Gcaud8365.t1 (polypeptide) Gracilaria caudata M_176_S67 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGcaud8365.t1
Unique NameGcaud8365.t1
Typepolypeptide
OrganismGracilaria caudata M_176_S67 male (Gracilaria caudata M_176_S67 male)
Sequence length728
Homology
BLAST of Gcaud8365.t1 vs. uniprot
Match: A0A2V3J643_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J643_9FLOR)

HSP 1 Score: 323 bits (828), Expect = 4.060e-95
Identity = 266/692 (38.44%), Postives = 364/692 (52.60%), Query Frame = 0
Query:   75 QFRRFNSDGSLAAMFATPTESPGPLPDPMGDF--FENVGESSPPKTSEIEMDDVPEATEASDDVDGETSSNSQGKETSFGPVPELSPLVTPSPDILEEDEELPVESGDATENAVENPTES-KPRQSVFVSGPTTASVIFNVGEPPQFSFSSVNDDKPVQENXXXXXXXXXXXDASTSGEEIASDDKNDEPVKDGNVSEEEVAIEETETSEDELIEASSEPELDIESGGDVAIGRLQPKSPGRP-------APTNNVNPGKVSEVPTSDLPDVNSPSPTSGLSGEDSNAQEDPQP---LDNSPQSISSSPTPPNLEGK-------ENS----ANADKDMTESFAETSPVAVLSSVSDMSGNF------EDPVDSTEPDFSAEPEASGEVPVPSGEPELLSVALVVRHPPSFGAQELAEEIRLNSNEFITPDEWEIVTIFQLSQLSKFAASNVSDSDVEKDASEDGFLSFEVLLETQCT-AGVDCETKLEKNKEFIRDGRMDETLAAHDFSRVSVFLEGELIERSEPLGAIGTSGLGVGVIAGIAVGGIAVISLVVLVAVVAANMRNGSSTYS-SDY-DSELEFEDDVGPDHEFPLDQGSFMISNFGGTPRHSAAMIPWLNDSSAGSGMEYNSRSFISVDSMTPGDANRMSQYRFDETMSSASGSVVGEEVS------QVAGPEESGSTVYAVQ 727
            +FR+FN DGSL+A+FA+ T +    PDP+ +    EN   ++ P+T   E+D +PE TEA  D D +                               D E+P++  +A E      + + KPR SV   GP TAS ++ +G+PP  SFSS +D                       G+  A ++ N +   + +      + +ET   E+E IE+S E E D + G     GR  PKSP +P       AP   V+ G  +    +  P        +    E+ +      P   +D S  +   +PT   + G        E+S    A  D D  E   E   V    SV++    +       D ++   PD S EP AS E+  PS E ELLSVAL+VRHPPS+ +++LAE+IR+NSNEFI PD+WEI ++  LS+L+K    ++    V+ +   D  ++FE+LLE +C+ A   C ++ +K + FIR GRMD  LA HDF+RVSVFL+GE+ ERSEPL AIG SGLGVGVIAGIAVG                N  +GSS Y+ SDY DS+LE EDDV  ++EF  +  SFM+SNFGGTPR + A IPWLN +SA SG +  S+SFISVDSM   D N MSQYRFDET SS+S S + +  +         GP+ SGSTVY VQ
Sbjct:  193 RFRKFNLDGSLSAVFASQTPTALQSPDPIQEHETSENAFSATTPET---EVDVLPEETEAVYDGD-DVMXXXXXXXXXXXXXXXXXXXXXXXXXXXXLDNEMPMKYSEAAEEEDGRDSHNAKPRLSVSAFGPATASAVWTLGQPPDISFSSSSD-------------------TEKGGQNPAENESNTQTASNSDXXXXXXSFKET---EEEQIESSPEQEAD-DLGQSEGFGRQLPKSPVKPEESGDSPAPVTAVSQGAAATFDVATEPRGRGRKTETLTDSEEDSGHAHISPNVSMDLSFSNFKETPTNQIVGGDTVPSAGYEDSVIELAFPDLDKLEQDLEVDDVQA--SVTEAPEGYTSSEVQSDDMELMYPDQSEEPAASAELLSPSMETELLSVALIVRHPPSYNSEKLAEDIRINSNEFIAPDDWEIASLLLLSKLAKSFQRDLYTRQVQTNPDMDELVAFELLLEAECSSARAACVSRTDKYEAFIRSGRMDAALATHDFTRVSVFLQGEVKERSEPLAAIGPSGLGVGVIAGIAVGAXXXXXXXXXXXXXXTNRGSGSSGYNASDYSDSDLECEDDVEQENEFVQNGESFMVSNFGGTPRTTFANIPWLNQTSAQSGQQTGSQSFISVDSMMTNDNNTMSQYRFDETTSSSSKSDLDDLENPADIPVSAEGPDASGSTVYIVQ 855          
The following BLAST results are available for this feature:
BLAST of Gcaud8365.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A2V3J643_9FLOR4.060e-9538.44Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 242..270
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 386..412
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..70
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 136..151
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 183..227
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..437
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 312..378
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 271..290
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..576
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 605..727
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 577..604
NoneNo IPR availableTMHMMTMhelixcoord: 581..603

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NODE_163_length_42078_cov_4.640103contigNODE_163_length_42078_cov_4.640103:20514..22697 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria caudata M_176_S67 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gcaud8365.t1Gcaud8365.t1Gracilaria caudata M_176_S67 malemRNANODE_163_length_42078_cov_4.640103 20514..22697 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gcaud8365.t1 ID=Gcaud8365.t1|Name=Gcaud8365.t1|organism=Gracilaria caudata M_176_S67 male|type=polypeptide|length=728bp
MDTTGQPKPSVQPTSVQESGANVAPTTFPMTPTRTPEPNSDFATPFDFSS
PVQDDSSGVSPQSTGSEDGRPTGIQFRRFNSDGSLAAMFATPTESPGPLP
DPMGDFFENVGESSPPKTSEIEMDDVPEATEASDDVDGETSSNSQGKETS
FGPVPELSPLVTPSPDILEEDEELPVESGDATENAVENPTESKPRQSVFV
SGPTTASVIFNVGEPPQFSFSSVNDDKPVQENNDEPVEEKNDDDASTSGE
EIASDDKNDEPVKDGNVSEEEVAIEETETSEDELIEASSEPELDIESGGD
VAIGRLQPKSPGRPAPTNNVNPGKVSEVPTSDLPDVNSPSPTSGLSGEDS
NAQEDPQPLDNSPQSISSSPTPPNLEGKENSANADKDMTESFAETSPVAV
LSSVSDMSGNFEDPVDSTEPDFSAEPEASGEVPVPSGEPELLSVALVVRH
PPSFGAQELAEEIRLNSNEFITPDEWEIVTIFQLSQLSKFAASNVSDSDV
EKDASEDGFLSFEVLLETQCTAGVDCETKLEKNKEFIRDGRMDETLAAHD
FSRVSVFLEGELIERSEPLGAIGTSGLGVGVIAGIAVGGIAVISLVVLVA
VVAANMRNGSSTYSSDYDSELEFEDDVGPDHEFPLDQGSFMISNFGGTPR
HSAAMIPWLNDSSAGSGMEYNSRSFISVDSMTPGDANRMSQYRFDETMSS
ASGSVVGEEVSQVAGPEESGSTVYAVQ*
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