Gcaud3757.t1 (polypeptide) Gracilaria caudata M_176_S67 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGcaud3757.t1
Unique NameGcaud3757.t1
Typepolypeptide
OrganismGracilaria caudata M_176_S67 male (Gracilaria caudata M_176_S67 male)
Sequence length145
Homology
[Close]
BLAST of Gcaud3757.t1 vs. uniprot
Match: A0A2V3IK70_9FLOR (Nucleoside diphosphate kinase n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IK70_9FLOR)

HSP 1 Score: 277 bits (708), Expect = 5.280e-94
Identity = 132/144 (91.67%), Postives = 140/144 (97.22%), Query Frame = 0 
Query:    1 MLKPDAVQRGLVGDIIARFERRGFKLVALKLVTPSLDMAKKHYYDLAERPFFPALCRFLSSGPVVAMVFEGEDVIRQGRRMIGATSPLAADPGTIRGDLAIITGKNIIHGSDSKESAEAEIALWFTPQEINSWSKTDVEAWVYE 144
            MLKPDAVQRGLVG+I+ RFE+RGFKLVALKLVTPSL+MA+KHYYDLAERPFFP LC+FLSSGPVVAMVFEGEDVIRQGRRMIGATSPLAADPGTIRGDLAIITGKNIIHGSDSKESAEAEIALWF P+E+NSW KTDVEAWVYE
Sbjct:   11 MLKPDAVQRGLVGEIVQRFEKRGFKLVALKLVTPSLEMAQKHYYDLAERPFFPTLCKFLSSGPVVAMVFEGEDVIRQGRRMIGATSPLAADPGTIRGDLAIITGKNIIHGSDSKESAEAEIALWFKPEELNSWKKTDVEAWVYE 154
[Close]
BLAST of Gcaud3757.t1 vs. uniprot
Match: A0A4Y7J9U8_PAPSO (Nucleoside diphosphate kinase n=2 Tax=Papaver somniferum TaxID=3469 RepID=A0A4Y7J9U8_PAPSO)

HSP 1 Score: 202 bits (513), Expect = 4.620e-64
Identity = 92/142 (64.79%), Postives = 118/142 (83.10%), Query Frame = 0 
Query:    2 LKPDAVQRGLVGDIIARFERRGFKLVALKLVTPSLDMAKKHYYDLAERPFFPALCRFLSSGPVVAMVFEGEDVIRQGRRMIGATSPLAADPGTIRGDLAIITGKNIIHGSDSKESAEAEIALWFTPQEINSWSKTDVEAWVY 143
            +KPD VQRGL+ +I+ARFER+GFKLVA+KLV PS D A+KHY+DL ERPFF  LC FLSSGPV+AMV+EGE VI+ GR++IGAT P  ++PGTIRGDLA++ G+NIIHGSD  E+A+ EI LWF P+E+N+++  + E WVY
Sbjct:   27 IKPDGVQRGLISEIVARFERKGFKLVAIKLVVPSKDFAQKHYHDLKERPFFNGLCDFLSSGPVLAMVWEGEGVIKYGRKLIGATDPQKSEPGTIRGDLAVVVGRNIIHGSDGPETAKDEIKLWFKPEELNTYT-INSEKWVY 167
[Close]
BLAST of Gcaud3757.t1 vs. uniprot
Match: A0A2V3IH97_9FLOR (Nucleoside diphosphate kinase n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IH97_9FLOR)

HSP 1 Score: 200 bits (508), Expect = 1.110e-63
Identity = 97/144 (67.36%), Postives = 115/144 (79.86%), Query Frame = 0 
Query:    1 MLKPDAVQRGLVGDIIARFERRGFKLVALKLVTPSLDMAKKHYYDLAERPFFPALCRFLSSGPVVAMVFEGEDVIRQGRRMIGATSPLAADPGTIRGDLAIITGKNIIHGSDSKESAEAEIALWFTPQEINSWSKTDVEAWVYE 144
            M+KPD VQRGLV +II RFERRG++LVA+KLV PS  +A++HY DL ER FFP L  FLSS PVVAMV+ GED++ QGR MIGAT+PL + PGTIRGDLAI+TGKNIIHGSDS ESAE EIALWF   E+ ++ K   E W+YE
Sbjct:    1 MIKPDGVQRGLVSEIIGRFERRGYRLVAMKLVQPSKQLAEQHYDDLRERSFFPVLTDFLSSSPVVAMVWSGEDIVVQGRAMIGATNPLKSAPGTIRGDLAIVTGKNIIHGSDSVESAEKEIALWFNDDELCTYEKC-TETWIYE 143
[Close]
BLAST of Gcaud3757.t1 vs. uniprot
Match: A0A2Z7BDK9_9LAMI (Nucleoside diphosphate kinase n=1 Tax=Dorcoceras hygrometricum TaxID=472368 RepID=A0A2Z7BDK9_9LAMI)

HSP 1 Score: 202 bits (514), Expect = 1.180e-63
Identity = 90/142 (63.38%), Postives = 119/142 (83.80%), Query Frame = 0 
Query:    2 LKPDAVQRGLVGDIIARFERRGFKLVALKLVTPSLDMAKKHYYDLAERPFFPALCRFLSSGPVVAMVFEGEDVIRQGRRMIGATSPLAADPGTIRGDLAIITGKNIIHGSDSKESAEAEIALWFTPQEINSWSKTDVEAWVY 143
            +KPD VQRGL+ +II+RFER+GFKLV +K++ PS D AKKHY+DLAERPFF  LC FLSSGPV+AMV+EGE VI+ GR++IGAT P  ++PGTIRGDLA++ G+NIIHGSD  E+A+ EI+LWF P+E+ S++ ++ E W+Y
Sbjct:   67 IKPDGVQRGLISEIISRFERKGFKLVGIKVIVPSKDFAKKHYHDLAERPFFDGLCDFLSSGPVIAMVWEGEGVIKYGRKLIGATDPQKSEPGTIRGDLAVVVGRNIIHGSDGPETAKDEISLWFKPEELVSYA-SNAEKWIY 207
[Close]
BLAST of Gcaud3757.t1 vs. uniprot
Match: A0A5P1EWS8_ASPOF (Nucleoside diphosphate kinase n=2 Tax=Asparagus officinalis TaxID=4686 RepID=A0A5P1EWS8_ASPOF)

HSP 1 Score: 203 bits (516), Expect = 1.370e-63
Identity = 93/142 (65.49%), Postives = 118/142 (83.10%), Query Frame = 0 
Query:    2 LKPDAVQRGLVGDIIARFERRGFKLVALKLVTPSLDMAKKHYYDLAERPFFPALCRFLSSGPVVAMVFEGEDVIRQGRRMIGATSPLAADPGTIRGDLAIITGKNIIHGSDSKESAEAEIALWFTPQEINSWSKTDVEAWVY 143
            +KPD VQRGL+ DI++RFER+GFKLVA+KLV PS D A+KHY+DL ERPFF  LC FLSSGPV+AMV+EGE VI+ GR++IGAT P  ++PGTIRGDLA++ G+NIIHGSD  E+A+ EIALWF P E+ S++ ++ E WVY
Sbjct:   94 IKPDGVQRGLIADIVSRFERKGFKLVAIKLVVPSKDFAQKHYHDLKERPFFNGLCDFLSSGPVLAMVWEGEGVIKYGRKLIGATDPQKSEPGTIRGDLAVVVGRNIIHGSDGPETAQDEIALWFEPSELVSYT-SNAEKWVY 234
[Close]
BLAST of Gcaud3757.t1 vs. uniprot
Match: A0A2J6JNP4_LACSA (Nucleoside diphosphate kinase n=2 Tax=Lactuca sativa TaxID=4236 RepID=A0A2J6JNP4_LACSA)

HSP 1 Score: 203 bits (516), Expect = 1.410e-63
Identity = 93/142 (65.49%), Postives = 117/142 (82.39%), Query Frame = 0 
Query:    2 LKPDAVQRGLVGDIIARFERRGFKLVALKLVTPSLDMAKKHYYDLAERPFFPALCRFLSSGPVVAMVFEGEDVIRQGRRMIGATSPLAADPGTIRGDLAIITGKNIIHGSDSKESAEAEIALWFTPQEINSWSKTDVEAWVY 143
            +KPD VQRGL+ +IIARFER+GFKLVA+KLVTPS   A+KHY+DL ERPFF  LC FLSSGPV+AMV+EGE VI+ GR++IGAT P  ++PGTIRGDLA++ G+NIIHGSD  E+A+ EI LWF P+E++S++    E WVY
Sbjct:   95 IKPDGVQRGLISEIIARFERKGFKLVAIKLVTPSKSFAQKHYHDLKERPFFDGLCNFLSSGPVLAMVWEGEGVIKYGRKLIGATDPQKSEPGTIRGDLAVVVGRNIIHGSDGPETAKDEINLWFKPEEVSSYTSNQ-EKWVY 235
[Close]
BLAST of Gcaud3757.t1 vs. uniprot
Match: A0A6S7MF22_LACSI (Nucleoside diphosphate kinase n=1 Tax=Lactuca saligna TaxID=75948 RepID=A0A6S7MF22_LACSI)

HSP 1 Score: 203 bits (516), Expect = 1.410e-63
Identity = 93/142 (65.49%), Postives = 117/142 (82.39%), Query Frame = 0 
Query:    2 LKPDAVQRGLVGDIIARFERRGFKLVALKLVTPSLDMAKKHYYDLAERPFFPALCRFLSSGPVVAMVFEGEDVIRQGRRMIGATSPLAADPGTIRGDLAIITGKNIIHGSDSKESAEAEIALWFTPQEINSWSKTDVEAWVY 143
            +KPD VQRGL+ +IIARFER+GFKLVA+KLVTPS   A+KHY+DL ERPFF  LC FLSSGPV+AMV+EGE VI+ GR++IGAT P  ++PGTIRGDLA++ G+NIIHGSD  E+A+ EI LWF P+E++S++    E WVY
Sbjct:   95 IKPDGVQRGLISEIIARFERKGFKLVAIKLVTPSKSFAQKHYHDLKERPFFDGLCNFLSSGPVLAMVWEGEGVIKYGRKLIGATDPQKSEPGTIRGDLAVVVGRNIIHGSDGPETAKDEINLWFKPEEVSSYTSNQ-EKWVY 235
[Close]
BLAST of Gcaud3757.t1 vs. uniprot
Match: UPI000E6FE2EA (nucleoside diphosphate kinase 3-like n=2 Tax=Papaver somniferum TaxID=3469 RepID=UPI000E6FE2EA)

HSP 1 Score: 202 bits (513), Expect = 4.030e-63
Identity = 92/142 (64.79%), Postives = 118/142 (83.10%), Query Frame = 0 
Query:    2 LKPDAVQRGLVGDIIARFERRGFKLVALKLVTPSLDMAKKHYYDLAERPFFPALCRFLSSGPVVAMVFEGEDVIRQGRRMIGATSPLAADPGTIRGDLAIITGKNIIHGSDSKESAEAEIALWFTPQEINSWSKTDVEAWVY 143
            +KPD VQRGL+ +I+ARFER+GFKLVA+KLV PS D A+KHY+DL ERPFF  LC FLSSGPV+AMV+EGE VI+ GR++IGAT P  ++PGTIRGDLA++ G+NIIHGSD  E+A+ EI LWF P+E+N+++  + E WVY
Sbjct:   95 IKPDGVQRGLISEIVARFERKGFKLVAIKLVVPSKDFAQKHYHDLKERPFFNGLCDFLSSGPVLAMVWEGEGVIKYGRKLIGATDPQKSEPGTIRGDLAVVVGRNIIHGSDGPETAKDEIKLWFKPEELNTYT-INSEKWVY 235
[Close]
BLAST of Gcaud3757.t1 vs. uniprot
Match: A0A175YEY8_DAUCS (Nucleoside diphosphate kinase n=2 Tax=Daucus carota subsp. sativus TaxID=79200 RepID=A0A175YEY8_DAUCS)

HSP 1 Score: 201 bits (510), Expect = 5.600e-63
Identity = 91/142 (64.08%), Postives = 116/142 (81.69%), Query Frame = 0 
Query:    2 LKPDAVQRGLVGDIIARFERRGFKLVALKLVTPSLDMAKKHYYDLAERPFFPALCRFLSSGPVVAMVFEGEDVIRQGRRMIGATSPLAADPGTIRGDLAIITGKNIIHGSDSKESAEAEIALWFTPQEINSWSKTDVEAWVY 143
            +KPD VQRGL+ +II+RFER+GFKLVA+K+  PS D AKKHY+DL ERPFF  LC FLSSGPV+AMV+EGE VI+ GR++IGAT P  ++PGTIRGDLA++ G+NIIHGSD  E+A+ EI LWF P+E+ S++  + E WVY
Sbjct:   72 IKPDGVQRGLISEIISRFERKGFKLVAIKITVPSKDFAKKHYHDLKERPFFDGLCDFLSSGPVIAMVWEGEGVIKYGRKLIGATDPQKSEPGTIRGDLAVVVGRNIIHGSDGPETAQDEIKLWFKPEELTSYA-INSEKWVY 212
[Close]
BLAST of Gcaud3757.t1 vs. uniprot
Match: A0A2G9I2Q9_9LAMI (Nucleoside diphosphate kinase n=1 Tax=Handroanthus impetiginosus TaxID=429701 RepID=A0A2G9I2Q9_9LAMI)

HSP 1 Score: 199 bits (505), Expect = 5.880e-63
Identity = 89/142 (62.68%), Postives = 118/142 (83.10%), Query Frame = 0 
Query:    2 LKPDAVQRGLVGDIIARFERRGFKLVALKLVTPSLDMAKKHYYDLAERPFFPALCRFLSSGPVVAMVFEGEDVIRQGRRMIGATSPLAADPGTIRGDLAIITGKNIIHGSDSKESAEAEIALWFTPQEINSWSKTDVEAWVY 143
            +KPD VQRGL+ +II+RFER+GFKLVA+K+V PS D AKKHY+DL+ERPFF  LC FLSSGPV+AMV+EGE VI+ G ++IGAT P  ++PGTIRGDLA++ G+NIIHGSD  E+A+ EI LWF P+E+ +++ ++ E W+Y
Sbjct:   19 IKPDGVQRGLISEIISRFERKGFKLVAIKIVVPSKDFAKKHYHDLSERPFFNGLCDFLSSGPVIAMVWEGEGVIKYGHKLIGATDPQKSEPGTIRGDLAVVVGRNIIHGSDGPETAKDEINLWFKPEELVTYT-SNAEKWIY 159
The following BLAST results are available for this feature:
BLAST of Gcaud3757.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2V3IK70_9FLOR5.280e-9491.67Nucleoside diphosphate kinase n=1 Tax=Gracilariops... [more]
A0A4Y7J9U8_PAPSO4.620e-6464.79Nucleoside diphosphate kinase n=2 Tax=Papaver somn... [more]
A0A2V3IH97_9FLOR1.110e-6367.36Nucleoside diphosphate kinase n=1 Tax=Gracilariops... [more]
A0A2Z7BDK9_9LAMI1.180e-6363.38Nucleoside diphosphate kinase n=1 Tax=Dorcoceras h... [more]
A0A5P1EWS8_ASPOF1.370e-6365.49Nucleoside diphosphate kinase n=2 Tax=Asparagus of... [more]
A0A2J6JNP4_LACSA1.410e-6365.49Nucleoside diphosphate kinase n=2 Tax=Lactuca sati... [more]
A0A6S7MF22_LACSI1.410e-6365.49Nucleoside diphosphate kinase n=1 Tax=Lactuca sali... [more]
UPI000E6FE2EA4.030e-6364.79nucleoside diphosphate kinase 3-like n=2 Tax=Papav... [more]
A0A175YEY8_DAUCS5.600e-6364.08Nucleoside diphosphate kinase n=2 Tax=Daucus carot... [more]
A0A2G9I2Q9_9LAMI5.880e-6362.68Nucleoside diphosphate kinase n=1 Tax=Handroanthus... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001564Nucleoside diphosphate kinasePRINTSPR01243NUCDPKINASEcoord: 42..61
score: 45.48
coord: 62..79
score: 59.5
coord: 106..125
score: 72.42
coord: 83..99
score: 64.14
IPR001564Nucleoside diphosphate kinaseHAMAPMF_00451NDP_kinasecoord: 1..130
score: 29.608381
IPR034907Nucleoside diphosphate kinase-like domainSMARTSM00562ndk_5coord: 1..132
e-value: 2.2E-74
score: 263.1
IPR034907Nucleoside diphosphate kinase-like domainPFAMPF00334NDKcoord: 1..130
e-value: 8.6E-50
score: 168.2
IPR036850Nucleoside diphosphate kinase-like domain superfamilyGENE3D3.30.70.141coord: 1..144
e-value: 1.7E-56
score: 192.3
IPR036850Nucleoside diphosphate kinase-like domain superfamilySUPERFAMILY54919Nucleoside diphosphate kinase, NDKcoord: 1..136
NoneNo IPR availablePANTHERPTHR11349NUCLEOSIDE DIPHOSPHATE KINASEcoord: 1..144
NoneNo IPR availablePANTHERPTHR11349:SF101NUCLEOSIDE DIPHOSPHATE KINASE, CYTOSOLICcoord: 1..144
NoneNo IPR availableCDDcd04413NDPk_Icoord: 1..125
e-value: 1.31548E-80
score: 231.588
IPR023005Nucleoside diphosphate kinase, active sitePROSITEPS00469NDP_KINASEScoord: 106..114

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NODE_1650_length_9296_cov_3.832048contigNODE_1650_length_9296_cov_3.832048:5034..5548 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria caudata M_176_S67 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gcaud3757.t1Gcaud3757.t1Gracilaria caudata M_176_S67 malemRNANODE_1650_length_9296_cov_3.832048 5034..5548 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gcaud3757.t1 ID=Gcaud3757.t1|Name=Gcaud3757.t1|organism=Gracilaria caudata M_176_S67 male|type=polypeptide|length=145bp
MLKPDAVQRGLVGDIIARFERRGFKLVALKLVTPSLDMAKKHYYDLAERP
FFPALCRFLSSGPVVAMVFEGEDVIRQGRRMIGATSPLAADPGTIRGDLA
IITGKNIIHGSDSKESAEAEIALWFTPQEINSWSKTDVEAWVYE*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001564Nucleoside_diP_kinase
IPR034907NDK-like_dom
IPR036850NDK-like_dom_sf
IPR023005Nucleoside_diP_kinase_AS