Gcaud1222.t1 (polypeptide) Gracilaria caudata M_176_S67 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGcaud1222.t1
Unique NameGcaud1222.t1
Typepolypeptide
OrganismGracilaria caudata M_176_S67 male (Gracilaria caudata M_176_S67 male)
Sequence length156
Homology
The following BLAST results are available for this feature:
BLAST of Gcaud1222.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 0
Match NameE-valueIdentityDescription
back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..63
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 131..152
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 117..130
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 96..116
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 64..84
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 153..156
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 85..95
NoneNo IPR availableTMHMMTMhelixcoord: 97..116
NoneNo IPR availableTMHMMTMhelixcoord: 65..87

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NODE_2412_length_5731_cov_4.498050contigNODE_2412_length_5731_cov_4.498050:2..468 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria caudata M_176_S67 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gcaud1222.t1Gcaud1222.t1Gracilaria caudata M_176_S67 malemRNANODE_2412_length_5731_cov_4.498050 2..468 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gcaud1222.t1 ID=Gcaud1222.t1|Name=Gcaud1222.t1|organism=Gracilaria caudata M_176_S67 male|type=polypeptide|length=156bp
MTRTESDARPDTPLLCAEHTIPVKQHQYVYDLNEAADSLELKNQHHQHTE
PLSLTVNYESVLKGYLLVALSSIVFGALTTALLRHATNDFGFRPQTILFA
VGAVNLFISAPLLLLIECTSRSSFALEEWKGVLLLLRGVAGSASNLMFFE
AVQRIP
back to top