Gcaud7815.t1 (polypeptide) Gracilaria caudata M_176_S67 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGcaud7815.t1
Unique NameGcaud7815.t1
Typepolypeptide
OrganismGracilaria caudata M_176_S67 male (Gracilaria caudata M_176_S67 male)
Sequence length487
Homology
BLAST of Gcaud7815.t1 vs. uniprot
Match: A0A2V3INN3_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3INN3_9FLOR)

HSP 1 Score: 484 bits (1246), Expect = 5.230e-165
Identity = 286/498 (57.43%), Postives = 357/498 (71.69%), Query Frame = 0
Query:    1 MAGGRRPSSYVSGARHSSGIDRQSVQ------EAHVSPPLVSTTGPSLPPWIPSIWQPAPMQSPTPRVVREKQTTVDPSSVLAAALDTAVQSXXXXXXXXXXXXXXXXXXXXXXXXXSENGTEDESSQPLTQRENELLDLVVALKSRLQQRDDDIASLQNRMDSLEQHLRLNQTAAHTHQQQFESTTSNLAKQISDATSHLENRFEARFAAVKDQLKSTQESVHRLGSHDS----DIAHLTSRSRQLTSDLFKFRTHVSTELEKYASKMRQYEQTSKAISDRLASIVADTSSSTPDVEQLRRSVEAATESLATVRSKVKRVEVQVSEVSKQAEDSVALSSAFEEGIRAGLDDITKTVSSLHCTVREIKKNLPPNSDD-TGSTNTSCSELTSKVDALETNLKQFKRLIESNLRNQLSAEGIVKEQVSLITKHVCVAMRQYTARRISENNALIDKALRARIPEYAKNDGQFVLVREEDLEGNES-VGIHRSSHEPTRAQS 486
            MAGGRRPSSYVSG RHSS +DRQ+VQ      +   +PPL S+ GPSLPPWIPSIWQP P++SPT R  R+K  ++DPSS LAAALDTAVQS                         SENG EDE+SQPLTQRENELLDL+VALKSRL QRDDDIASL NRM++LE  L+     A    + F +  + L K  SD+ + L+   E R   V+D ++ST  SV +L + +S    +I  L  R+R+L+S + + RTH+  E E+ A ++ Q     +A ++RL S+ +D SS+ PDVE LRRSVEAA+E +ATVRSK+KRVE QVS+V+++AE+S+ALS AFE+ +  GL+ I  +VSSL  TV+EIK+ +P  + D T ++ TS  EL +KVDALETNLK  KRLIES+LR +L AE IVKEQVSLITKHVCVAMRQYTARRISENNALID+ALRARIPEYA+ND QFVLVREEDLEGN+S VGIHRS+H  ++A S
Sbjct:    1 MAGGRRPSSYVSGVRHSSAVDRQTVQAVPATQDGFSTPPLSSSNGPSLPPWIPSIWQPPPLRSPTQRPSRDKPASLDPSSALAAALDTAVQSAVVRALGSATIASQLTSSSCD----SENGLEDETSQPLTQRENELLDLIVALKSRLHQRDDDIASLNNRMEALEHKLQQQHNVAQVRHENFTTDKAALTKHFSDSFAELDKSVEVRLTTVRDHVRSTNASVSKLRNANSVAEANITALNRRTRELSSQVTQLRTHMKAEFERQAVRVNQLGDHVRASAERLNSLASDVSSA-PDVEHLRRSVEAASEDVATVRSKLKRVETQVSDVTRKAEESIALSGAFEQSVGEGLNQIRASVSSLAGTVKEIKETVPSMATDATITSQTSNHELVAKVDALETNLKALKRLIESSLRTRLHAESIVKEQVSLITKHVCVAMRQYTARRISENNALIDRALRARIPEYAQNDDQFVLVREEDLEGNDSTVGIHRSTHIASKAGS 493          
BLAST of Gcaud7815.t1 vs. uniprot
Match: R7QG72_CHOCR (Uncharacterized protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QG72_CHOCR)

HSP 1 Score: 150 bits (379), Expect = 4.230e-40
Identity = 75/103 (72.82%), Postives = 89/103 (86.41%), Query Frame = 0
Query:  376 SELTSKVDALETNLKQFKRLIESNLRNQLSAEGIVKEQVSLITKHVCVAMRQYTARRISENNALIDKALRARIPEYAKNDGQFVLVREEDLEGNESVGIHRSS 478
            S++ S+++ +E N+   K+LIESNLR Q +AE IVKEQVSLITKHVCVAMRQYT RRISENNALID+ LRAR+PEYAKN+GQFVLVREED +GNES+ I RSS
Sbjct:   26 SDVFSRLERVECNVNSLKKLIESNLRTQWNAESIVKEQVSLITKHVCVAMRQYTTRRISENNALIDQTLRARVPEYAKNEGQFVLVREEDTDGNESIDIQRSS 128          
BLAST of Gcaud7815.t1 vs. uniprot
Match: A0A7S0ZGL3_9RHOD (Hypothetical protein n=1 Tax=Timspurckia oligopyrenoides TaxID=708627 RepID=A0A7S0ZGL3_9RHOD)

HSP 1 Score: 95.9 bits (237), Expect = 2.570e-17
Identity = 81/310 (26.13%), Postives = 141/310 (45.48%), Query Frame = 0
Query:  212 STQESVHRLG----SHDSDIAHLTSRSRQLTSDLFKFRTHVSTELEKYASKMRQYEQTSK---AISDRLASI----------VADTSSSTPDVEQLRRSVEAATESLATVRSKVKRVEVQVSEVSKQAEDSVALSSAFEEGIRAGLDDITKTVSSLHCTV--REIKKNLPPNSDDTGSTNTSCSELTSKVDALETNLKQF------------------------------------------KRLIESNLRNQLSAEGIVKEQVSLITKHVCVAMRQYTARRISENNALIDKALRARIPEYAKNDGQFVL 460
            +TQ S+ R G    + +  + +   R  +L  +  + RT ++ + +K +    ++E   K   ++S +L S+          VA TS  +  +  +  S++++ +  A ++++++ +  +      Q E +V       E +++ L D+  T  ++   V   ++         D G      S L  KV++++++LKQ                                           K+L+E NLR Q SAE  VK Q S+ITKHVC+AMR++TAR+I ENN  ID ALR R P+YAK+D   VL
Sbjct:  326 TTQYSLERSGVRSPNSEKVLLYTQKRIERLEFENIQLRTALALQEDKTSKDASRFENLEKLVVSLSMKLESVEQKQSESKRNVAQTSELSECMNSMNCSIQSSEKKTALIQNEIEHLREEFESKIVQVESNVKSILEMTEELKSSLADVVLTPEAIVEPVVDSDVLHRKQHEKRDAGKVEADLSTLNRKVESMQSSLKQLNLKMKQLTSKYDSQIDEIEENSVIRDSAVEKMREQLEQMGRLKKLVEQNLRLQSSAEETVKNQASMITKHVCIAMREFTARKIMENNEFIDSALRQRCPDYAKSDSCCVL 635          
The following BLAST results are available for this feature:
BLAST of Gcaud7815.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
A0A2V3INN3_9FLOR5.230e-16557.43Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
R7QG72_CHOCR4.230e-4072.82Uncharacterized protein n=1 Tax=Chondrus crispus T... [more]
A0A7S0ZGL3_9RHOD2.570e-1726.13Hypothetical protein n=1 Tax=Timspurckia oligopyre... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 135..169
NoneNo IPR availableCOILSCoilCoilcoord: 287..307
NoneNo IPR availableCOILSCoilCoilcoord: 375..402
NoneNo IPR availableCOILSCoilCoilcoord: 252..272
NoneNo IPR availableGENE3D1.10.287.950coord: 248..399
e-value: 5.8E-7
score: 30.7
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..71
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 11..36
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 94..128
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 97..128
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 37..54
NoneNo IPR availableSUPERFAMILY57997Tropomyosincoord: 114..312

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NODE_213_length_36751_cov_4.280933contigNODE_213_length_36751_cov_4.280933:26079..27539 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria caudata M_176_S67 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gcaud7815.t1Gcaud7815.t1Gracilaria caudata M_176_S67 malemRNANODE_213_length_36751_cov_4.280933 26079..27539 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gcaud7815.t1 ID=Gcaud7815.t1|Name=Gcaud7815.t1|organism=Gracilaria caudata M_176_S67 male|type=polypeptide|length=487bp
MAGGRRPSSYVSGARHSSGIDRQSVQEAHVSPPLVSTTGPSLPPWIPSIW
QPAPMQSPTPRVVREKQTTVDPSSVLAAALDTAVQSAVERALGAAPPAAT
STSQLTASSSNSENGTEDESSQPLTQRENELLDLVVALKSRLQQRDDDIA
SLQNRMDSLEQHLRLNQTAAHTHQQQFESTTSNLAKQISDATSHLENRFE
ARFAAVKDQLKSTQESVHRLGSHDSDIAHLTSRSRQLTSDLFKFRTHVST
ELEKYASKMRQYEQTSKAISDRLASIVADTSSSTPDVEQLRRSVEAATES
LATVRSKVKRVEVQVSEVSKQAEDSVALSSAFEEGIRAGLDDITKTVSSL
HCTVREIKKNLPPNSDDTGSTNTSCSELTSKVDALETNLKQFKRLIESNL
RNQLSAEGIVKEQVSLITKHVCVAMRQYTARRISENNALIDKALRARIPE
YAKNDGQFVLVREEDLEGNESVGIHRSSHEPTRAQS*
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