Gcaud2995.t1 (polypeptide) Gracilaria caudata M_176_S67 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGcaud2995.t1
Unique NameGcaud2995.t1
Typepolypeptide
OrganismGracilaria caudata M_176_S67 male (Gracilaria caudata M_176_S67 male)
Sequence length302
Homology
BLAST of Gcaud2995.t1 vs. uniprot
Match: A0A2V3ITI7_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3ITI7_9FLOR)

HSP 1 Score: 250 bits (639), Expect = 1.350e-78
Identity = 167/322 (51.86%), Postives = 214/322 (66.46%), Query Frame = 0
Query:    1 MESTHPLLHPASPDPSRPIADESPP--FPFQNTQNIGQIWTELASITVSAFTPQLISRLRTFISHTPCFELDNHLQMLGAIVVRHVTLCLSDPDRQTAPLSRIQS-QPVLSRPQTHAKRRSYRDLAYHAVRINRIVPQSQPLQVEPTSSSPSSSTTN-IPRRLSIQKASSLIDVAQTRPST--------TIRGCQTSSASTKENDNI-----AINQPSQLSTFPSHT---NQSVALREETFNSRSPNRAQVFPRADVTTSIESASMRKVTSPTSRQKVVAQPQNLSEYANRFKNDSRTA-APISRLVQMRKQRAEKKRHNLK 301
            M++ H  +   +P      A +S P  +P Q+  NIGQIWTELA+ITV AFTPQLI+RLR FIS TPCF+LD HLQMLG IVVRH+ L L++PD+   P S  +S +  +SR  +  KRRSYRD+AYHAVRINRIVP S PL+   +SSS ++  TN +PRRLSIQKA SL  + +    +        T+   +T+ A+ +          A N+P + +  P      N+SVALREET  +R+ NRA  FPRADVTT IE  S    T+ ++R +VVAQPQNLSEYA+R +NDS +A APISRLVQMRKQRAE+KR N+K
Sbjct:    1 MDANHVSMDAPNPPNFSATAQQSHPSNYPCQHP-NIGQIWTELATITVQAFTPQLITRLRAFISKTPCFDLDTHLQMLGPIVVRHIALTLAEPDQCLNPPSTARSSRSSISRSNSRTKRRSYRDIAYHAVRINRIVPHSIPLESHRSSSSAAAPVTNSLPRRLSIQKAPSLSTIQRRASKSAPDKENQPTVTTARTAHAAAQPAXXXSAHATARNEPPEGACKPKALDLCNRSVALREETCWTRTQNRAHHFPRADVTTRIEPVS----TAKSARPRVVAQPQNLSEYASRLRNDSHSAVAPISRLVQMRKQRAERKRQNVK 317          
BLAST of Gcaud2995.t1 vs. uniprot
Match: R7QEK4_CHOCR (Uncharacterized protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QEK4_CHOCR)

HSP 1 Score: 80.5 bits (197), Expect = 1.110e-13
Identity = 98/336 (29.17%), Postives = 142/336 (42.26%), Query Frame = 0
Query:   10 PASPDPSRPIADESPPFPFQNTQNIGQIWTELASITVSAFTPQLISRLRTFISHTPCFELDNHLQMLGAIVVRHVTLCLSDPD----------------------------RQTAPLSRIQSQPVLSRPQTHAKRR--SYRDLAYHAVRINRIVPQSQPLQVEPTSSSPSSSTTNIPRRLSIQKASSLIDVAQTRPSTTIRGCQTSSASTKENDNIAINQPSQLSTFPSHTNQSVALREETFNSR--SPNRAQVFPRADVTTSIESASMRKVTSPTSRQKVVAQPQNL--SEYANRFKNDSRTA---------------APISRLVQMRKQRAEKK 296
            P+S  P  P A+ +  FP        +   ELAS+TV  F+P ++S +R          +  HL +LG + VRHV L + + D                             +   L R++S P L+R      +R  SYRD+AY+AVR  RI+P++ P   E TS++ ++ T  + RRLSI+      D A                  ++  +IAI +P   ST P     + ++ +E F  R  SP   +  P  +      S S     +P       ++P +L   E  NR  N S T                APISRLVQMRKQR EKK
Sbjct:    2 PSSSSPPAP-ANSTMAFPLPPPSPTAEACAELASLTVRVFSPAVVSSIRDIFVRNERLNVKEHLPLLGTLAVRHVALMMQEDDFNPDIRDKGEDESPQSPVLVKHESRIKNERMVDLDRMRSTPPLTRRLHREGKRTSSYRDIAYYAVRQKRIIPEALPTGREETSTATTAETRPV-RRLSIRSIRLPKDSAL-----------------RKTRSIAIIEPK--STPPDGKEDAKSI-DENFTKRRHSPEFWKEKPGKENIHVRPSVSSPSAGAPAGGSLSSSRPPSLFNKESRNRRPNLSNTPGKSAQGTQGKISGRNAPISRLVQMRKQRLEKK 315          
The following BLAST results are available for this feature:
BLAST of Gcaud2995.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A2V3ITI7_9FLOR1.350e-7851.86Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
R7QEK4_CHOCR1.110e-1329.17Uncharacterized protein n=1 Tax=Chondrus crispus T... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 135..158
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..26

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NODE_222_length_35706_cov_4.342356contigNODE_222_length_35706_cov_4.342356:10366..11271 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria caudata M_176_S67 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gcaud2995.t1Gcaud2995.t1Gracilaria caudata M_176_S67 malemRNANODE_222_length_35706_cov_4.342356 10366..11271 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gcaud2995.t1 ID=Gcaud2995.t1|Name=Gcaud2995.t1|organism=Gracilaria caudata M_176_S67 male|type=polypeptide|length=302bp
MESTHPLLHPASPDPSRPIADESPPFPFQNTQNIGQIWTELASITVSAFT
PQLISRLRTFISHTPCFELDNHLQMLGAIVVRHVTLCLSDPDRQTAPLSR
IQSQPVLSRPQTHAKRRSYRDLAYHAVRINRIVPQSQPLQVEPTSSSPSS
STTNIPRRLSIQKASSLIDVAQTRPSTTIRGCQTSSASTKENDNIAINQP
SQLSTFPSHTNQSVALREETFNSRSPNRAQVFPRADVTTSIESASMRKVT
SPTSRQKVVAQPQNLSEYANRFKNDSRTAAPISRLVQMRKQRAEKKRHNL
K*
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