Gcaud1916.t1 (polypeptide) Gracilaria caudata M_176_S67 male
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Overview
Homology
BLAST of Gcaud1916.t1 vs. uniprot
Match: A0A2V3IDW3_9FLOR (Translocon-associated protein subunit gamma n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IDW3_9FLOR) HSP 1 Score: 237 bits (605), Expect = 3.200e-77 Identity = 126/170 (74.12%), Postives = 145/170 (85.29%), Query Frame = 0
Query: 22 DDFDGLLEDFGRRPSVGRRLLYVFFAVEAVAAAALFFVRVFLIDVNASPVTLAVSVLLSVVILSMSYHNLAFAQAARIRRTASPPTKGAFKGQLDRFEKAKARFESRISSAALWYSCAYNNALFMIVAPFLGLYMLSDKLSGDLNLLVSAAAAASLALFNSKSALKAIGE 191
DD + L +DFGR+PS+ RRLLYVFFA+E VA +FFVRVFLID ++S VTL+++ +S +LS SYHNLAFA A+RIRRTASPPTKGAFKG +D+F AK RFE RIS+AALWYSCAYNNALFMI+ PFL YML+DKLSGDLNLLVS AAAASLALFNSKSALKAIGE
Sbjct: 4 DDIELLADDFGRKPSLLRRLLYVFFALEVVAVCTVFFVRVFLIDTSSSLVTLSIAAFISAAVLSASYHNLAFAHASRIRRTASPPTKGAFKGNMDQFGAAKLRFERRISNAALWYSCAYNNALFMILTPFLATYMLADKLSGDLNLLVSGAAAASLALFNSKSALKAIGE 173
BLAST of Gcaud1916.t1 vs. uniprot
Match: R7QPN5_CHOCR (Uncharacterized protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QPN5_CHOCR) HSP 1 Score: 220 bits (561), Expect = 1.530e-70 Identity = 113/170 (66.47%), Postives = 141/170 (82.94%), Query Frame = 0
Query: 22 DDFDGLLEDFGRRPSVGRRLLYVFFAVEAVAAAALFFVRVFLIDVNASPVTLAVSVLLSVVILSMSYHNLAFAQAARIRRTASPPTKGAFKGQLDRFEKAKARFESRISSAALWYSCAYNNALFMIVAPFLGLYMLSDKLSGDLNLLVSAAAAASLALFNSKSALKAIGE 191
D+FD LL+DFGRRPSV +RL Y+ ++E V A+ FVR+FL+ ++AS VTL +SVLL+ V+LS+SYHNLAFA+AAR+RR SPPTKGA+KG +EKA A FE ISSA+LWYSCAYNNA+FMIV P LG+Y+L DK++GDLNLL+S AAAA+LALFNS +ALKAIGE
Sbjct: 3 DEFDDLLDDFGRRPSVLKRLFYILLSLEPVLVTAILFVRIFLVSISASQVTLVLSVLLAAVLLSLSYHNLAFAKAARLRRAGSPPTKGAYKGDKAAYEKAMASFEGSISSASLWYSCAYNNAIFMIVTPLLGMYLLPDKVAGDLNLLLSGAAAAALALFNSNTALKAIGE 172
BLAST of Gcaud1916.t1 vs. uniprot
Match: A0A1X6PAP8_PORUM (Translocon-associated protein subunit gamma n=1 Tax=Porphyra umbilicalis TaxID=2786 RepID=A0A1X6PAP8_PORUM) HSP 1 Score: 123 bits (309), Expect = 2.380e-32 Identity = 74/170 (43.53%), Postives = 101/170 (59.41%), Query Frame = 0
Query: 22 DDFDGLLEDFGRRPSVGRRLLYVFFAVEAVAAAALFFVRVFLIDVNASPVTLAVSVLLSVVILSMSYHNLAFAQAARIRRTASPPTKGAFKGQLDRFEKAKARFESRISSAALWYSCAYNNALFMIVAPFLGLYMLSDKLSGDLNLLVSAAAAASLALFNSKSALKAIGE 191
+D D LL DFGR +R+ Y A A L F RVF +DV+ + +TL ++ +LS +YHNLAF + R+R + PPTK + KG R A A E+ + AA+ YS YNNALF+ A F+G Y++ K+ G++N VS AAA ALFNS+SALK IG+
Sbjct: 5 EDIDTLLTDFGRTAPPAKRVAYAAAAAVPAALPILLFSRVFSVDVSRAIITLVIAGAAVAAVLSAAYHNLAFTTSVRLRGRSVPPTKASVKGDKARHTAALASHEAALERAAVAYSLFYNNALFVAGALFVGFYVVGTKVPGEVNYAVSGLAAAGFALFNSRSALKNIGQ 174
BLAST of Gcaud1916.t1 vs. uniprot
Match: A0A5J4YZ22_PORPP (Translocon-associated protein subunit gamma n=1 Tax=Porphyridium purpureum TaxID=35688 RepID=A0A5J4YZ22_PORPP) HSP 1 Score: 110 bits (276), Expect = 2.310e-27 Identity = 65/172 (37.79%), Postives = 104/172 (60.47%), Query Frame = 0
Query: 15 VAMANENDDFDGLLEDFGRRPSVGRRLLYVFFAVEAVAAAALFFVRVFLIDVNASPVTLAVSVLLSVVILSMSYHNLAFAQAARIRRTASPPTKGAFKGQLDRFEKAKARFESRISSAALWYSCAYNNALFMI-VAPFLGLYMLSDKLSGDLNLLVSAAAAASLALFNSKSA 185
+A E+D+F G D+GR VG+RL+Y A+ + L +VRV +D+ AS V + +V+++ V+LS++YHN AFA++ ++R+ PP K AF+ + + +KA E+ I +A+ YS YNNA+F++ + PF G LS + +N + AA LAL NS+SA
Sbjct: 1 MARKAEDDEFAGFEVDYGRTAGVGKRLMYWLLAILPINLPVLLYVRVLALDLQASGVLVGATVIIASVMLSLAYHNCAFAKSVKLRKGLEPPPKSAFRNRPEEHKKACDDLEANIRKSAVLYSVGYNNAIFLVCILPF-GFQFLSSLMETPMNFATAYTFAALLALVNSRSA 171 The following BLAST results are available for this feature:
BLAST of Gcaud1916.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90) Total hits: 4
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
Alignments
The following features are aligned
Analyses
This polypeptide is derived from or has results from the following analyses
Relationships
This polypeptide derives from the following mRNA feature(s):
Sequences
The following sequences are available for this feature:
polypeptide sequence >Gcaud1916.t1 ID=Gcaud1916.t1|Name=Gcaud1916.t1|organism=Gracilaria caudata M_176_S67 male|type=polypeptide|length=192bpback to top Annotated Terms
The following terms have been associated with this polypeptide:
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