Gcaud2524.t1 (polypeptide) Gracilaria caudata M_176_S67 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGcaud2524.t1
Unique NameGcaud2524.t1
Typepolypeptide
OrganismGracilaria caudata M_176_S67 male (Gracilaria caudata M_176_S67 male)
Sequence length148
Homology
BLAST of Gcaud2524.t1 vs. uniprot
Match: A0A2V3J0Q2_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J0Q2_9FLOR)

HSP 1 Score: 244 bits (624), Expect = 2.920e-81
Identity = 126/148 (85.14%), Postives = 133/148 (89.86%), Query Frame = 0
Query:    1 MAAFVKAFVARGTLPLLARPQCLTPL-VRARHHNSNRRARITMIRGFPNNFNNDFAHNSGDRRVFDELVDFPCVFTFKVIGMAQGDFMGDIVDSVATALETDKKYLKTSYRDKGKYRSITLKAPVNTAEQIYSVYAAIDRDPRVKFKF 147
            M AF++A VAR         +CLTPL VRARH  S+R ARI+MIRGFPNNFNNDFAHNSGDRRVF+ELVDFPCVFTFKVIGMAQGDFMGDIVDSVA+ALETDKKYLKTSYRDKGKYRSITLKAPVNTAEQIYSVYAAIDRDPRVKFKF
Sbjct:    1 MTAFIRALVARPVSSAFTTRRCLTPLSVRARH--SHRHARISMIRGFPNNFNNDFAHNSGDRRVFNELVDFPCVFTFKVIGMAQGDFMGDIVDSVASALETDKKYLKTSYRDKGKYRSITLKAPVNTAEQIYSVYAAIDRDPRVKFKF 146          
BLAST of Gcaud2524.t1 vs. uniprot
Match: A0A6T6NA82_9RHOD (Hypothetical protein n=1 Tax=Rhodosorus marinus TaxID=101924 RepID=A0A6T6NA82_9RHOD)

HSP 1 Score: 145 bits (365), Expect = 5.970e-42
Identity = 70/113 (61.95%), Postives = 88/113 (77.88%), Query Frame = 0
Query:   35 NRRARITMIRGFPNNFNNDFAHNSGDRRVFDELVDFPCVFTFKVIGMAQGDFMGDIVDSVATALETDKKYLKTSYRDKGKYRSITLKAPVNTAEQIYSVYAAIDRDPRVKFKF 147
            N+R   +MIRGFPN FNN+  +  G  R+  ELVDFPCVFTFK+IG  +GDF+ DI+DSV+T +   ++ LK S+RDKG YRSITL  P N+A+Q+YS+YAAIDRDPRVKFKF
Sbjct:   27 NKRVVPSMIRGFPNEFNNN-PNADGRERLIGELVDFPCVFTFKIIGKNEGDFVADILDSVSTCVNIQQEKLKHSFRDKGSYRSITLDVPCNSADQVYSIYAAIDRDPRVKFKF 138          
BLAST of Gcaud2524.t1 vs. uniprot
Match: M2XRZ9_GALSU (Uncharacterized protein n=1 Tax=Galdieria sulphuraria TaxID=130081 RepID=M2XRZ9_GALSU)

HSP 1 Score: 145 bits (366), Expect = 2.940e-41
Identity = 70/113 (61.95%), Postives = 89/113 (78.76%), Query Frame = 0
Query:   35 NRRARITMIRGFPNNFNNDFAHNSGDRRVFDELVDFPCVFTFKVIGMAQGDFMGDIVDSVATALETDKKYLKTSYRDKGKYRSITLKAPVNTAEQIYSVYAAIDRDPRVKFKF 147
            +RR  +  IRGFPN FN+++ +  G RR+ DELVDFPC F FK+IG+ QG+F+ DIVD VA  L+ D  Y++ S RDKGKYRSIT+ AP N++EQ+YS+YAAIDRDPRVKFKF
Sbjct:   92 SRRRVLKAIRGFPNEFNHNW-NADGQRRLIDELVDFPCKFQFKIIGIRQGNFVEDIVDCVAEVLQIDPSYMEVSTRDKGKYRSITIDAPCNSSEQVYSIYAAIDRDPRVKFKF 203          
BLAST of Gcaud2524.t1 vs. uniprot
Match: A0A5J4YP83_PORPP (UPF0250 protein n=1 Tax=Porphyridium purpureum TaxID=35688 RepID=A0A5J4YP83_PORPP)

HSP 1 Score: 127 bits (318), Expect = 2.500e-33
Identity = 63/121 (52.07%), Postives = 86/121 (71.07%), Query Frame = 0
Query:   29 ARHHNSNRRARITMIRGFPNNFN-------NDFAHNSGDRRVFDELVDFPCVFTFKVIGMAQGDFMGDIVDSVATALETDKKYLKTSYRDKGKYRSITLKAPVNTAEQIYSVYAAIDRDPR 142
            AR  ++ R  R TM    P++F+       +D      ++R+ D+LVD+PC++TFKVIG+ QGDF+GDI DS+A  LE D   LK S+RDKG+YRS+T+ AP N+AEQ+YS+YAAIDRDPR
Sbjct:   35 ARPRDARRTLRSTMCMNVPDSFSEKPLTAKDDIERQEAEQRL-DDLVDWPCMYTFKVIGLRQGDFIGDISDSIAQVLEVDASVLKVSHRDKGRYRSLTVNAPCNSAEQVYSIYAAIDRDPR 154          
BLAST of Gcaud2524.t1 vs. uniprot
Match: M1V501_CYAM1 (Uncharacterized protein n=2 Tax=cellular organisms TaxID=131567 RepID=M1V501_CYAM1)

HSP 1 Score: 102 bits (254), Expect = 1.150e-24
Identity = 68/156 (43.59%), Postives = 87/156 (55.77%), Query Frame = 0
Query:    6 KAFVARGTLPLLARPQCLTPLVRARHHNSNRRARITMIRGFPNN--FNNDFAHNSGDRRVFDELVDFPCVFTFKVIGMAQGDFMGDIVDSVATALET------------DKKYLKTSYRDKGKYRSITLKAPVNTAEQIYSVYAAIDRDPRVKFKF 147
            + +VAR T  L  R       VR  H +S  R    ++RGFPN   FN+D     G RR+ +ELV FP  F FKV+G+ QGDF  D+V  VA AL+             D +   T  RD+GKYRS+T+ A   T  Q+YSVY A++RDPRV FKF
Sbjct:   34 RLYVARATSSL--RSSGHRARVRPLHCSSGLRM---LLRGFPNPGAFNSD-----GKRRIIEELVQFPTEFEFKVVGLRQGDFTDDVVGLVAGALQRAENLDVRNTTSRDDRVRITKVRDRGKYRSLTIVAFCETGAQVYSVYEALERDPRVLFKF 179          
BLAST of Gcaud2524.t1 vs. uniprot
Match: A0A7S1GTH7_HEMAN (Hypothetical protein n=2 Tax=Hemiselmis andersenii TaxID=464988 RepID=A0A7S1GTH7_HEMAN)

HSP 1 Score: 103 bits (258), Expect = 1.430e-24
Identity = 47/84 (55.95%), Postives = 65/84 (77.38%), Query Frame = 0
Query:   64 FDELVDFPCVFTFKVIGMAQGDFMGDIVDSVATALETDKKYLKTSYRDKGKYRSITLKAPVNTAEQIYSVYAAIDRDPRVKFKF 147
            F+ LVDFPC+FT KV+G  QG+FM DI+D+V   +   +  L+ S+RD GK+RSITL+ PV +++Q+Y+VY AI RDPRVK+KF
Sbjct:  164 FEHLVDFPCLFTVKVVGARQGEFMEDILDAVGGVVGKKRDELEHSFRDNGKWRSITLQVPVESSKQLYAVYEAIGRDPRVKYKF 247          
BLAST of Gcaud2524.t1 vs. uniprot
Match: A0A7J7IEN8_9RHOD (Uncharacterized protein n=1 Tax=Cyanidiococcus yangmingshanensis TaxID=2690220 RepID=A0A7J7IEN8_9RHOD)

HSP 1 Score: 100 bits (248), Expect = 1.680e-24
Identity = 55/120 (45.83%), Postives = 73/120 (60.83%), Query Frame = 0
Query:   42 MIRGFPNN--FNNDFAHNSGDRRVFDELVDFPCVFTFKVIGMAQGDFMGDIVDSVATALET------------DKKYLKTSYRDKGKYRSITLKAPVNTAEQIYSVYAAIDRDPRVKFKF 147
            ++RGFPN   FN+D     G RR+ +ELV FP  F FK++G+ QGDF  D+   VA AL+             D++   T  RD+GKYRS+T+ A   T  Q+YSVY A++RDPRV FKF
Sbjct:    2 LLRGFPNPGAFNSD-----GKRRIIEELVQFPTDFEFKIVGLRQGDFTADVAGLVAGALQRAENLDVRNTSSMDERVRVTKVRDRGKYRSVTIVAFCETGAQVYSVYEALERDPRVLFKF 116          
BLAST of Gcaud2524.t1 vs. uniprot
Match: A0A6U5NVB4_9STRA (Hypothetical protein n=1 Tax=Grammatophora oceanica TaxID=210454 RepID=A0A6U5NVB4_9STRA)

HSP 1 Score: 92.8 bits (229), Expect = 2.710e-21
Identity = 41/86 (47.67%), Postives = 61/86 (70.93%), Query Frame = 0
Query:   62 RVFDELVDFPCVFTFKVIGMAQGDFMGDIVDSVATALETDKKYLKTSYRDKGKYRSITLKAPVNTAEQIYSVYAAIDRDPRVKFKF 147
            RVFD LV++PC FT K++G  +G+F  ++V  VA   E + + +  + R  GK+ S+T+KAPV  AE +Y++Y A+D+DPRVKFKF
Sbjct:   60 RVFDALVEYPCKFTMKIVGANEGNFAQEMVSLVADVCEKEMEDVAYTTRAMGKWTSVTVKAPVENAEMLYAIYEAVDKDPRVKFKF 145          
BLAST of Gcaud2524.t1 vs. uniprot
Match: A0A7S0UJK5_9STRA (Hypothetical protein n=1 Tax=Pseudo-nitzschia delicatissima TaxID=44447 RepID=A0A7S0UJK5_9STRA)

HSP 1 Score: 95.1 bits (235), Expect = 4.060e-21
Identity = 45/86 (52.33%), Postives = 62/86 (72.09%), Query Frame = 0
Query:   62 RVFDELVDFPCVFTFKVIGMAQGDFMGDIVDSVATALETDKKYLKTSYRDKGKYRSITLKAPVNTAEQIYSVYAAIDRDPRVKFKF 147
            RVF+ LVD+P +FT K++G  +G F+ +IV  VA A ETD   +K + +  GK+ S+T+KAPV TAE +YS+Y  +D DPRVKFKF
Sbjct:  168 RVFEALVDYPSIFTMKIVGANEGTFVTEIVALVAEACETDLTNIKYTTKVMGKWVSVTVKAPVQTAEMLYSLYEKVDLDPRVKFKF 253          
BLAST of Gcaud2524.t1 vs. uniprot
Match: A0A6U6KEL0_9STRA (Hypothetical protein n=1 Tax=Odontella aurita TaxID=265563 RepID=A0A6U6KEL0_9STRA)

HSP 1 Score: 94.0 bits (232), Expect = 1.860e-20
Identity = 44/86 (51.16%), Postives = 62/86 (72.09%), Query Frame = 0
Query:   62 RVFDELVDFPCVFTFKVIGMAQGDFMGDIVDSVATALETDKKYLKTSYRDKGKYRSITLKAPVNTAEQIYSVYAAIDRDPRVKFKF 147
            RVF+ LV++PC FT K++G  +G F  DIV  VA + E D + ++   R KGK+ S+T++APV +AE +Y++Y  IDRDPRVKFKF
Sbjct:  197 RVFEALVEYPCKFTMKIVGANEGGFAKDIVGVVAESCEVDVEDVENKTRLKGKWVSVTVQAPVKSAEMLYALYENIDRDPRVKFKF 282          
The following BLAST results are available for this feature:
BLAST of Gcaud2524.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2V3J0Q2_9FLOR2.920e-8185.14Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
A0A6T6NA82_9RHOD5.970e-4261.95Hypothetical protein n=1 Tax=Rhodosorus marinus Ta... [more]
M2XRZ9_GALSU2.940e-4161.95Uncharacterized protein n=1 Tax=Galdieria sulphura... [more]
A0A5J4YP83_PORPP2.500e-3352.07UPF0250 protein n=1 Tax=Porphyridium purpureum Tax... [more]
M1V501_CYAM11.150e-2443.59Uncharacterized protein n=2 Tax=cellular organisms... [more]
A0A7S1GTH7_HEMAN1.430e-2455.95Hypothetical protein n=2 Tax=Hemiselmis andersenii... [more]
A0A7J7IEN8_9RHOD1.680e-2445.83Uncharacterized protein n=1 Tax=Cyanidiococcus yan... [more]
A0A6U5NVB4_9STRA2.710e-2147.67Hypothetical protein n=1 Tax=Grammatophora oceanic... [more]
A0A7S0UJK5_9STRA4.060e-2152.33Hypothetical protein n=1 Tax=Pseudo-nitzschia deli... [more]
A0A6U6KEL0_9STRA1.860e-2051.16Hypothetical protein n=1 Tax=Odontella aurita TaxI... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D3.30.70.260coord: 61..146
e-value: 8.7E-20
score: 72.9
IPR007454Uncharacterised protein family UPF0250PFAMPF04359DUF493coord: 66..145
e-value: 1.1E-17
score: 64.4
IPR027471YbeD-like domain superfamilySUPERFAMILY117991YbeD/HP0495-likecoord: 63..145

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NODE_290_length_32094_cov_4.541512contigNODE_290_length_32094_cov_4.541512:2406..2849 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria caudata M_176_S67 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gcaud2524.t1Gcaud2524.t1Gracilaria caudata M_176_S67 malemRNANODE_290_length_32094_cov_4.541512 2406..2849 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gcaud2524.t1 ID=Gcaud2524.t1|Name=Gcaud2524.t1|organism=Gracilaria caudata M_176_S67 male|type=polypeptide|length=148bp
MAAFVKAFVARGTLPLLARPQCLTPLVRARHHNSNRRARITMIRGFPNNF
NNDFAHNSGDRRVFDELVDFPCVFTFKVIGMAQGDFMGDIVDSVATALET
DKKYLKTSYRDKGKYRSITLKAPVNTAEQIYSVYAAIDRDPRVKFKF*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR007454UPF0250
IPR027471YbeD-like_sf