Gcaud2053.t1 (polypeptide) Gracilaria caudata M_176_S67 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGcaud2053.t1
Unique NameGcaud2053.t1
Typepolypeptide
OrganismGracilaria caudata M_176_S67 male (Gracilaria caudata M_176_S67 male)
Sequence length800
Homology
BLAST of Gcaud2053.t1 vs. uniprot
Match: A0A345U6N6_9FLOR (Phycobiliprotein ApcE n=7 Tax=Gracilariaceae TaxID=31469 RepID=A0A345U6N6_9FLOR)

HSP 1 Score: 1233 bits (3189), Expect = 0.000e+0
Identity = 629/630 (99.84%), Postives = 630/630 (100.00%), Query Frame = 0
Query:    1 MSAIIQAEQQDRFLQLGELDELITFLNSGNKRLEVADILTKNANILVSKAADKIFVGGSPISYLERPQASFLAMDKLNNQINPQSLSGNIQNNLVGIVASTFNTSDSLPAGFKPISIVRYGTSRMKKSLRDLDWFLRYLTYAIVAGDPNILSVNIRGLRDLIDNACSSAAAIVALREMRKIALSIFNEDIKGQELLKEYFDIIISEFDQSALTDKIRRRTSGDLQGLRLPQIYTKSSILKQRFVMKTSLSSEEKGNVIKACYRQIFQRDISKAYGLNFKDLESQVKNGSLSIKEFIRCIGKSYIYRKQFVQPFVNSRVVELAFRHFLGRGISSLEEFQKYFAVLSSRGLDGLIDNMINSTEYADYFGEETVPYLRSLGEEAQEARNWGAQIDLLKYSTAFRKIPQFVTLFSDYKSNLPDQHPYGLSNDPLLIQFGAIFAKNRVNLRKKSSPFGKDTRRILPRSGPGIYSQISSPNLRSKVSGSLGPKTFQLNPSPLDNNIEQVIKAVYLRVFGRFIYQAEQVVIKKFEDLFKDRQISVREFISELTKSSVFRSLYWDNLYICKAIEYIHNRLIGRPTYGRQEINKYFDIAYKQGYYKMIDALMNSLEYIETFGDNIVPYERYITPSELAN 630
            MSAIIQAEQQDRFLQLGELDELITFLNSGNKRLEVADILTKNANILVSKAADKIFVGGSPISYLERPQASFLAMDKLNNQINPQSLSGNIQNNLVGIVASTFNTSDSLPAGFKPISIVRYGTSRMKKSLRDLDWFLRYLTYAIVAGDPNILSVNIRGLRDLIDNACSSAAAIVALREMRKIALSIFNEDIKGQELLKEYFDIIISEFDQSALTDKIRRRTSGDLQGLRLPQIYTKSSILKQRFVMKTSLSSEEKGNVIKACYRQIFQRDISKAYGLNFKDLESQVKNGSLSIKEFIRCIGKSYIYRKQFVQPFVNSRVVELAFRHFLGRGISSLEEFQKYFAVLSSRGLDGLIDNMINSTEYADYFGEETVPYLRSLGEEAQEARNWGAQIDLLKYSTAFRKIPQFVTLFSDYKSNLPDQHPYGLSNDPLLIQFGAIFAKNRVNLRKKSSPFGKDTRRILPRSGPGIYSQISSPNLRSKVSGSLGPKTFQLNPSPLDNNIEQVIKAVYLRVFGRFIYQAEQVVIKKFEDLFKDRQISVREFISELTKSSVFRSLYWDNLYICKAIEYIHNRLIGRPTYGRQEINKYFDIAYKQGYYKMIDALMNSLEYIETFGDNIVPYERYITPSELA+
Sbjct:   22 MSAIIQAEQQDRFLQLGELDELITFLNSGNKRLEVADILTKNANILVSKAADKIFVGGSPISYLERPQASFLAMDKLNNQINPQSLSGNIQNNLVGIVASTFNTSDSLPAGFKPISIVRYGTSRMKKSLRDLDWFLRYLTYAIVAGDPNILSVNIRGLRDLIDNACSSAAAIVALREMRKIALSIFNEDIKGQELLKEYFDIIISEFDQSALTDKIRRRTSGDLQGLRLPQIYTKSSILKQRFVMKTSLSSEEKGNVIKACYRQIFQRDISKAYGLNFKDLESQVKNGSLSIKEFIRCIGKSYIYRKQFVQPFVNSRVVELAFRHFLGRGISSLEEFQKYFAVLSSRGLDGLIDNMINSTEYADYFGEETVPYLRSLGEEAQEARNWGAQIDLLKYSTAFRKIPQFVTLFSDYKSNLPDQHPYGLSNDPLLIQFGAIFAKNRVNLRKKSSPFGKDTRRILPRSGPGIYSQISSPNLRSKVSGSLGPKTFQLNPSPLDNNIEQVIKAVYLRVFGRFIYQAEQVVIKKFEDLFKDRQISVREFISELTKSSVFRSLYWDNLYICKAIEYIHNRLIGRPTYGRQEINKYFDIAYKQGYYKMIDALMNSLEYIETFGDNIVPYERYITPSELAS 651          
BLAST of Gcaud2053.t1 vs. uniprot
Match: A0A345U791_9FLOR (Phycobiliprotein ApcE n=13 Tax=Gracilaria TaxID=2774 RepID=A0A345U791_9FLOR)

HSP 1 Score: 1131 bits (2925), Expect = 0.000e+0
Identity = 567/629 (90.14%), Postives = 604/629 (96.03%), Query Frame = 0
Query:    1 MSAIIQAEQQDRFLQLGELDELITFLNSGNKRLEVADILTKNANILVSKAADKIFVGGSPISYLERPQASFLAMDKLNNQINPQSLSGNIQNNLVGIVASTFNTSDSLPAGFKPISIVRYGTSRMKKSLRDLDWFLRYLTYAIVAGDPNILSVNIRGLRDLIDNACSSAAAIVALREMRKIALSIFNEDIKGQELLKEYFDIIISEFDQSALTDKIRRRTSGDLQGLRLPQIYTKSSILKQRFVMKTSLSSEEKGNVIKACYRQIFQRDISKAYGLNFKDLESQVKNGSLSIKEFIRCIGKSYIYRKQFVQPFVNSRVVELAFRHFLGRGISSLEEFQKYFAVLSSRGLDGLIDNMINSTEYADYFGEETVPYLRSLGEEAQEARNWGAQIDLLKYSTAFRKIPQFVTLFSDYKSNLPDQHPYGLSNDPLLIQFGAIFAKNRVNLRKKSSPFGKDTRRILPRSGPGIYSQISSPNLRSKVSGSLGPKTFQLNPSPLDNNIEQVIKAVYLRVFGRFIYQAEQVVIKKFEDLFKDRQISVREFISELTKSSVFRSLYWDNLYICKAIEYIHNRLIGRPTYGRQEINKYFDIAYKQGYYKMIDALMNSLEYIETFGDNIVPYERYITPSELA 629
            MSAI QAEQQDRFL LGEL++LI FLNSGNKRLEVAD+LTKNANILVSKAADKIFVGGSPISYLERPQASFL+  +LNN  N Q+LSG+IQNNL GIV+S F+TSDSLPAGFKPISIVRYGTSRMKKSLRDLDWFLRYLTYAIVAGDPNILSVNIRGLRDLIDNACSSAAAIVALREMRKIALSIFN+DI+GQ+L+KEYFD II+EFDQSALTDK+RRRTSGDLQGLRLPQIYTKSSI+KQRFVMKTSLSSEEK NVIKACYRQIFQRDISKAYGLNFKDLES+VKNG+LSIKEFIRC+GKSYIYRKQFVQPFVNSRV ELAFRHFLGRGISSLEEF+KYFAVLSSRGLDGLID M+NSTEYADYFGEETVPYLRSLGEEAQEARNWGAQI+LL YST FRKIPQFVTLFSDY+SNLPDQHPYGLSNDPLLIQFGAIFA+N +NLRKKSSPFGKDTRRILPRSGPGIYSQISSPNLRSK+SG LGPK FQLN   L+NNIEQ+IKAVYLR+FGRF+YQ EQV IKKFEDLFKDRQISVR+FISELTKSSVFRSLYW+NLYICK++EYIHNRLIGRPTYGRQEINKYFDI YKQGYYKMIDA++NSLEYIETFG+NIVPYERYITPSELA
Sbjct:   22 MSAISQAEQQDRFLDLGELNQLIAFLNSGNKRLEVADVLTKNANILVSKAADKIFVGGSPISYLERPQASFLSTGELNNGSNLQNLSGDIQNNLSGIVSSPFSTSDSLPAGFKPISIVRYGTSRMKKSLRDLDWFLRYLTYAIVAGDPNILSVNIRGLRDLIDNACSSAAAIVALREMRKIALSIFNQDIQGQDLVKEYFDTIITEFDQSALTDKLRRRTSGDLQGLRLPQIYTKSSIIKQRFVMKTSLSSEEKNNVIKACYRQIFQRDISKAYGLNFKDLESKVKNGTLSIKEFIRCLGKSYIYRKQFVQPFVNSRVTELAFRHFLGRGISSLEEFKKYFAVLSSRGLDGLIDAMMNSTEYADYFGEETVPYLRSLGEEAQEARNWGAQIELLNYSTVFRKIPQFVTLFSDYRSNLPDQHPYGLSNDPLLIQFGAIFAQNCINLRKKSSPFGKDTRRILPRSGPGIYSQISSPNLRSKMSGPLGPKIFQLNQVDLENNIEQIIKAVYLRIFGRFVYQFEQVTIKKFEDLFKDRQISVRQFISELTKSSVFRSLYWNNLYICKSVEYIHNRLIGRPTYGRQEINKYFDIVYKQGYYKMIDAMVNSLEYIETFGENIVPYERYITPSELA 650          
BLAST of Gcaud2053.t1 vs. uniprot
Match: A0A345U7U5_GRAGA (Phycobiliprotein ApcE n=2 Tax=Gracilaria TaxID=2774 RepID=A0A345U7U5_GRAGA)

HSP 1 Score: 1110 bits (2872), Expect = 0.000e+0
Identity = 557/640 (87.03%), Postives = 600/640 (93.75%), Query Frame = 0
Query:    1 MSAIIQAEQQDRFLQLGELDELITFLNSGNKRLEVADILTKNANILVSKAADKIFVGGSPISYLERPQASFLAMDKLNNQINPQSLSGNIQNNLVGIVASTFNTSDSLPAGFKPISIVRYGTSRMKKSLRDLDWFLRYLTYAIVAGDPNILSVNIRGLRDLIDNACSSAAAIVALREMRKIALSIFNEDIKGQELLKEYFDIIISEFDQSALTDKIRRRTSGDLQGLRLPQIYTKSSILKQRFVMKTSLSSEEKGNVIKACYRQIFQRDISKAYGLNFKDLESQVKNGSLSIKEFIRCIGKSYIYRKQFVQPFVNSRVVELAFRHFLGRGISSLEEFQKYFAVLSSRGLDGLIDNMINSTEYADYFGEETVPYLRSLGEEAQEARNWGAQIDLLKYSTAFRKIPQFVTLFSDYKSNLPDQHPYGLSNDPLLIQFGAIFAKNRVNLRKKSSPFGKDTRRILPRSGPGIYSQISSPNLRSKVSGSLGPKTFQLNPSP-----------LDNNIEQVIKAVYLRVFGRFIYQAEQVVIKKFEDLFKDRQISVREFISELTKSSVFRSLYWDNLYICKAIEYIHNRLIGRPTYGRQEINKYFDIAYKQGYYKMIDALMNSLEYIETFGDNIVPYERYITPSELA 629
            +SAI QAEQQDRFLQLGELD+L+TFLNSGNKRLEVADILTKNANILVSKAADKIFVGG+PISYLERPQASFL++ KLNNQ N Q+LSG+IQNNL GIV+S F TSD LPAGFKPISI+RYG  RMKKSLRDLDWFLRYLTYAIVAGDPNILSVNIRGLRDLIDNACSSAAAIVALREMRKIAL IFNEDI+GQEL+K+YF+IIISEFDQSALTDK+R+RTSGDLQGLRLPQ+YTKSSI+KQRFVMKTSLSSEEK NVIKACYRQIFQRDISKAYGLNFKDLESQVKNG+LSIKEF+RC+GKSYIYRKQF+QPFVNSRV+ELAFRHFLGRGISSLEEF+KYFA+LSSRGLDGLIDNMINSTEYADYF EETVPYLRSLGEEAQEARNWG QI+LL YS+ FRKIPQFVTLF DYKSNLPDQHPYGLSNDPLLIQFGAIF KN +NLRKKSSPFGKDTRRILPRSGPGIYSQISSPNLRSK SG L  K F+LNPS            L+NNIEQVI+AVYLRVFGRF+YQ EQ+ IKKFEDLF+DRQISVR FISELTKS+VFRSLYWDNLYICKAIEYIHNRLIGRPTYGRQEINKYFDI+YKQGYY+MIDA++NS+EY+ETFG+NIVPYERYIT SE+A
Sbjct:   22 ISAIAQAEQQDRFLQLGELDQLVTFLNSGNKRLEVADILTKNANILVSKAADKIFVGGTPISYLERPQASFLSISKLNNQPNLQNLSGDIQNNLAGIVSSPFGTSDVLPAGFKPISILRYGPGRMKKSLRDLDWFLRYLTYAIVAGDPNILSVNIRGLRDLIDNACSSAAAIVALREMRKIALGIFNEDIQGQELVKKYFNIIISEFDQSALTDKLRKRTSGDLQGLRLPQVYTKSSIIKQRFVMKTSLSSEEKNNVIKACYRQIFQRDISKAYGLNFKDLESQVKNGTLSIKEFVRCLGKSYIYRKQFLQPFVNSRVIELAFRHFLGRGISSLEEFKKYFAILSSRGLDGLIDNMINSTEYADYFAEETVPYLRSLGEEAQEARNWGVQIELLNYSSVFRKIPQFVTLFGDYKSNLPDQHPYGLSNDPLLIQFGAIFVKNSINLRKKSSPFGKDTRRILPRSGPGIYSQISSPNLRSKTSGLLDVKIFKLNPSSNNENLQLNQVHLENNIEQVIRAVYLRVFGRFVYQFEQLTIKKFEDLFRDRQISVRMFISELTKSTVFRSLYWDNLYICKAIEYIHNRLIGRPTYGRQEINKYFDISYKQGYYQMIDAIINSVEYMETFGENIVPYERYITSSEIA 661          
BLAST of Gcaud2053.t1 vs. uniprot
Match: A0A2Z2JIX5_9FLOR (Phycobiliprotein ApcE n=2 Tax=Gracilariaceae TaxID=31469 RepID=A0A2Z2JIX5_9FLOR)

HSP 1 Score: 1106 bits (2861), Expect = 0.000e+0
Identity = 551/627 (87.88%), Postives = 593/627 (94.58%), Query Frame = 0
Query:    3 AIIQAEQQDRFLQLGELDELITFLNSGNKRLEVADILTKNANILVSKAADKIFVGGSPISYLERPQASFLAMDKLNNQINPQSLSGNIQNNLVGIVASTFNTSDSLPAGFKPISIVRYGTSRMKKSLRDLDWFLRYLTYAIVAGDPNILSVNIRGLRDLIDNACSSAAAIVALREMRKIALSIFNEDIKGQELLKEYFDIIISEFDQSALTDKIRRRTSGDLQGLRLPQIYTKSSILKQRFVMKTSLSSEEKGNVIKACYRQIFQRDISKAYGLNFKDLESQVKNGSLSIKEFIRCIGKSYIYRKQFVQPFVNSRVVELAFRHFLGRGISSLEEFQKYFAVLSSRGLDGLIDNMINSTEYADYFGEETVPYLRSLGEEAQEARNWGAQIDLLKYSTAFRKIPQFVTLFSDYKSNLPDQHPYGLSNDPLLIQFGAIFAKNRVNLRKKSSPFGKDTRRILPRSGPGIYSQISSPNLRSKVSGSLGPKTFQLNPSPLDNNIEQVIKAVYLRVFGRFIYQAEQVVIKKFEDLFKDRQISVREFISELTKSSVFRSLYWDNLYICKAIEYIHNRLIGRPTYGRQEINKYFDIAYKQGYYKMIDALMNSLEYIETFGDNIVPYERYITPSELA 629
            AIIQAEQQDRFLQLGEL++L+TFLNSGNKRLEVADILT+NA+ILVSKAADKIFVGGSPISYLERPQASFL+ D LNNQ+  QSLSGNIQNNL GIV+STFN SDSLPAGFKPIS++RYGTSRMKKSLRDLDWFLRYLTYAIVAGDPNILSVNIRGLRDLIDNACSSAAA VALREMRKIALSIFN D+ G+EL+K+YFDIIISEF+QS LTD+IRRRTSGDLQGLRLPQIYTKSSI+KQRFVMKTSLSSEEK  VIKACYRQIFQRDISKAYGL+F+DLESQVKNG+LSIKEF+RC+GKS IYRKQFV+ FVNSRVVELAFRHFLGRGISSLEEF++YFA+LSSRGLDG ID ++NS EYADYFGEETVPYLRSLGEEAQEARNWGAQIDLL YSTAF+KIPQFVTLFSDYKSNLPDQHPYGLSNDPLLIQFGAIF KN VNLRKKSSPFGKDTRRILP  GPGIYSQISSPN RSKVSG L PK FQLN   L++NIEQV++A+YLRVFGRFIYQAEQ V+KKFEDLFKDRQISVREF+ ELTKSS+FRSLYWDNLYICKAIEY+HNRLIGRPTYGRQEINKYFDI YKQGYYKMIDA+++S EY+ETFG NIVPYERYITPSELA
Sbjct:   24 AIIQAEQQDRFLQLGELNQLVTFLNSGNKRLEVADILTQNADILVSKAADKIFVGGSPISYLERPQASFLSTDTLNNQLKSQSLSGNIQNNLAGIVSSTFNASDSLPAGFKPISVIRYGTSRMKKSLRDLDWFLRYLTYAIVAGDPNILSVNIRGLRDLIDNACSSAAATVALREMRKIALSIFNNDVTGKELVKQYFDIIISEFEQSGLTDRIRRRTSGDLQGLRLPQIYTKSSIIKQRFVMKTSLSSEEKNIVIKACYRQIFQRDISKAYGLSFQDLESQVKNGTLSIKEFVRCLGKSSIYRKQFVESFVNSRVVELAFRHFLGRGISSLEEFKRYFAILSSRGLDGFIDTIVNSNEYADYFGEETVPYLRSLGEEAQEARNWGAQIDLLNYSTAFQKIPQFVTLFSDYKSNLPDQHPYGLSNDPLLIQFGAIFVKNSVNLRKKSSPFGKDTRRILPAIGPGIYSQISSPNSRSKVSGLLQPKVFQLNQVQLNDNIEQVVRAIYLRVFGRFIYQAEQTVVKKFEDLFKDRQISVREFVGELTKSSIFRSLYWDNLYICKAIEYVHNRLIGRPTYGRQEINKYFDIFYKQGYYKMIDAIISSPEYLETFGSNIVPYERYITPSELA 650          
BLAST of Gcaud2053.t1 vs. uniprot
Match: W8DXE9_9FLOR (Phycobiliprotein ApcE n=2 Tax=Gracilaria TaxID=2774 RepID=W8DXE9_9FLOR)

HSP 1 Score: 1103 bits (2854), Expect = 0.000e+0
Identity = 556/640 (86.88%), Postives = 596/640 (93.12%), Query Frame = 0
Query:    1 MSAIIQAEQQDRFLQLGELDELITFLNSGNKRLEVADILTKNANILVSKAADKIFVGGSPISYLERPQASFLAMDKLNNQINPQSLSGNIQNNLVGIVASTFNTSDSLPAGFKPISIVRYGTSRMKKSLRDLDWFLRYLTYAIVAGDPNILSVNIRGLRDLIDNACSSAAAIVALREMRKIALSIFNEDIKGQELLKEYFDIIISEFDQSALTDKIRRRTSGDLQGLRLPQIYTKSSILKQRFVMKTSLSSEEKGNVIKACYRQIFQRDISKAYGLNFKDLESQVKNGSLSIKEFIRCIGKSYIYRKQFVQPFVNSRVVELAFRHFLGRGISSLEEFQKYFAVLSSRGLDGLIDNMINSTEYADYFGEETVPYLRSLGEEAQEARNWGAQIDLLKYSTAFRKIPQFVTLFSDYKSNLPDQHPYGLSNDPLLIQFGAIFAKNRVNLRKKSSPFGKDTRRILPRSGPGIYSQISSPNLRSKVSGSLGPKTFQL-----------NPSPLDNNIEQVIKAVYLRVFGRFIYQAEQVVIKKFEDLFKDRQISVREFISELTKSSVFRSLYWDNLYICKAIEYIHNRLIGRPTYGRQEINKYFDIAYKQGYYKMIDALMNSLEYIETFGDNIVPYERYITPSELA 629
            MSAI QAEQQDRFLQ GELD+L+ FLNSGNKRLEVADILTKNANILVSKAADKIFVGGSPISYLERPQASFL+   LN+Q N Q+LSG+IQNNL  IV+S F+TSDSLPAGFKPISIVRYGT+RMKKSLRDLDWFLRYLTY+I+AGDPNILSVNIRGLRDLIDNACSSAAAIVALREMRKIALSIFNEDIK QEL+KEYF++IISEFDQSALTDK+R+RTS DLQGLRLPQ YTKSS +KQRFVMKTSLSSEEK NVIKACYRQIFQRDISKAYGLNFKDLESQVKNG+LSIKEF+RC+GKSY+YRKQFVQPFVNSRV+ELAFR+FLGRGISSLEEF+KYFAVLSSRGLDGLID+++N TEYADYF EETVPYLRSLGEEAQEARNWGAQI+LL YST FRKIPQFVTLFSDYKSNLPDQHPYGLSNDPLLIQFGAIFAKN VNLRKKSSPFGKDTRRILP+SGPGIYSQISSPNLRSKVS SLGPK FQL           N   L  NIEQVI+AVYLRVFGRF+YQ+EQ+ +KKFEDLF+D Q SVREFIS LTKS+VFRSLYWDNLYICK+IEYIHNRLIGRPTYGRQEINKYF+IAYKQGYYKMIDA+MNS EYIETFG+NIVPYERYITPSELA
Sbjct:   22 MSAISQAEQQDRFLQPGELDQLVAFLNSGNKRLEVADILTKNANILVSKAADKIFVGGSPISYLERPQASFLSASSLNSQSNLQNLSGDIQNNLAAIVSSPFSTSDSLPAGFKPISIVRYGTNRMKKSLRDLDWFLRYLTYSIIAGDPNILSVNIRGLRDLIDNACSSAAAIVALREMRKIALSIFNEDIKAQELVKEYFNVIISEFDQSALTDKLRKRTSSDLQGLRLPQTYTKSSFIKQRFVMKTSLSSEEKNNVIKACYRQIFQRDISKAYGLNFKDLESQVKNGTLSIKEFVRCLGKSYLYRKQFVQPFVNSRVIELAFRNFLGRGISSLEEFKKYFAVLSSRGLDGLIDSIVNGTEYADYFSEETVPYLRSLGEEAQEARNWGAQIELLNYSTVFRKIPQFVTLFSDYKSNLPDQHPYGLSNDPLLIQFGAIFAKNSVNLRKKSSPFGKDTRRILPKSGPGIYSQISSPNLRSKVSSSLGPKIFQLHISNNIDNLQVNQVQLKKNIEQVIRAVYLRVFGRFVYQSEQITLKKFEDLFRDSQTSVREFISTLTKSTVFRSLYWDNLYICKSIEYIHNRLIGRPTYGRQEINKYFNIAYKQGYYKMIDAMMNSPEYIETFGENIVPYERYITPSELA 661          
BLAST of Gcaud2053.t1 vs. uniprot
Match: Q6B8S8_GRATL (Phycobiliprotein ApcE n=2 Tax=Agarophyton TaxID=2510776 RepID=Q6B8S8_GRATL)

HSP 1 Score: 1085 bits (2805), Expect = 0.000e+0
Identity = 541/631 (85.74%), Postives = 595/631 (94.29%), Query Frame = 0
Query:    1 MSAIIQAEQQDRFLQLGELDELITFLNSGNKRLEVADILTKNANILVSKAADKIFVGGSPISYLERPQASFLAMDKLNNQINPQSLSGNIQNNLVGIVASTFNTSDSLPAGFKPISIVRYGTSRMKKSLRDLDWFLRYLTYAIVAGDPNILSVNIRGLRDLIDNACSSAAAIVALREMRKIALSIFNEDIKGQELLKEYFDIIISEFDQSALTDKIRRRTSGDLQGLRLPQIYTKSSILKQRFVMKTSLSSEEKGNVIKACYRQIFQRDISKAYGLNFKDLESQVKNGSLSIKEFIRCIGKSYIYRKQFVQPFVNSRVVELAFRHFLGRGISSLEEFQKYFAVLSSRGLDGLIDNMINSTEYADYFGEETVPYLRSLGEEAQEARNWGAQIDLLKYSTAFRKIPQFVTLFSDYKSNLPDQHPYGLSNDPLLIQFGAIFAKNRVNLRKKSSPFGKDTRRILPRSGPGIYSQISSPNLRSKVSGSLGPKTFQLNPSPLDNN--IEQVIKAVYLRVFGRFIYQAEQVVIKKFEDLFKDRQISVREFISELTKSSVFRSLYWDNLYICKAIEYIHNRLIGRPTYGRQEINKYFDIAYKQGYYKMIDALMNSLEYIETFGDNIVPYERYITPSELA 629
            +SAI+QAEQQDRFLQLGELD+L+TFL SGNKRLEVADILTKNAN+LVSKAADKIFVGGSP+SYLERPQASFL++++L+NQ   Q+LSG+IQNN  GIV+STF+TSDSLPAGFKPI+IVRYG +RMKKSLRDLDWFLRYLTYAIVAGDPNILSVNIRGLRDLIDNACSSAAAIVALREMRKIALSIFNED +GQEL+KEYFDIIISEFDQSALTDK+RRR+S DLQGLRLPQIY+++SILKQRFVMKT LSSEEK  VIKACYRQIFQRDISKAYGLNF DLESQVKNG+LS+KEFIR +GKSYIYRKQFVQPF NSRV+ELAFRHFLGRG+SSLEEF+KYF VLSSRGLDGLID ++NS EY+DYFGEETVPYLRSLGEEAQEA NWGAQIDLL YSTAFRKIPQF+TLFSDYK+ LPDQHPYGL NDPLLIQFGAIFAKNR+NLRKKSS FGKDTRRILPRSGP IYSQISSPNLRSK SGSLGPK FQLN S   +N  +E+V++A YLRVFGRFIY+AE++ +KKFEDLF++RQISVREF+S+LTKSSVFRSLYWDNLYICKAIEYIHNR+IGRPTYGRQEINKYFDI YKQGYYKMIDA++NS+EYIETFG+NIVPYERYITP ELA
Sbjct:   22 LSAIVQAEQQDRFLQLGELDQLVTFLKSGNKRLEVADILTKNANLLVSKAADKIFVGGSPVSYLERPQASFLSINQLSNQSGLQNLSGDIQNNFFGIVSSTFSTSDSLPAGFKPINIVRYGKNRMKKSLRDLDWFLRYLTYAIVAGDPNILSVNIRGLRDLIDNACSSAAAIVALREMRKIALSIFNEDSQGQELVKEYFDIIISEFDQSALTDKLRRRSSTDLQGLRLPQIYSQASILKQRFVMKTGLSSEEKNMVIKACYRQIFQRDISKAYGLNFTDLESQVKNGTLSLKEFIRYLGKSYIYRKQFVQPFTNSRVIELAFRHFLGRGLSSLEEFKKYFGVLSSRGLDGLIDRLLNSNEYSDYFGEETVPYLRSLGEEAQEACNWGAQIDLLNYSTAFRKIPQFITLFSDYKAKLPDQHPYGLGNDPLLIQFGAIFAKNRINLRKKSSLFGKDTRRILPRSGPAIYSQISSPNLRSKSSGSLGPKIFQLNLSNQKDNTELEKVVRATYLRVFGRFIYEAEEITVKKFEDLFRNRQISVREFVSKLTKSSVFRSLYWDNLYICKAIEYIHNRVIGRPTYGRQEINKYFDIVYKQGYYKMIDAMINSVEYIETFGNNIVPYERYITPYELA 652          
BLAST of Gcaud2053.t1 vs. uniprot
Match: A0A345U904_9FLOR (Phycobiliprotein ApcE n=1 Tax=Agarophyton vermiculophyllum TaxID=2608709 RepID=A0A345U904_9FLOR)

HSP 1 Score: 1060 bits (2741), Expect = 0.000e+0
Identity = 530/641 (82.68%), Postives = 590/641 (92.04%), Query Frame = 0
Query:    1 MSAIIQAEQQDRFLQLGELDELITFLNSGNKRLEVADILTKNANILVSKAADKIFVGGSPISYLERPQASFLAMDKLNNQINPQSLSGNIQNNLVGIVASTFNTSDSLPAGFKPISIVRYGTSRMKKSLRDLDWFLRYLTYAIVAGDPNILSVNIRGLRDLIDNACSSAAAIVALREMRKIALSIFNEDIKGQELLKEYFDIIISEFDQSALTDKIRRRTSGDLQGLRLPQIYTKSSILKQRFVMKTSLSSEEKGNVIKACYRQIFQRDISKAYGLNFKDLESQVKNGSLSIKEFIRCIGKSYIYRKQFVQPFVNSRVVELAFRHFLGRGISSLEEFQKYFAVLSSRGLDGLIDNMINSTEYADYFGEETVPYLRSLGEEAQEARNWGAQIDLLKYSTAFRKIPQFVTLFSDYKSNLPDQHPYGLSNDPLLIQFGAIFAKNRVNLRKKSSPFGKDTRRILPRSGPGIYSQISSPNLRSKVSGSLGPKTFQLNPS--------PLDNNIEQVIKAVYLRVFGRFIYQAEQVVIKKFEDLFKDRQISVREFISELTKSSVFRSLYWDNLYICKAIEYIHNRLIGRPTYGRQEINKYFDIAYKQGYYKMIDALMNSLEYIETFGDNIVPYERYITPSELANYSI 633
            +SAI+QAEQQDRFLQLGELD+LITFL SGNKRLEVA+ILTKNAN+LVSKA+DKIFVGGS ISYLERPQASFL+ D    Q   ++LSG++QNN + +V++ F+TSDSLPAGFKPI+IVRYGTSRMKKSLRDLDWFLRYLTYAIVAGDPNILSVNIRGLR+LIDNACSSAAAIVALREMRKIAL+IFNED++GQEL+KEYFD+II+EFD+SALTDK+RRR S DLQGLRLPQIY K+SI+KQRFVMKTSLSS EK +VIKACYRQIFQRDI+KAYG+NF+DLESQVKNG+LSIKEF+RC+GKSYIYRKQF+QPFVNSRV+ELAFRHFLGRG+SSLEEF+KYFA+LSSRGL+GL+D ++NS EYADYF EETVPYLR LGEEAQEARNWGAQI LL YSTAFRKIPQFVTLF+DYK+NLPDQHPYGLSNDPLLIQFGAIF KNRVNLRKKSS FGKDTRRILPRSGPGIYSQISSPNLRSK  GSLGPK FQLN S         L+NN EQVI+  YLRVFGR IYQ+EQV +KK E+LF+D+QISVREFI+ LTKSSVFRS+YWDNLYICKAIEYIHNRLIGRPTYGR+EINKYFDI YKQGYYKMIDA++NSLEYIETFGDNIVPYERY T +ELA  S+
Sbjct:   22 ISAIVQAEQQDRFLQLGELDQLITFLKSGNKRLEVANILTKNANLLVSKASDKIFVGGSAISYLERPQASFLSSD----QSGVKNLSGDVQNNFLAVVSAAFSTSDSLPAGFKPINIVRYGTSRMKKSLRDLDWFLRYLTYAIVAGDPNILSVNIRGLRELIDNACSSAAAIVALREMRKIALNIFNEDVQGQELVKEYFDVIITEFDRSALTDKLRRRDSTDLQGLRLPQIYNKASIVKQRFVMKTSLSSGEKDSVIKACYRQIFQRDIAKAYGINFRDLESQVKNGTLSIKEFVRCLGKSYIYRKQFLQPFVNSRVIELAFRHFLGRGVSSLEEFKKYFAILSSRGLEGLVDTILNSNEYADYFSEETVPYLRGLGEEAQEARNWGAQISLLNYSTAFRKIPQFVTLFADYKANLPDQHPYGLSNDPLLIQFGAIFVKNRVNLRKKSSFFGKDTRRILPRSGPGIYSQISSPNLRSKDLGSLGPKIFQLNLSNDTNINNPQLENNTEQVIRGSYLRVFGRLIYQSEQVTVKKIENLFRDKQISVREFITRLTKSSVFRSMYWDNLYICKAIEYIHNRLIGRPTYGRKEINKYFDIVYKQGYYKMIDAMVNSLEYIETFGDNIVPYERYTTSTELATRSL 658          
BLAST of Gcaud2053.t1 vs. uniprot
Match: UPI001D0FF0F0 (phycobilisome linker polypeptide n=1 Tax=Hydropuntia urvillei TaxID=2873519 RepID=UPI001D0FF0F0)

HSP 1 Score: 1054 bits (2725), Expect = 0.000e+0
Identity = 518/641 (80.81%), Postives = 583/641 (90.95%), Query Frame = 0
Query:    1 MSAIIQAEQQDRFLQLGELDELITFLNSGNKRLEVADILTKNANILVSKAADKIFVGGSPISYLERPQASFLAMDKLNNQINPQSLSGNIQNNLVGIVASTFNTSDSLPAGFKPISIVRYGTSRMKKSLRDLDWFLRYLTYAIVAGDPNILSVNIRGLRDLIDNACSSAAAIVALREMRKIALSIFNEDIKGQELLKEYFDIIISEFDQSALTDKIRRRTSGDLQGLRLPQIYTKSSILKQRFVMKTSLSSEEKGNVIKACYRQIFQRDISKAYGLNFKDLESQVKNGSLSIKEFIRCIGKSYIYRKQFVQPFVNSRVVELAFRHFLGRGISSLEEFQKYFAVLSSRGLDGLIDNMINSTEYADYFGEETVPYLRSLGEEAQEARNWGAQIDLLKYSTAFRKIPQFVTLFSDYKSNLPDQHPYGLSNDPLLIQFGAIFAKNRVNLRKKSSPFGKDTRRILPRSGPGIYSQISSPNLRSKVSGSLGPKTFQLNPSP-------------LDNNIEQVIKAVYLRVFGRFIYQAEQVVIKKFEDLFKDRQISVREFISELTKSSVFRSLYWDNLYICKAIEYIHNRLIGRPTYGRQEINKYFDIAYKQGYYKMIDALMNSLEYIETFGDNIVPYERYITPSEL 628
            +S+I+QAEQQDRFL+ GELD+L+ FLNSGNKRLEVAD+LTKNA ILVSKAADKIFVGGSPISYLERPQ +FL+ D ++NQ+NP +LSG+IQN+LVGIV+STF+++DSLPAGFKPI+IVRYGT+RMKKSLRDLDWFLRYLTYAI+AGDPNILSVNIRGLRDLIDNACSSA A+VALREMRK+AL+IFN+D +GQEL+KEYFD+++SEFDQS+LTDKIR+R SGDLQGLRLPQIY K+SI+KQRF MKTSLS+EEK  VIKACY+QIFQRDISKAYGLNFKDLESQVKNG+LSIKEF+R +GKS +Y KQFVQPFVNSRV+ELAFRHFLGRGISSL EF+KYF++LSSRG+DG IDN+INS EYADYFGEETVPYLRSLGEEAQEARNWG QIDL  YS+ FRKIPQFVTLFSDYKSNLPDQHPYGLSNDPLLIQFGAIF KNR+NLRKKSSPFG DTRRIL R GPGIYSQI +PNLRSK  GSLGPK F+L                 L NN++QVIK +YLRVFGRF+YQAEQV IKKFE+LFKD QISVR+FISEL KSS+FRSLYWDNLY+CKAIEY+H RLIGRPTYGR+EINKYFDIAYKQGYYKMID ++NSLEY E+FGDNIVPYERYIT SE+
Sbjct:   22 ISSIVQAEQQDRFLEPGELDQLVKFLNSGNKRLEVADVLTKNATILVSKAADKIFVGGSPISYLERPQTAFLSTDVVDNQVNPLNLSGDIQNDLVGIVSSTFSSNDSLPAGFKPINIVRYGTNRMKKSLRDLDWFLRYLTYAIIAGDPNILSVNIRGLRDLIDNACSSAVAVVALREMRKVALNIFNDDSQGQELVKEYFDVVVSEFDQSSLTDKIRKRVSGDLQGLRLPQIYNKASIIKQRFFMKTSLSAEEKNLVIKACYKQIFQRDISKAYGLNFKDLESQVKNGTLSIKEFMRYLGKSSVYYKQFVQPFVNSRVIELAFRHFLGRGISSLTEFKKYFSILSSRGIDGFIDNLINSAEYADYFGEETVPYLRSLGEEAQEARNWGVQIDLFNYSSVFRKIPQFVTLFSDYKSNLPDQHPYGLSNDPLLIQFGAIFVKNRINLRKKSSPFGNDTRRILTRIGPGIYSQIGNPNLRSKFPGSLGPKVFELKSFANETNDLISSKVDILSNNVDQVIKGIYLRVFGRFVYQAEQVTIKKFENLFKDGQISVRQFISELVKSSIFRSLYWDNLYVCKAIEYLHIRLIGRPTYGRKEINKYFDIAYKQGYYKMIDIMINSLEYTESFGDNIVPYERYITSSEV 662          
BLAST of Gcaud2053.t1 vs. uniprot
Match: A0A1C9CET5_9FLOR (Phycobiliprotein ApcE n=6 Tax=Gracilariopsis TaxID=2781 RepID=A0A1C9CET5_9FLOR)

HSP 1 Score: 1038 bits (2684), Expect = 0.000e+0
Identity = 521/641 (81.28%), Postives = 580/641 (90.48%), Query Frame = 0
Query:    1 MSAIIQAEQQDRFLQLGELDELITFLNSGNKRLEVADILTKNANILVSKAADKIFVGGSPISYLERPQASFLAMDKLNNQINPQSLSGNIQNNLVGIVASTFNTSDSLPAGFKPISIVRYGTSRMKKSLRDLDWFLRYLTYAIVAGDPNILSVNIRGLRDLIDNACSSAAAIVALREMRKIALSIFNEDIKGQELLKEYFDIIISEFDQSALTDKIRRRTSGDLQGLRLPQIYTKSSILKQRFVMKTSLSSEEKGNVIKACYRQIFQRDISKAYGLNFKDLESQVKNGSLSIKEFIRCIGKSYIYRKQFVQPFVNSRVVELAFRHFLGRGISSLEEFQKYFAVLSSRGLDGLIDNMINSTEYADYFGEETVPYLRSLGEEAQEARNWGAQIDLLKYSTAFRKIPQFVTLFSDYKSNLPDQHPYGLSNDPLLIQFGAIFAKNRVNLRKKSSPFGKDTRRILPRSGPGIYSQISSPNLRSKVSGSLGPKTFQL-----------NPSPLDNNIEQVIKAVYLRVFGRFIYQAEQVVIKKFEDLFKDRQISVREFISELTKSSVFRSLYWDNLYICKAIEYIHNRLIGRPTYGRQEINKYFDIAYKQGYYKMIDALMNSLEYIETFGDNIVPYERYITPSELAN 630
            +SAI+QAEQQDRFLQLGEL++LITFLNSG KRLE+ADILTKNANILVSKAADKIFVGGS ISYLERPQAS L  ++  NQIN Q+LSG++Q+  +  + +TF+ SDSLPAGFKPI+IVRYGT RMKKSLRDLDWFLRYLTYAI+AGDPNIL VNIRGL+DLIDNACSSAAA+VALREMRKIALSIF EDI+GQEL+KEYFD+IISEFD SALTDKIR+RTSGDLQGLRLPQIY+K+++ KQRFVMKTSLS++EK +VIKACYRQ+FQRDISKAYG+NFKDLESQVKNG+LSIKEFIR IGKS IY +QF QPFVNSRVVELAFRHFLGRGISSLEEF+KYFAVLSSRGLDGLID++IN+TEYADYFGEETVPYLRSLGEE QEARNWG QIDLL YST FRKIPQF+TLFSDYK+NLPDQH YGLSNDPL IQFGAIF +NRVNL KKSSPFGKD RRILP+ GPGIYSQISSPNLRSK SGSLGPK F+L           +     +NIEQ+IKAVYLRVFGRFIY+ EQ+ I KFE+LFKDRQISVREF+ +L KSSVFR+LYWDNLYICKAIEYIHNRLIGRPTYGRQEINKYF+I YKQ YYKMID+++NS EYIETFGDNIVPYERY+TP+ LA+
Sbjct:   22 ISAIVQAEQQDRFLQLGELNQLITFLNSGKKRLEIADILTKNANILVSKAADKIFVGGSAISYLERPQASLLFTNQSENQINVQNLSGDLQSGFISTLKATFSVSDSLPAGFKPINIVRYGTVRMKKSLRDLDWFLRYLTYAIIAGDPNILLVNIRGLKDLIDNACSSAAAVVALREMRKIALSIFIEDIEGQELVKEYFDVIISEFDASALTDKIRKRTSGDLQGLRLPQIYSKAAVSKQRFVMKTSLSTDEKNSVIKACYRQVFQRDISKAYGVNFKDLESQVKNGTLSIKEFIRYIGKSSIYNQQFFQPFVNSRVVELAFRHFLGRGISSLEEFKKYFAVLSSRGLDGLIDSIINNTEYADYFGEETVPYLRSLGEEPQEARNWGVQIDLLNYSTPFRKIPQFITLFSDYKANLPDQHAYGLSNDPLSIQFGAIFKQNRVNLCKKSSPFGKDVRRILPKIGPGIYSQISSPNLRSKSSGSLGPKIFELQAIDDTGNLESDQIQTKSNIEQIIKAVYLRVFGRFIYKEEQLTINKFENLFKDRQISVREFVIQLAKSSVFRALYWDNLYICKAIEYIHNRLIGRPTYGRQEINKYFNIVYKQSYYKMIDSMINSPEYIETFGDNIVPYERYVTPTSLAS 662          
BLAST of Gcaud2053.t1 vs. uniprot
Match: A0A345U8E8_9FLOR (Phycobiliprotein ApcE n=2 Tax=Gracilariaceae TaxID=31469 RepID=A0A345U8E8_9FLOR)

HSP 1 Score: 1024 bits (2647), Expect = 0.000e+0
Identity = 507/640 (79.22%), Postives = 578/640 (90.31%), Query Frame = 0
Query:    1 MSAIIQAEQQDRFLQLGELDELITFLNSGNKRLEVADILTKNANILVSKAADKIFVGGSPISYLERPQASFLAMDKLNNQINPQSLSGNIQNNLVGIVASTFNTSDSLPAGFKPISIVRYGTSRMKKSLRDLDWFLRYLTYAIVAGDPNILSVNIRGLRDLIDNACSSAAAIVALREMRKIALSIFNEDIKGQELLKEYFDIIISEFDQSALTDKIRRRTSGDLQGLRLPQIYTKSSILKQRFVMKTSLSSEEKGNVIKACYRQIFQRDISKAYGLNFKDLESQVKNGSLSIKEFIRCIGKSYIYRKQFVQPFVNSRVVELAFRHFLGRGISSLEEFQKYFAVLSSRGLDGLIDNMINSTEYADYFGEETVPYLRSLGEEAQEARNWGAQIDLLKYSTAFRKIPQFVTLFSDYKSNLPDQHPYGLSNDPLLIQFGAIFAKNRVNLRKKSSPFGKDTRRILPRSGPGIYSQISSPNLRSKVSGSLGPKTFQLNPSP------------LDNNIEQVIKAVYLRVFGRFIYQAEQVVIKKFEDLFKDRQISVREFISELTKSSVFRSLYWDNLYICKAIEYIHNRLIGRPTYGRQEINKYFDIAYKQGYYKMIDALMNSLEYIETFGDNIVPYERYITPSEL 628
            +S+IIQAEQQDRFLQLGELD+L+TFLNSGNKRLEVADILTKNA ILVS+AADKIFVGGSPISYLERPQ S L  D +N+Q+N  +LSG++Q +L GI++STF+ +D+LPAGFKPI+I RYG +RMKKSLRDLDWFLRYLTYAIVAGDPNILSVNIRGLRDLIDNACSSA AIVALREMRK+ALSIFN D +GQEL+++YF+I++SEF+Q ALTDKIRRR S DLQGLRLPQIY K+SI KQRF MKTSLSSEEK   IKACYRQIFQRDISKAYG+NFKDLESQVKNGSLSIKEF+R +GKS +Y +QFVQPFVNSRVVELAFR+FLGRGISSLEEF+KYF+VLSSRGL+GL+D++INS EYADYFGEETVPYLR+LGEEAQEARNWG Q+DL  YS+ FRKIPQF+TLFSDYK+NLPDQHPYGLSNDPLLIQFGAIFAKNRVNLRKKSSPFGKDTRRIL RSGPGIYSQI SPNLRSK+ GSLGP+ F+LN S             ++NNI+QV++A+YLRVFGRFIY+ EQ+ + KFE+LF+D QISVR+F++EL KSS+FRSLYWDNLYICK+IEYIH RLIGRPTY R+EIN+YFDIAYKQGYY MID ++NS EYIE+FGD+IVPYERYIT SEL
Sbjct:   22 ISSIIQAEQQDRFLQLGELDQLVTFLNSGNKRLEVADILTKNATILVSRAADKIFVGGSPISYLERPQVSSLVADSINSQLNVSNLSGDVQIDLAGIISSTFSANDALPAGFKPINIGRYGINRMKKSLRDLDWFLRYLTYAIVAGDPNILSVNIRGLRDLIDNACSSAVAIVALREMRKVALSIFNSDNEGQELVQKYFNIVVSEFEQPALTDKIRRRLSSDLQGLRLPQIYNKASITKQRFFMKTSLSSEEKNLAIKACYRQIFQRDISKAYGINFKDLESQVKNGSLSIKEFVRYLGKSSVYYQQFVQPFVNSRVVELAFRNFLGRGISSLEEFKKYFSVLSSRGLNGLVDDLINSNEYADYFGEETVPYLRTLGEEAQEARNWGTQLDLFNYSSVFRKIPQFITLFSDYKANLPDQHPYGLSNDPLLIQFGAIFAKNRVNLRKKSSPFGKDTRRILSRSGPGIYSQIGSPNLRSKLPGSLGPQVFKLNMSSRINNSVSSQTNLVNNNIDQVVRAIYLRVFGRFIYKFEQIAVNKFENLFRDGQISVRKFVTELVKSSIFRSLYWDNLYICKSIEYIHIRLIGRPTYSRKEINQYFDIAYKQGYYDMIDVMVNSSEYIESFGDSIVPYERYITSSEL 661          
The following BLAST results are available for this feature:
BLAST of Gcaud2053.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A345U6N6_9FLOR0.000e+099.84Phycobiliprotein ApcE n=7 Tax=Gracilariaceae TaxID... [more]
A0A345U791_9FLOR0.000e+090.14Phycobiliprotein ApcE n=13 Tax=Gracilaria TaxID=27... [more]
A0A345U7U5_GRAGA0.000e+087.03Phycobiliprotein ApcE n=2 Tax=Gracilaria TaxID=277... [more]
A0A2Z2JIX5_9FLOR0.000e+087.88Phycobiliprotein ApcE n=2 Tax=Gracilariaceae TaxID... [more]
W8DXE9_9FLOR0.000e+086.88Phycobiliprotein ApcE n=2 Tax=Gracilaria TaxID=277... [more]
Q6B8S8_GRATL0.000e+085.74Phycobiliprotein ApcE n=2 Tax=Agarophyton TaxID=25... [more]
A0A345U904_9FLOR0.000e+082.68Phycobiliprotein ApcE n=1 Tax=Agarophyton vermicul... [more]
UPI001D0FF0F00.000e+080.81phycobilisome linker polypeptide n=1 Tax=Hydropunt... [more]
A0A1C9CET5_9FLOR0.000e+081.28Phycobiliprotein ApcE n=6 Tax=Gracilariopsis TaxID... [more]
A0A345U8E8_9FLOR0.000e+079.22Phycobiliprotein ApcE n=2 Tax=Gracilariaceae TaxID... [more]

Pages

back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR038719Phycobilisome, alpha/beta subunit superfamilyGENE3D1.10.490.20Phycocyaninscoord: 639..799
e-value: 7.2E-57
score: 193.9
IPR038719Phycobilisome, alpha/beta subunit superfamilyGENE3D1.10.490.20Phycocyaninscoord: 1..207
e-value: 3.3E-53
score: 181.9
IPR038255Phycobilisome linker domain superfamilyGENE3D1.10.3130.20Phycobilisome linker domaincoord: 242..387
e-value: 8.2E-45
score: 153.9
IPR038255Phycobilisome linker domain superfamilyGENE3D1.10.3130.20Phycobilisome linker domaincoord: 497..622
e-value: 1.9E-36
score: 126.8
IPR001297Phycobilisome linker domainPFAMPF00427PBS_linker_polycoord: 498..621
e-value: 6.7E-35
score: 119.8
coord: 250..375
e-value: 1.1E-41
score: 141.8
IPR001297Phycobilisome linker domainPROSITEPS51445PBS_LINKERcoord: 469..651
score: 28.472919
IPR001297Phycobilisome linker domainPROSITEPS51445PBS_LINKERcoord: 223..403
score: 27.813385
IPR012128Phycobilisome, alpha/beta subunitPFAMPF00502Phycobilisomecoord: 645..798
e-value: 2.1E-55
score: 187.0
coord: 120..206
e-value: 6.6E-14
score: 52.2
coord: 3..55
e-value: 4.1E-8
score: 33.4
NoneNo IPR availablePANTHERPTHR34011:SF6PHYCOBILIPROTEIN APCEcoord: 641..689
NoneNo IPR availablePANTHERPTHR34011:SF6PHYCOBILIPROTEIN APCEcoord: 553..613
NoneNo IPR availablePANTHERPTHR34011PHYCOBILISOME 32.1 KDA LINKER POLYPEPTIDE, PHYCOCYANIN-ASSOCIATED, ROD 2-RELATEDcoord: 553..613
NoneNo IPR availablePANTHERPTHR34011:SF6PHYCOBILIPROTEIN APCEcoord: 2..385
NoneNo IPR availablePANTHERPTHR34011PHYCOBILISOME 32.1 KDA LINKER POLYPEPTIDE, PHYCOCYANIN-ASSOCIATED, ROD 2-RELATEDcoord: 2..385
coord: 641..689
NoneNo IPR availableCDDcd12125APC_alphacoord: 640..798
e-value: 6.22331E-90
score: 278.012
IPR009050Globin-like superfamilySUPERFAMILY46458Globin-likecoord: 640..798
IPR009050Globin-like superfamilySUPERFAMILY46458Globin-likecoord: 2..207

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NODE_2400_length_5803_cov_214.791842contigNODE_2400_length_5803_cov_214.791842:242..3457 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria caudata M_176_S67 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gcaud2053.t1Gcaud2053.t1Gracilaria caudata M_176_S67 malemRNANODE_2400_length_5803_cov_214.791842 242..3457 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gcaud2053.t1 ID=Gcaud2053.t1|Name=Gcaud2053.t1|organism=Gracilaria caudata M_176_S67 male|type=polypeptide|length=800bp
MSAIIQAEQQDRFLQLGELDELITFLNSGNKRLEVADILTKNANILVSKA
ADKIFVGGSPISYLERPQASFLAMDKLNNQINPQSLSGNIQNNLVGIVAS
TFNTSDSLPAGFKPISIVRYGTSRMKKSLRDLDWFLRYLTYAIVAGDPNI
LSVNIRGLRDLIDNACSSAAAIVALREMRKIALSIFNEDIKGQELLKEYF
DIIISEFDQSALTDKIRRRTSGDLQGLRLPQIYTKSSILKQRFVMKTSLS
SEEKGNVIKACYRQIFQRDISKAYGLNFKDLESQVKNGSLSIKEFIRCIG
KSYIYRKQFVQPFVNSRVVELAFRHFLGRGISSLEEFQKYFAVLSSRGLD
GLIDNMINSTEYADYFGEETVPYLRSLGEEAQEARNWGAQIDLLKYSTAF
RKIPQFVTLFSDYKSNLPDQHPYGLSNDPLLIQFGAIFAKNRVNLRKKSS
PFGKDTRRILPRSGPGIYSQISSPNLRSKVSGSLGPKTFQLNPSPLDNNI
EQVIKAVYLRVFGRFIYQAEQVVIKKFEDLFKDRQISVREFISELTKSSV
FRSLYWDNLYICKAIEYIHNRLIGRPTYGRQEINKYFDIAYKQGYYKMID
ALMNSLEYIETFGDNIVPYERYITPSELANYSIIGVLLMSIITKSIVNAD
AEARYLSPGELDRIKSFVLSGQRRLRIAQILTDNRELIVKQGGQQLFQKR
PDVVSPGGNAYGEEMTATCLRDLDYYLRLVTYGIVAGDVTPIEEIGLVGV
KEMYNSLGTPISGVAEGVRSMKNVACSLLSGEDSAEAGFYFDYTLGAMQ*
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR038719Phycobilisome_asu/bsu_sf
IPR038255PBS_linker_sf
IPR001297PBS_linker_dom
IPR012128Phycobilisome_asu/bsu
IPR009050Globin-like_sf