D +E G++
Sbjct:    2 RIPAGDERTRILLRKRYQSVGCYYCRTK-FAVTSDHVHTNCPKRPCFLCKQPGHTSLQCPFRTRPNAHASAVAAILRSRQRLARLHYFTREREIDPSLHKFNLSLPYVPNRQFHCELATIALRAHPKRVTAVEWHPSGAFLLSGDKSGVLRLLPLQHALRDGAIDPQNVPSYRTDPAQVHYCNINNIVFDTNRPHVCYTTSSDGTLCALTIPLLNSRSTHTSENILQARDTLLDLNPNGWQGSVSLFKMLYGMAFDSRRNALYAGATDGSIRRIDPREPPHSPPQISSKFHARKVTCIDVNPLNTDLVVTASNDATVCLWDARKFVETHPLGSYQHDRVVSSAYFSPNTGAKLLTTSLDNKIRVWDSVHSFQGNVNDYQDAAPLEIVHSHDFHRHLTPFRAVWDPKDWKDDLFMCGRFLGDAYYDEHDENSEAHVLHPIDMFSASAGTVVHSLIDSSVSLICTSNRFSPTADVVATAASVNLILWSPATED--DSDDMEHGRR 501          
BLAST of Gcaud2530.t1 vs. uniprot
Match: R7QBI4_CHOCR (Uncharacterized protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QBI4_CHOCR)

HSP 1 Score: 418 bits (1074), Expect = 2.100e-137
Identity = 227/491 (46.23%), Postives = 290/491 (59.06%), Query Frame = 0
Query:    3 TRIPA-GDERTGLLLRKRYQSVGCYYCRDNNLTHRFDHIHTTCPLRPCFLCKKSGHTSLDCPYRTRPNAHTQTLRRILRNRERLAHLHHFTRERETNSSLDRLNVALPYVRNRQFDCQLAFFGLRAHAKRVTALEWHPSGRYLLSGDKAGALRVLALTNSLRDAAL-DPTVQPLFDAEPSQ--VHYCNINNIVFENNPDICYTSSSDGKVSALRIPLL-RGVPTRPTEDPVHAYDTIANLNPNGWQGSVSQFKMVYGMSFDRKRNCLYIGASDGSIRRFDPRQPADDSADIKSKFHASKVTCIDVNPINSDLVVTASNDAHVCLWDARKFVETHSLGWYRHDRVVSSAYFSPNTGSKLLTTALDNKLRVWQDLHSFQGSVNDHKNGSPLEIVHSHDFHRHLTAFRAVWDPKDWTDDLFMCGRFLGDAYLDGEEEDTANILHPVDLFSVKAGTVVHSLMDSGVPLICTSNKFSPTSDVIATAASGHLIFWSP 488
            T +PA GD RT  +L+KRY SVGCY C+ +       H H  CP RP               +R +P AH      + R R        F + RE  S+     VAL   R+RQFD  +A    RAH KR+TA EWHP+G + ++GDKAG +RV A+     D  L DP    L  A PS   VH+CN+    F    D  Y+ +SDG V  L + L          E+ V   D + N+NP GW G    FKM Y ++  R  N LYIG S G + R DPR+  +       + H SKVTC+DVN    +LV TASND  VC+WDAR+      LGW+ H RVVSSAYFSPNTGSKLL+T++DN++R+W D+H F G VN   +  P+E++HSHDFHRHL AFRAVWDPKDW DDLFMCGR +GDAY+D  E     +LHPVD+F+  +G VVHSL+D  V LICT+N+FSP +D + T ASG ++ W+P
Sbjct:    5 TPLPAAGDARTTYILQKRYNSVGCYVCKSHT------HTHHACPTRPXXXXXXXXXXXXXXXFRLKPGAH------LSRRRGPTTSAAAFLKSREVGSARSPATVAL---RDRQFDASVARCVRRAHQKRITAAEWHPAGAHFVTGDKAGIVRVWAVG----DVRLGDPLGHALPAAAPSAAYVHHCNVTAFAFGPAGDEAYSCASDGVVHRLALELAGSSAQQERLEEGVSGRDEVLNMNPEGWHGQ-HNFKMGYSLA--RAGNALYIGDSVGHLWRVDPREGGEKGH--CWRLHKSKVTCVDVNVAGGNLVATASNDRRVCVWDARRMERGAELGWFEHGRVVSSAYFSPNTGSKLLSTSMDNRIRLWGDVHGFVGDVNARTDVEPVEMIHSHDFHRHLNAFRAVWDPKDWRDDLFMCGRMMGDAYVD--EGGREVLLHPVDMFAASSGQVVHSLIDPAVTLICTTNRFSPVADGVLTVASGDVVLWTP 469          
BLAST of Gcaud2530.t1 vs. uniprot
Match: A0A1U8MCX5_GOSHI (protein DAMAGED DNA-BINDING 2-like n=18 Tax=Gossypium TaxID=3633 RepID=A0A1U8MCX5_GOSHI)

HSP 1 Score: 255 bits (651), Expect = 2.340e-74
Identity = 162/484 (33.47%), Postives = 233/484 (48.14%), Query Frame = 0
Query:   44 CPLRPCFLCKKSGHTSLDCPYRTR------PNAHTQTLRRILRNRERLAHLHHFTRERETNSSLDRLNVALPYVRNRQFDCQLAFFGLRAHAKRVTALEWHPSGRY-LLSGDKAGALRVLALTNSLRDAALDPTVQPLFDAEPSQVHYCNINNIVFEN-NPDICYTSSSDGKVSALRIPLLRGVPTRPTEDPVHAYDTIANLNPNGWQGSVSQFKMVYGMSFDRKRNCLYIGASDGSIRRFDPRQPADDSADIKSKFHASKVTCIDVNPINSDLVVTASNDAHVCLWDARKFVETHSLGWYRHDRVVSSAYFSPNTGSKLLTTALDNKLRVWQDLHSFQGSVNDHKNGSPLEIVHSHDFHRHLTAFRAVWDPKDWTDDLFMCGRFLGDAYLDGEEEDTANILHPVDLFSVKAGTVVHSLMDSGVPLICTSNKFSPTSDVIATAASGHLIFWSPSLKDKNDEDGVER----GKKYRRSGKRDADD 515
            CP++PCFLCK  GHT++ CP+R        P  H  T   +            F  ER+    +  +  A  YV   Q DC +    +R H++RVT LE+HP+  + LLSGDK G L +            + TV          +H C +NN+ F   N  + Y +SSDG +S              T+       T+ NLNP+GWQG  S ++M+YGM  + +R  + +  + G +   D R  +     I      SKV  +  NP   DL+++  ND    LWD R+      L    H RVV+SAYFSP +G+K+LTT+ DN+LR+W        S+    +    EIVHSHDF+RHLT FRA WDPKD ++ L + GR++ + Y           LHP+D      G +V  +MD  +  I   NK  P  DV+A+ +S  L  W P   D +++    +    G   ++ GKR  DD
Sbjct:   85 CPMKPCFLCKMPGHTTMTCPHRVATEHGVVPAPHVNTQNPV-----------EFAFERQLKPRITPIKPA--YVIPDQVDCAV----IRYHSRRVTCLEFHPTNNHILLSGDKKGQLGIWDFAK-----VHEKTVY-------GNIHSCILNNMRFSPANDGMIYAASSDGTISC-------------TDLETGISSTLMNLNPDGWQGPGS-WRMLYGMDINLERGVVLVADNFGFLYLVDSRSNSQTGKAIMIHKKGSKVVGLHCNPFQPDLLLSCGNDHFARLWDMRRLEAGSVLANLEHRRVVNSAYFSPFSGTKILTTSQDNRLRIWD-------SIFRDLDSPSREIVHSHDFNRHLTPFRAEWDPKDPSESLVVIGRYISENY-------NGTALHPIDFIDTNTGQLVAEVMDPNITTITPVNKLHPRDDVLASGSSRSLFIWRPKKFDVSEQSDTRKIIVFGGDEKKQGKRSKDD 511          
BLAST of Gcaud2530.t1 vs. uniprot
Match: A0A061GWF2_THECC (Damaged DNA binding 2 n=3 Tax=Byttnerioideae TaxID=214909 RepID=A0A061GWF2_THECC)

HSP 1 Score: 254 bits (649), Expect = 6.150e-74
Identity = 168/483 (34.78%), Postives = 236/483 (48.86%), Query Frame = 0
Query:   44 CPLRPCFLCKKSGHTSLDCPYRTR------PNAHTQTLRRILRNRERLAHLHHFTRERETNSSLDRLNVALPYVRNRQFDCQLAFFGLRAHAKRVTALEWHPSGRY-LLSGDKAGALRVLALTNSLRDAALDPTVQPLFDAEPSQVHYCNINNIVFEN-NPDICYTSSSDGKVSALRIPLLRGVPTRPTEDPVHAYDTIANLNPNGWQGSVSQFKMVYGMSFDRKRNCLYIGASDGSIRRFDPRQPADDSADIKSKFHASKVTCIDVNPINSDLVVTASNDAHVCLWDARKFVETHSLGWYRHDRVVSSAYFSPNTGSKLLTTALDNKLRVWQDLHSFQGSVNDHKNGSPLEIVHSHDFHRHLTAFRAVWDPKDWTDDLFMCGRFLGDAYLDGEEEDTANILHPVDLFSVKAGTVVHSLMDSGVPLICTSNKFSPTSDVIATAASGHLIFWSPSLKDKNDE------------DGVERGKKYR 506
            CP++PCFLCK  GHT++ CP+R        P  H  T   +            F  ER+    +  +  A  YV   Q +C      +R H++RVT+LE+HP+  + LLSGDK G L V            + TV          +H C +NN+ F   N    Y +SSDG VS     L  G+ T           ++ NLNP+GWQG  S ++M+YGM  + ++  + +  + G +   D R  +     I      SKV  +  NP+  DL+++  ND    LWD R+     +L    H RVV+SAYFSP +GSK+LTT+ DN+LR+W        S+  + +    EIVHSHDF+RHLT FRA WDPKD ++ L + GR++ + Y           LHP+D   +  G +V  +MD  +  I   NK  P  DV+AT +S  L  W P  K    E            DG +RGKKYR
Sbjct:   92 CPMKPCFLCKMPGHTTMTCPHRVATEHGVIPAPHKNTQNPV-----------EFIFERQLRPGIASIKPA--YVIPDQVNCA----AIRYHSRRVTSLEFHPTYNHILLSGDKKGQLGVWDFAK-----VHEKTVY-------GNIHSCILNNMRFSPANDGTIYAASSDGTVSCT--DLETGIST-----------SLMNLNPDGWQGPGS-WRMLYGMDINSEKGAVLVADNFGFLYLVDTRSNSRIGKAIMIHKKRSKVVGLHCNPVQPDLLLSCGNDHFARLWDMRRLEAGSALYNLEHRRVVNSAYFSPLSGSKILTTSQDNRLRIWD-------SIFGNLDSPSREIVHSHDFNRHLTPFRAEWDPKDPSESLAVIGRYISENY-------NGTALHPIDFIDINTGHLVAEVMDPNITTISPVNKLHPRDDVLATGSSRSLFIWRPKEKLGVAEPLDARKIIVFGGDGKKRGKKYR 517          
BLAST of Gcaud2530.t1 vs. uniprot
Match: A0A6P5ZJR8_DURZI (protein DAMAGED DNA-BINDING 2 n=1 Tax=Durio zibethinus TaxID=66656 RepID=A0A6P5ZJR8_DURZI)

HSP 1 Score: 249 bits (637), Expect = 3.490e-72
Identity = 156/455 (34.29%), Postives = 228/455 (50.11%), Query Frame = 0
Query:   44 CPLRPCFLCKKSGHTSLDCPYRTRPNAHTQTLRRILRNRERLAHLHHFTRERETNSSLDRLNVALPYVRNRQFDCQLAFFGLRAHAKRVTALEWHPSGRY-LLSGDKAGALRVLALTNSLRDAALDPTVQPLFDAEPSQVHYCNINNIVFEN-NPDICYTSSSDGKVSALRIPLLRGVPTRPTEDPVHAYDTIANLNPNGWQGSVSQFKMVYGMSFDRKRNCLYIGASDGSIRRFDPRQPADDSADIKSKFHASKVTCIDVNPINSDLVVTASNDAHVCLWDARKFVETHSLGWYRHDRVVSSAYFSPNTGSKLLTTALDNKLRVWQDLHSFQGSVNDHKNGSPLEIVHSHDFHRHLTAFRAVWDPKDWTDDLFMCGRFLGDAYLDGEEEDTANILHPVDLFSVKAGTVVHSLMDSGVPLICTSNKFSPTSDVIATAASGHLIFWSPSLKDKNDE 496
            CP++PCFLCK  GHT++ CP+R      T     I    + + +   F  ER+    +   ++  PYV   Q +C      +R H++RVT LE+HP+  + LLSGDK G L V            + TV          +H C +NN+ F   N    Y +SSDG +S              T+       ++ NLNP+GWQG  S ++M+YGM  + +++ + +  + G +   D R  +     I      SKV  +  NP   DL+++  ND    LWD R+     SL    H RVV+SAYFSP +G K+LTT+ DN+LR+W        S+  + +    EIVHSHDF+RHLT FRA WDPKD ++ L + GR++ + Y           LHP+D   +  G +V  +MD  +  I   NK  P  DV+A+ +S  L  W P  K+K D+
Sbjct:   91 CPMKPCFLCKMPGHTTMTCPHRV-----TTEHGVIPAPHKNIQNPVEFIFERQLRPGIT--SIKPPYVIPDQVNCA----AIRYHSRRVTCLEFHPTNNHILLSGDKKGQLGVWDFAK-----VHEKTVY-------GNIHSCILNNMRFSPANDGTIYAASSDGTISC-------------TDLETGISSSLINLNPDGWQGPAS-WRMLYGMDINSEKSVVLVADNFGFLYLVDARSNSQTGKAIMIHKKGSKVVGLHCNPFQPDLLLSCGNDHFARLWDMRRLEAGSSLCNLEHRRVVNSAYFSPLSGCKILTTSQDNRLRIWD-------SIFGNLDSPSREIVHSHDFNRHLTPFRAEWDPKDPSESLAVIGRYISENY-------NGTALHPIDFIDINTGQLVAEVMDPNITTITPVNKLHPRDDVLASGSSRSLFIWRP--KEKYDD 492          
BLAST of Gcaud2530.t1 vs. uniprot
Match: A0A5J9UE53_9POAL (DNA damage-binding protein 2 n=1 Tax=Eragrostis curvula TaxID=38414 RepID=A0A5J9UE53_9POAL)

HSP 1 Score: 250 bits (638), Expect = 5.600e-72
Identity = 156/480 (32.50%), Postives = 233/480 (48.54%), Query Frame = 0
Query:   40 IHTTCPLRPCFLCKKSGHTSLDCPYRTRPNAHTQTLRRILRNRERLAHLHHFTRERETNSSLD---------RLNVALP-YVRNRQFDCQLAFFGLRAHAKRVTALEWHPS-GRYLLSGDKAGALRVLALTNSLRDAALDPTVQPLFDAEPSQVHYCNINNIVFEN-NPDICYTSSSDGKVSALRIPLLRGVPTRPTEDPVHAYDTIANLNPNGWQGSVSQFKMVYGMSFDRKRNCLYIGASDGSIRRFDPRQPADDSADIKSKFHASKVTCIDVNPINSDLVVTASNDAHVCLWDARKFVETHSLGWYRHDRVVSSAYFSPNTGSKLLTTALDNKLRVWQDLHSFQGSVNDHKNGSPL-EIVHSHDFHRHLTAFRAVWDPKDWTDDLFMCGRFLGDAYLDGEEEDTANILHPVDLFSVKAGTVVHSLMDSGVPLICTSNKFSPTSDVIATAASGHLIFWSPSLK-DKNDEDGVERGKKY 505
            ++  CP++PCFLCK  GHT+L CP+R           R                 R TN+SLD         ++++  P ++   Q +C      ++ H +RVT LE+HP+    LLSGDK G L V            D             VH C +N++  +  N +I YT+SSDG +S   +    G P             + NLNPNGW G  S ++M+YGM  +  +  L +  + G +   D R        +      SKVT +  NP   D+++++ ND +  +WD RK     SL    H RVV+S YFSP +G+K+LTT  DN++RVW  +    G++      SP  EIVHSHDF+RHLT F+A WDPKD+T+ + + GR++ + Y           LHP+D     +G ++  +MD  +  I   NK  P  DV+ T +S  +  W P  + D  +E   ++ K+Y
Sbjct:  122 VYIDCPMKPCFLCKMPGHTTLTCPHRVAMEHGVIPAPR-----------------RNTNTSLDYVFQSQVKGKISMVKPQFLVPNQLECG----NIKFHQRRVTCLEFHPTKNSVLLSGDKKGLLGVWDYVKLHEKITYD------------SVHSCILNSMKIDAANDEILYTASSDGTISCTDLDTGIGSP-------------LLNLNPNGWNGP-STWRMIYGMDLNTDKGLLLVADNFGFLYLLDRRSKTRIGHPVLIHKKGSKVTSLHCNPAQPDVLLSSGNDHYARIWDTRKLEPNSSLASLAHGRVVNSGYFSPQSGNKILTTCQDNRIRVWDYIF---GNLQ-----SPSREIVHSHDFNRHLTPFKAEWDPKDYTETVAVIGRYISENY-------NGVALHPIDFIDTNSGKLLAEVMDPDITTISPVNKLHPRDDVLVTGSSRSIFIWKPKTEADLTEERAKQKAKEY 539          
BLAST of Gcaud2530.t1 vs. uniprot
Match: A0A0A0KE33_CUCSA (Uncharacterized protein n=8 Tax=Cucurbitaceae TaxID=3650 RepID=A0A0A0KE33_CUCSA)

HSP 1 Score: 249 bits (636), Expect = 5.890e-72
Identity = 158/466 (33.91%), Postives = 234/466 (50.21%), Query Frame = 0
Query:   44 CPLRPCFLCKKSGHTSLDCPYRTR------PNAHTQTLRRILRNRERLAHLHHFTRERETNSSLDRLNVALPYVRNRQFDCQLAFFGLRAHAKRVTALEWHPSG-RYLLSGDKAGALRVLALTNSLRDAALDPTVQPLFDAEPSQVHYCNINNIVFE-NNPDICYTSSSDGKVSALRIPLLRGVPTRPTEDPVHAYDTIANLNPNGWQGSVSQFKMVYGMSFDRKRNCLYIGASDGSIRRFDPRQPADDSADIKSKFHASKVTCIDVNPINSDLVVTASNDAHVCLWDARKFVETHSLGWYRHDRVVSSAYFSPNTGSKLLTTALDNKLRVWQDLHSFQGSVNDHKNGSPLEIVHSHDFHRHLTAFRAVWDPKDWTDDLFMCGRFLGDAYLDGEEEDTANILHPVDLFSVKAGTVVHSLMDSGVPLICTSNKFSPTSDVIATAASGHLIFWSPSLKDKNDEDGVER 501
            CP++PCFLCK  GHT++ CP+R        P +H  T   +L           +  ER+    +  +  A  YV   Q +C +    +R H++RVT LE+HP+  R LLSGDK G + V        D   +  V          +H C +NN+ F   N  + Y +SSDG +S              T+        + NLNP+GWQG  S ++M+YGM  + +++ +++  + G +   D R        +      SKV  +  NP+  DL+++  ND    +WD R+ V   SL    H RVV+SAYFSP +G K+LTT+ DN++RVW        S+  + +    EIVHSHDF+RHLT FRA WDPKD ++ L + GR++ + Y           LHP+D   V +G +V  +MD  +  I   NK  P  DV+A+ +S  L  W P    K+D + VE+
Sbjct:   97 CPMKPCFLCKMPGHTTMTCPHRVATEFGVIPASHKNTRNALL-----------YVFERQFKPHIPPIKPA--YVIPDQVNCAV----IRYHSRRVTCLEFHPTNNRLLLSGDKKGQVGVWDY-----DKVHEKVVY-------GNIHSCIVNNMRFSPTNDGMIYAASSDGTISC-------------TDMETGFSSPLMNLNPDGWQGPNS-WRMLYGMDINPEKHTVFVADNFGFLYLVDTRSNNRSGQAVLIHKKGSKVVGLHCNPLQPDLLLSCGNDHFARIWDIRRLVVGSSLYDLAHRRVVNSAYFSPISGCKILTTSQDNRIRVWD-------SIFGNLDSPSREIVHSHDFNRHLTPFRAEWDPKDPSESLAVVGRYISENY-------NGIALHPIDFIDVSSGQLVAEVMDPNITTISPVNKLHPRDDVLASGSSRSLFIWRP----KDDHELVEQ 501          
BLAST of Gcaud2530.t1 vs. uniprot
Match: A0A4S4F075_CAMSI (Uncharacterized protein n=2 Tax=Camellia sinensis TaxID=4442 RepID=A0A4S4F075_CAMSI)

HSP 1 Score: 249 bits (636), Expect = 6.170e-72
Identity = 153/455 (33.63%), Postives = 224/455 (49.23%), Query Frame = 0
Query:   44 CPLRPCFLCKKSGHTSLDCPYRTRPNAHTQTLRRILRNRERLAHLHH---FTRERETNSSLDRLNVALPYVRNRQFDCQLAFFGLRAHAKRVTALEWHPS-GRYLLSGDKAGALRVLALTNSLRDAALDPTVQPLFDAEPSQVHYCNINNIVFE-NNPDICYTSSSDGKVSALRIPLLRGVPTRPTEDPVHAYDTIANLNPNGWQGSVSQFKMVYGMSFDRKRNCLYIGASDGSIRRFDPRQPADDSADIKSKFHASKVTCIDVNPINSDLVVTASNDAHVCLWDARKFVETHSLGWYRHDRVVSSAYFSPNTGSKLLTTALDNKLRVWQDLHSFQGSVNDHKNGSPLEIVHSHDFHRHLTAFRAVWDPKDWTDDLFMCGRFLGDAYLDGEEEDTANILHPVDLFSVKAGTVVHSLMDSGVPLICTSNKFSPTSDVIATAASGHLIFWSPSLKDK 493
            CP++PCFLCK  GHT++ CP+R           R         H H+   +  ER+   ++  +  A  +V   Q +C +    +R H++RVT LE+HP+    LLSGDK G L V                          +H C +NN+ F+  N    Y +SSDG +S              T+       ++ NLNPNGWQG  S ++M+YG+  + ++  + +  + G +   D R  +     I      SKV  +  NP+  DL+++  ND    +WD R+     SL    H RVV+SAYFSP +GSK+LTT+ DN+LRVW  +    GS +        EIVHSHDF+RHLT FRA WDPKD ++ L + GR++ + Y           LHP+D   +  G +V  +MD  +  I   NK  P  DV+AT +S  +  W+P  K +
Sbjct:  103 CPMKPCFLCKTPGHTTMTCPHRIATEYGVIPAPR--------RHTHNSLDYVFERQLRPNIPAIKPA--FVIPDQVNCAV----IRYHSRRVTCLEFHPTRNNILLSGDKKGQLGVWDYCKVHEKIVY------------GNIHGCILNNMKFKPTNDGTVYAASSDGTISC-------------TDLETGISSSLMNLNPNGWQGP-SSWRMLYGLDVNSEKGVVLVADNFGYLYLMDIRSNSKVGETILIHKKGSKVVGLHCNPVQPDLLLSCGNDHFARIWDMRRLESGSSLCSLAHRRVVNSAYFSPRSGSKILTTSQDNRLRVWDSIFGNLGSPS-------REIVHSHDFNRHLTPFRAEWDPKDPSESLVVIGRYISENY-------NGAALHPIDFIDISTGKLVAEVMDPNITTISPVNKLHPRDDVLATGSSRSIFIWNPKEKSE 503          
BLAST of Gcaud2530.t1 vs. uniprot
Match: A0A2I0AHR7_9ASPA (Protein damaged DNA-binding 2 n=1 Tax=Apostasia shenzhenica TaxID=1088818 RepID=A0A2I0AHR7_9ASPA)

HSP 1 Score: 249 bits (635), Expect = 7.160e-72
Identity = 161/485 (33.20%), Postives = 247/485 (50.93%), Query Frame = 0
Query:   25 CYYCRDNNLTHRFDHI-HTTCPLRPCFLCKKSGHTSLDCPYRTRPNAHTQTLRRILRNRERLAHLHH-FTRERETNSSLDRLNVALPYVRNRQFDCQLAFFGLRAHAKRVTALEWHPS-GRYLLSGDKAGALRVLALTNSLRDAALDPTVQPLFDAEPSQVHYCNINNIVFEN-NPDICYTSSSDGKVSALRIPLLRGVPTRPTEDPVHAYDTIANLNPNGWQGSVSQFKMVYGMSFDRKRNCLYIGASDGSIRRFDPRQPADDSADIKSKFHASKVTCIDVNPINSDLVVTASNDAHVCLWDARKFVETHSLGWYRHDRVVSSAYFSPNTGSKLLTTALDNKLRVWQDLHSFQGSVNDHKNGSPLEIVHSHDFHRHLTAFRAVWDPKDWTDDLFMCGRFLGDAYLDGEEEDTANILHPVDLFSVKAGTVVHSLMDSGVPLICTSNKFSPTSDVIATAASGHLIFWSPSLKDKNDEDGVERGKKY 505
            C  C++      F    +  CP +PCFLCKK GHT++ CP+R           R    R +L  L + F RE + + S  +    +P         +L    +R H++RVT+LE+HP+    LLSGDK G + +    + L +       + L+D+    +H C +NN+ F+  N  + YTSSSDG +S     L  G+P             + ++NPNGW G  + ++M+YGM  +  +  + +  + G +   D R        I      SKV  +  NP   DL+++  ND    +WDAR+     SL    H RVV+SAYFSP++GSK+LTT+ DN++RVW        S+  + +    EIVHSHDF+RHLT FRA WDPKD ++ L + GR++ + +           LHP+D      G +V  ++D+ +  I   NK  P  D++AT +S  ++ W P  KD++ E   ER K++
Sbjct:   73 CKVCKEKGHQAGFQGATYIDCPKKPCFLCKKPGHTTMSCPHRVVLEHGIVPAPR----RNKLTLLDYVFEREFKPHISKIKPKFVVPD--------KLEHVLVRFHSRRVTSLEFHPTLSSVLLSGDKKGQIGIWNY-DKLHE-------RTLYDS----IHSCIVNNMKFDTRNNGLLYTSSSDGTISCT--DLETGIPV-----------LLMDVNPNGWNGPAT-WRMLYGMDTNLDKGLVLVADNFGYLYLLDGRTKVKMGEPILIHKKGSKVVGLHCNPAQPDLLLSCGNDHFGHIWDARRLDNGSSLASLAHGRVVNSAYFSPHSGSKILTTSQDNRIRVWD-------SIFGNLDSPSREIVHSHDFNRHLTPFRAEWDPKDPSESLAVIGRYISENF-------NGVALHPIDFIDTSTGQLVAEVVDTDLTTISPVNKLHPRDDILATGSSRSVLIWRPERKDEDREQLPERMKEF 505          
BLAST of Gcaud2530.t1 vs. uniprot
Match: A0A251VMH6_HELAN (Putative damaged DNA binding 2 n=1 Tax=Helianthus annuus TaxID=4232 RepID=A0A251VMH6_HELAN)

HSP 1 Score: 248 bits (634), Expect = 1.080e-71
Identity = 154/452 (34.07%), Postives = 230/452 (50.88%), Query Frame = 0
Query:   44 CPLRPCFLCKKSGHTSLDCPYRTRPNAHTQTLRRILRNRERLAHLHHFTRERETNSSLDRLNVALPYVRNRQFDCQLAFFGLRAHAKRVTALEWHPSGR-YLLSGDKAGALRVLALTNSLRDAALDPTVQPLFDAEPSQVHYCNINNIVF-ENNPDICYTSSSDGKVSALRIPLLRGVPTRPTEDPVHAYDTIANLNPNGWQGSVSQFKMVYGMSFDRKRNCLYIGASDGSIRRFDPRQPADDSADIKSKFHASKVTCIDVNPINSDLVVTASNDAHVCLWDARKFVETHSLGWYRHDRVVSSAYFSPNTGSKLLTTALDNKLRVWQDLHSFQGSVNDHKNGSPLEIVHSHDFHRHLTAFRAVWDPKDWTDDLFMCGRFLGDAYLDGEEEDTANILHPVDLFSVKAGTVVHSLMDSGVPLICTSNKFSPTSDVIATAASGHLIFWSPSLKDK 493
            CP++PCFLCK  GHT+++CP+R            I  +R+R  +   +  ER+    +  +  A  +V   + +C +    +R H++RVT LE+HP+    LLSGDK G L V            + TV          +H C +NN+ F   N    YT SSDG V+     L  G+ T           ++ +LNPNGWQG  S ++M+YGM F+ ++  + +  S G +   D R  +     +      +KV  +  NP+  DL+++  ND    +WD R       L    H RVV+SAYFSP++GSK++TT++DN++RVW        S+  + +    EIVHSHDF+RHLT FRA WDPKD ++ L + GR++ + Y           LHP+D   +  G +V  +MD  +  I   NK  P  DV+AT +S  L  W P  K +
Sbjct:   94 CPMKPCFLCKLPGHTTVNCPHRV-----AMEFGVIPASRKRTHNSLDYVFERQLRRGVPSIKPA--FVIPDEVNCAV----IRYHSRRVTCLEFHPTNNNVLLSGDKKGQLGVWDFGK-----VYEKTVY-------GNIHTCLLNNMKFGPANDGTVYTVSSDGTVNCT--DLETGLST-----------SLMDLNPNGWQGRNS-WRMLYGMEFNAEKGLVLVADSFGYLHMVDARANSKTGDSVLIHKKGTKVVGLHCNPLQPDLLLSCGNDHFARMWDIRHLEAESCLHALPHKRVVNSAYFSPSSGSKIVTTSIDNRIRVWD-------SIFGNLDTPSREIVHSHDFNRHLTPFRAEWDPKDPSESLVVIGRYISENY-------NGAALHPIDFIDISTGQLVAEVMDPNITTISPVNKLHPRDDVLATGSSRSLFIWRPKEKSE 494          
The following BLAST results are available for this feature:
BLAST of Gcaud2530.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2V3J0W6_9FLOR3.740e-26068.39Protein DAMAGED DNA-BINDING 2 n=1 Tax=Gracilariops... [more]
R7QBI4_CHOCR2.100e-13746.23Uncharacterized protein n=1 Tax=Chondrus crispus T... [more]
A0A1U8MCX5_GOSHI2.340e-7433.47protein DAMAGED DNA-BINDING 2-like n=18 Tax=Gossyp... [more]
A0A061GWF2_THECC6.150e-7434.78Damaged DNA binding 2 n=3 Tax=Byttnerioideae TaxID... [more]
A0A6P5ZJR8_DURZI3.490e-7234.29protein DAMAGED DNA-BINDING 2 n=1 Tax=Durio zibeth... [more]
A0A5J9UE53_9POAL5.600e-7232.50DNA damage-binding protein 2 n=1 Tax=Eragrostis cu... [more]
A0A0A0KE33_CUCSA5.890e-7233.91Uncharacterized protein n=8 Tax=Cucurbitaceae TaxI... [more]
A0A4S4F075_CAMSI6.170e-7233.63Uncharacterized protein n=2 Tax=Camellia sinensis ... [more]
A0A2I0AHR7_9ASPA7.160e-7233.20Protein damaged DNA-binding 2 n=1 Tax=Apostasia sh... [more]
A0A251VMH6_HELAN1.080e-7134.07Putative damaged DNA binding 2 n=1 Tax=Helianthus ... [more]

Pages

back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001680WD40 repeatSMARTSM00320WD40_4coord: 224..277
e-value: 48.0
score: 6.4
coord: 170..212
e-value: 400.0
score: 0.6
coord: 447..487
e-value: 22.0
score: 8.5
coord: 329..368
e-value: 0.05
score: 22.7
coord: 115..157
e-value: 0.59
score: 18.5
coord: 283..323
e-value: 0.0023
score: 27.2
IPR001680WD40 repeatPFAMPF00400WD40coord: 292..323
e-value: 0.056
score: 14.3
coord: 125..149
e-value: 0.011
score: 16.5
IPR001680WD40 repeatPROSITEPS50082WD_REPEATS_2coord: 335..368
score: 9.739832
IPR001680WD40 repeatPROSITEPS50082WD_REPEATS_2coord: 125..155
score: 9.171722
IPR001680WD40 repeatPROSITEPS50082WD_REPEATS_2coord: 290..332
score: 9.806668
IPR015943WD40/YVTN repeat-like-containing domain superfamilyGENE3D2.130.10.10coord: 125..489
e-value: 2.0E-63
score: 216.4
NoneNo IPR availableGENE3D4.10.60.10coord: 9..73
e-value: 8.8E-6
score: 27.4
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 496..552
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 536..552
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 496..514
IPR033312DNA damage-binding protein 2PANTHERPTHR15169DAMAGE-SPECIFIC DNA BINDING PROTEIN 2coord: 26..545
IPR001878Zinc finger, CCHC-typePROSITEPS50158ZF_CCHCcoord: 49..63
score: 8.878027
IPR036322WD40-repeat-containing domain superfamilySUPERFAMILY50978WD40 repeat-likecoord: 125..487

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NODE_290_length_32094_cov_4.541512contigNODE_290_length_32094_cov_4.541512:11954..13612 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria caudata M_176_S67 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gcaud2530.t1Gcaud2530.t1Gracilaria caudata M_176_S67 malemRNANODE_290_length_32094_cov_4.541512 11954..13612 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gcaud2530.t1 ID=Gcaud2530.t1|Name=Gcaud2530.t1|organism=Gracilaria caudata M_176_S67 male|type=polypeptide|length=553bp
MATRIPAGDERTGLLLRKRYQSVGCYYCRDNNLTHRFDHIHTTCPLRPCF
LCKKSGHTSLDCPYRTRPNAHTQTLRRILRNRERLAHLHHFTRERETNSS
LDRLNVALPYVRNRQFDCQLAFFGLRAHAKRVTALEWHPSGRYLLSGDKA
GALRVLALTNSLRDAALDPTVQPLFDAEPSQVHYCNINNIVFENNPDICY
TSSSDGKVSALRIPLLRGVPTRPTEDPVHAYDTIANLNPNGWQGSVSQFK
MVYGMSFDRKRNCLYIGASDGSIRRFDPRQPADDSADIKSKFHASKVTCI
DVNPINSDLVVTASNDAHVCLWDARKFVETHSLGWYRHDRVVSSAYFSPN
TGSKLLTTALDNKLRVWQDLHSFQGSVNDHKNGSPLEIVHSHDFHRHLTA
FRAVWDPKDWTDDLFMCGRFLGDAYLDGEEEDTANILHPVDLFSVKAGTV
VHSLMDSGVPLICTSNKFSPTSDVIATAASGHLIFWSPSLKDKNDEDGVE
RGKKYRRSGKRDADDDGDGDDDDRGGAPGPKKKLKTVIAKSTRRSTRSRS
KV*
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001680WD40_repeat
IPR015943WD40/YVTN_repeat-like_dom_sf
IPR033312DDB2
IPR001878Znf_CCHC
IPR036322WD40_repeat_dom_sf