Gcaud7804.t1 (polypeptide) Gracilaria caudata M_176_S67 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGcaud7804.t1
Unique NameGcaud7804.t1
Typepolypeptide
OrganismGracilaria caudata M_176_S67 male (Gracilaria caudata M_176_S67 male)
Sequence length239
Homology
BLAST of Gcaud7804.t1 vs. uniprot
Match: R7QLB9_CHOCR (Fatty acid hydroxylase domain-containing protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QLB9_CHOCR)

HSP 1 Score: 178 bits (452), Expect = 1.090e-51
Identity = 96/167 (57.49%), Postives = 115/167 (68.86%), Query Frame = 0
Query:   49 PSVITSWLALCALAPLLHEVPFYLGHRFILHSPRGVARFGHALHHSAKAHCAISAMYMYSFDFLLEIVLPYVVPLVVLRHARMLSEAHASWLLALGSLGGLYEHSGYNFVPNVWSFDTRIHGMHHVYYSCSFADGVGAPSLLDHALHTACGSVGAPALAARKLITWL 215
            PS + S LA  ALAPLLHEVPFYL HRFILHS  G     HALHHS+  H A+SAMYM   DFLLEIV+PY+VPL VL    + + A    +L +G+ GGLYEHSGYNF   + + DT++H MHH +Y+CSFADGVGAPS+LD  + TAC   G P  A R+   WL
Sbjct:   96 PSTLPSVLAFVALAPLLHEVPFYLSHRFILHSSWGFRSLNHALHHSSVTHSALSAMYMSGPDFLLEIVVPYLVPLSVLSKYNLCNTATCIAILPVGAFGGLYEHSGYNFFEGIAALDTKVHAMHHRFYNCSFADGVGAPSVLDPMMGTACTG-GPPIKAIRR---WL 258          
BLAST of Gcaud7804.t1 vs. uniprot
Match: M2X262_GALSU (Fatty acid hydroxylase n=1 Tax=Galdieria sulphuraria TaxID=130081 RepID=M2X262_GALSU)

HSP 1 Score: 145 bits (366), Expect = 3.070e-39
Identity = 90/214 (42.06%), Postives = 121/214 (56.54%), Query Frame = 0
Query:   16 YHAACLFFHMLDRRKLLQRHKAFRSSPELPTSE--PSVITSWLALCALAPLL------------------------------HEVPFYLGHRFILHSPRGVARFGHALHHSAKAHCAISAMYMYSFDFLLEIVLPYVVPLVVLRHARMLSEAHASWLLALGSLGGLYEHSGYNFVPNVWSFDTRIHGMHHVYYSCSFADGVGAPSLLDHALHTA 197
            +H  C+   + D  +LLQR+K  R   +    E  P V+ + L L   A LL                              H++ FYLGHRF+LHS  G    GH LHHS KA  AIS+MYM   D++LEI++PY+VP++ LR + M  +A A     LG++GGLYEHSGYNF P   +  T  H MHHV Y+CS++DGVG+ +L+D+ALHTA
Sbjct:   25 FHIGCILLSLCDHFQLLQRYKFQRFQNDESYFELLPRVLFNQLFLLLPAMLLFQYFGLGFQTTEALYSPVVYFVYSLWMALGHDILFYLGHRFLLHSKWGFMHLGHDLHHSTKATIAISSMYMGVIDYILEIIVPYLVPMLFLR-SDMFFDALAP---CLGAIGGLYEHSGYNFFPYFETLSTVAHTMHHVRYNCSYSDGVGSTNLMDNALHTA 234          
BLAST of Gcaud7804.t1 vs. uniprot
Match: A0A7J7ILE0_9RHOD (Fatty acid hydroxylase domain-containing protein n=1 Tax=Cyanidiococcus yangmingshanensis TaxID=2690220 RepID=A0A7J7ILE0_9RHOD)

HSP 1 Score: 138 bits (347), Expect = 2.370e-36
Identity = 77/174 (44.25%), Postives = 104/174 (59.77%), Query Frame = 0
Query:   23 FHMLDRRKLLQRHKAFRSSPELPTSEPSVITSWLALCALAPLLHEVPFYLGHRFILHSPRGVARFGHALHHSAKAHCAISAMYMYSFDFLLEIVLPYVVPLVVLRHARMLSEAHASWLLALGSLGGLYEHSGYNFVPNVWSFDTRIHGMHHVYYSCSFADGVGAPSLLDHALHT 196
            F  LDR+    RH  +   P+          +W+ +       H++ FYLGHRF+LHS  G   F H +HHS KA  A+S+MYM S D+LLEI +PY+VPL +L+       A   + +ALGSLGG+YEHSGYNF P +    T  HGMHH  Y+CSF+DGVG+ +++D    T
Sbjct:   89 FDSLDRQNQPLRHSVWEYIPQ---------AAWMTIG------HDLFFYLGHRFLLHSAWGYHFFRHDVHHSTKASIALSSMYMASSDYLLEICVPYLVPLCLLKA----DAAFHFFAIALGSLGGMYEHSGYNFWPRLPGLSTMAHGMHHTRYNCSFSDGVGSSNIMDGLFRT 243          
BLAST of Gcaud7804.t1 vs. uniprot
Match: A0A7S1EU23_9RHOD (Hypothetical protein n=1 Tax=Timspurckia oligopyrenoides TaxID=708627 RepID=A0A7S1EU23_9RHOD)

HSP 1 Score: 129 bits (324), Expect = 8.130e-34
Identity = 65/133 (48.87%), Postives = 93/133 (69.92%), Query Frame = 0
Query:   66 HEVPFYLGHRFILHSPRGVARFGHALHHSAKAHCAISAMYMYSFDFLLEIVLPYVVPLVVLRHARMLSEAHASWLL-ALGSLGGLYEHSGYNFVPNVWSFDTRIHGMHHVYYSCSFADGVGAPSLLDHALHTA 197
            H++ FYLGHRFILH+  G+  F H +HH AKA  AISA+YM+  DF LE+VLP+++P  ++ +   LS ++ + L+  + +LGG YEHSG+NF PNV   DTR+H  HH  ++ SF+DGVG+ +L+D    TA
Sbjct:   28 HDIIFYLGHRFILHTSWGIPIFRHDIHHRAKASSAISALYMHPLDFFLEVVLPFLIPFALVSN---LSSSYLNILMPGIAALGGCYEHSGFNFWPNVTGLDTRLHISHHARWNVSFSDGVGSANLMDSMFGTA 157          
BLAST of Gcaud7804.t1 vs. uniprot
Match: M1VDG1_CYAM1 (Fatty acid hydroxylase domain-containing protein n=1 Tax=Cyanidioschyzon merolae (strain 10D) TaxID=280699 RepID=M1VDG1_CYAM1)

HSP 1 Score: 131 bits (329), Expect = 1.350e-33
Identity = 68/131 (51.91%), Postives = 86/131 (65.65%), Query Frame = 0
Query:   66 HEVPFYLGHRFILHSPRGVARFGHALHHSAKAHCAISAMYMYSFDFLLEIVLPYVVPLVVLRHARMLSEAHASWLLALGSLGGLYEHSGYNFVPNVWSFDTRIHGMHHVYYSCSFADGVGAPSLLDHALHT 196
            H++ FYLGHRF+LHS  G     H LHHS KA  A+S+MYM   D++LEI +PY+VPL +L+       A     +ALGSLGG+YEHSGYNF P      T  HGMHH  Y+CSF+DGVG+ +L+D    T
Sbjct:  117 HDIFFYLGHRFLLHSSWGYQLLQHDLHHSTKASIALSSMYMAPSDYVLEICVPYLVPLCMLKA----DAAFHFVAIALGSLGGMYEHSGYNFCPYFPGLSTMAHGMHHTRYNCSFSDGVGSSNLMDGLFRT 243          
BLAST of Gcaud7804.t1 vs. uniprot
Match: A0A5J4YY04_PORPP (Fatty acid hydroxylase domain-containing protein n=1 Tax=Porphyridium purpureum TaxID=35688 RepID=A0A5J4YY04_PORPP)

HSP 1 Score: 127 bits (320), Expect = 3.120e-32
Identity = 69/150 (46.00%), Postives = 100/150 (66.67%), Query Frame = 0
Query:   50 SVITSWLALCAL--APLLHEVPFYLGHRFILHSPRGVARFGHALHHSAKAHCAISAMYMYSFDFLLEIVLPYVVPLVVLRHARMLSEAHASWLLALGSLGGLYEHSGYNFVPNVWSFDTRIHGMHHVYYSCSFADGVGAPSLLDHALHTA 197
            S+ T W    AL    L H+V FY+GHR+ILH+  G+  F H +HHS KA  A+SA++M+ FDF +EIVLPY+VP V++  A + +     ++  LG +GG YEHSG+NF P++   DTR H  HH+ +S S++DGVG+ +L+D  + TA
Sbjct:  116 SLSTLWRVPIALFGMSLGHDVVFYIGHRYILHTHWGLPIFRHDVHHSTKAADAVSALFMHPFDFFVEIVLPYLVPYVLI--APLSTSLLDVFIPVLGVVGGTYEHSGFNFWPDITVLDTRFHAAHHIKWSVSYSDGVGSTNLMDALMDTA 263          
BLAST of Gcaud7804.t1 vs. uniprot
Match: A0A7S3EBK8_9RHOD (Hypothetical protein n=2 Tax=Rhodosorus marinus TaxID=101924 RepID=A0A7S3EBK8_9RHOD)

HSP 1 Score: 120 bits (302), Expect = 1.380e-29
Identity = 80/231 (34.63%), Postives = 121/231 (52.38%), Query Frame = 0
Query:    5 GLLAWTQFMLTYHAACLFFHMLDRRKLLQRHKAFRSSPE------------------LPT------------------SEPSVITSWLALCALAPLLHEVPFYLGHRFILHSPRGVARFGHALHHSAKAHCAISAMYMYSFDFLLEIVLPYVVPLVVLRHARMLSEAHASWLL---ALGSLGGLYEHSGYNFVPNVWSFDTRIHGMHHVYYSCSFADGVGAPSLLDHALHT 196
             L AW   M T+H+ C    + D++K L + +   +  +                  LPT                  S P+++ ++LA+     + H+V FYLGHR++LHS  G   FGH +HHS  A+CA+SA YM + DF  EI+LPY++P+  +       ++ A++ L   A+G++GGLYEHSGY F PN+    T+ H +HH     SFADG G+P ++D A  T
Sbjct:   32 ALTAWLLMMFTFHSLCGTLEICDQKKWLVQFRRKPAGDKKTYKEMMPRILINQICLMLPTMIMAERLGLCFQNKQLLISVPNLVYNFLAM----GIGHDVIFYLGHRYLLHSKWGYKLFGHDVHHSTGANCALSAFYMANVDFCFEILLPYLLPMWFMG-----PDSCATFSLMAPAIGAVGGLYEHSGYEFFPNLSVASTKSHFLHHNLGFVSFADGFGSPGIMDWAFGT 253          
BLAST of Gcaud7804.t1 vs. uniprot
Match: A0A1I3XRY6_9HYPH (Sterol desaturase/sphingolipid hydroxylase, fatty acid hydroxylase superfamily n=2 Tax=Methylocapsa palsarum TaxID=1612308 RepID=A0A1I3XRY6_9HYPH)

HSP 1 Score: 103 bits (257), Expect = 4.360e-23
Identity = 79/238 (33.19%), Postives = 111/238 (46.64%), Query Frame = 0
Query:    6 LLAWTQFMLTYHAACLFFHMLDRRKLLQRHKA--------------------FRSSPELP---------TSEPSV-ITSWLALCALAPLLHEVPFYLGHRFILHSPRGVARFGHALHHSAKAHCAISAMYMYSFDFLLEIVLPYVVPLVVLRHARMLSEAHASWLLALGSLGGLYEHSGYNF--------------VPNVWSF---DTRIHGMHHVYYSCSFADGVGAPSLLDHALHT 196
            LLA+   ML YH A L F   DR K+L+  K                     F   P +          T  P + +  +LA  AL  + H++  Y+ HRF+LH    + + GH++HHS  A   +SA YM   DF LEIVLPY++PL ++        A    + +LG+LGGLYEHSGY+F              +   W F    ++ HG HH   + SF+DG G+P + D    T
Sbjct:   18 LLAFAVQMLVYHGAGLLFEYWDRTKMLRAFKVRDVDRLGYRELLPRVLFNQFFILLPSMGAVQYFGLAFTGAPHMGLVHFLAAMALMGVGHDIVQYIFHRFVLHRAGLIRKLGHSVHHSTGASKGVSACYMSPADFFLEIVLPYLIPLALVGAGA--DVAFHLIVASLGALGGLYEHSGYDFAAKAPKERAPGLKGLATAWFFAAITSKAHGEHHRRSNVSFSDGFGSPGICDTIFET 253          
BLAST of Gcaud7804.t1 vs. uniprot
Match: A0A522GJM8_9HYPH (Fatty acid hydroxylase family protein n=1 Tax=Beijerinckiaceae bacterium TaxID=1978229 RepID=A0A522GJM8_9HYPH)

HSP 1 Score: 101 bits (252), Expect = 2.280e-22
Identity = 82/235 (34.89%), Postives = 112/235 (47.66%), Query Frame = 0
Query:    5 GLLAWTQFMLTYHAACLFFHMLDRRKLLQRHKAFRSS--------PELPTSEPSVIT------SWLALCA-----LAPLL-----------HEVPFYLGHRFILHSPRGVARFGHALHHSAKAHCAISAMYMYSFDFLLEIVLPYVVPLVVLRHARMLSEAHASWLLA-LGSLGGLYEHSGYNF------------VPNVWSF-----DTRIHGMHHVYYSCSFADGVGAPSLLD 191
             +L W   M  YH     F + DR   LQ  K  R          P++ T++  V+        W  L       L+PL            H+V  Y+ HR ILH P+ +   GHALHHS  A  +ISA YM S DF LEI LPY+VPLV++      S+    +++A LG+ GGLYEHSGY+F            VP + +       +R H  HH  ++ SF+DG G+P + D
Sbjct:   19 SVLTWAVMMAVYHGIGFGFELCDRNHWLQNSKVRRLDRLSYAAMLPKVLTNQVFVLLPCMVFLQWTGLAFTGVTHLSPLRFIVSLIVMGIGHDVVQYVAHRGILHRPKLMKLLGHALHHSTGASRSISACYMSSPDFFLEIALPYLVPLVLVGGGG--SDILFQFVVAGLGAFGGLYEHSGYDFAAPLRQSRLFKAVPLLGTLIEGLVTSRAHAEHHRRFNVSFSDGFGSPGICD 251          
BLAST of Gcaud7804.t1 vs. uniprot
Match: UPI000A01E598 (sterol desaturase family protein n=1 Tax=Methylocapsa aurea TaxID=663610 RepID=UPI000A01E598)

HSP 1 Score: 100 bits (250), Expect = 2.840e-22
Identity = 61/155 (39.35%), Postives = 87/155 (56.13%), Query Frame = 0
Query:   66 HEVPFYLGHRFILHSPRGVARFGHALHHSAKAHCAISAMYMYSFDFLLEIVLPYVVPLVVL-RHARMLSEAHASWLLALGSLGGLYEHSGYNFV--------PNVW---------SFDTRIHGMHHVYYSCSFADGVGAPSLLDHALHTACGSVG 202
            H++  Y+ HRFILH P  +   GH+LHHS  A   +SA YM S DF LEIVLPY++PL+++   A +L     +   +LG++GGLYEHSGY+F          ++W         +  ++ HG HH   + SF+DG G+P + D    T    VG
Sbjct:   84 HDIVQYIAHRFILHRPGLIRTLGHSLHHSTGASKGVSACYMSSADFFLEIVLPYLIPLILVGAGADVLFHVVVA---SLGAIGGLYEHSGYDFALALPRAPSTSIWRRPLAFLAAAVTSKAHGEHHRRSNVSFSDGFGSPGICDAIFATRWDMVG 235          
The following BLAST results are available for this feature:
BLAST of Gcaud7804.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
R7QLB9_CHOCR1.090e-5157.49Fatty acid hydroxylase domain-containing protein n... [more]
M2X262_GALSU3.070e-3942.06Fatty acid hydroxylase n=1 Tax=Galdieria sulphurar... [more]
A0A7J7ILE0_9RHOD2.370e-3644.25Fatty acid hydroxylase domain-containing protein n... [more]
A0A7S1EU23_9RHOD8.130e-3448.87Hypothetical protein n=1 Tax=Timspurckia oligopyre... [more]
M1VDG1_CYAM11.350e-3351.91Fatty acid hydroxylase domain-containing protein n... [more]
A0A5J4YY04_PORPP3.120e-3246.00Fatty acid hydroxylase domain-containing protein n... [more]
A0A7S3EBK8_9RHOD1.380e-2934.63Hypothetical protein n=2 Tax=Rhodosorus marinus Ta... [more]
A0A1I3XRY6_9HYPH4.360e-2333.19Sterol desaturase/sphingolipid hydroxylase, fatty ... [more]
A0A522GJM8_9HYPH2.280e-2234.89Fatty acid hydroxylase family protein n=1 Tax=Beij... [more]
UPI000A01E5982.840e-2239.35sterol desaturase family protein n=1 Tax=Methyloca... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR006694Fatty acid hydroxylasePFAMPF04116FA_hydroxylasecoord: 61..182
e-value: 9.7E-13
score: 48.6
NoneNo IPR availablePANTHERPTHR11863:SF26FATTY ACID HYDROXYLASE DOMAIN-CONTAINING PROTEIN 2coord: 11..182
NoneNo IPR availablePANTHERPTHR11863STEROL DESATURASEcoord: 11..182
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 127..238
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 27..46
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 104..126
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 67..103
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 6..26
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..5
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 47..66
NoneNo IPR availableTMHMMTMhelixcoord: 4..26
NoneNo IPR availableTMHMMTMhelixcoord: 104..126

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NODE_213_length_36751_cov_4.280933contigNODE_213_length_36751_cov_4.280933:3248..4063 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria caudata M_176_S67 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gcaud7804.t1Gcaud7804.t1Gracilaria caudata M_176_S67 malemRNANODE_213_length_36751_cov_4.280933 3248..4063 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gcaud7804.t1 ID=Gcaud7804.t1|Name=Gcaud7804.t1|organism=Gracilaria caudata M_176_S67 male|type=polypeptide|length=239bp
MMTPGLLAWTQFMLTYHAACLFFHMLDRRKLLQRHKAFRSSPELPTSEPS
VITSWLALCALAPLLHEVPFYLGHRFILHSPRGVARFGHALHHSAKAHCA
ISAMYMYSFDFLLEIVLPYVVPLVVLRHARMLSEAHASWLLALGSLGGLY
EHSGYNFVPNVWSFDTRIHGMHHVYYSCSFADGVGAPSLLDHALHTACGS
VGAPALAARKLITWLSPSHSHSTSAVVTQPLSAEDKTK*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR006694Fatty_acid_hydroxylase