Gcaud2465.t1 (polypeptide) Gracilaria caudata M_176_S67 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGcaud2465.t1
Unique NameGcaud2465.t1
Typepolypeptide
OrganismGracilaria caudata M_176_S67 male (Gracilaria caudata M_176_S67 male)
Sequence length341
Homology
BLAST of Gcaud2465.t1 vs. uniprot
Match: A0A2V3IVP6_9FLOR (BCNT-C domain-containing protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IVP6_9FLOR)

HSP 1 Score: 158 bits (399), Expect = 2.360e-41
Identity = 90/170 (52.94%), Postives = 115/170 (67.65%), Query Frame = 0
Query:  171 EQPAPKRARVSPPNNKSIDDIWAEMNNNNRPLSQPQQQPVEQSTAARDDGGDGDGVRNPAEKATTPFKVRMLHDLEKEQNELNRPHTSADTKAPATGLEAVLGLVRGKKAYTVLDGTRKQWSEFKKDEQVNEELETYKKGRQRYTDRMAFLARSDVREWEFEQRGKRKRR 340
            ++PA K+ARVS  +NK+IDDIWAEMN    P   P       +T A    G    +  P+      FK+  L DLEK+ ++         ++   TGL+AVL LVRGKK+ TVLDGTR++W+EFKKD+ V EELETYKKG+ RYTDRMAFLAR+DVREW++EQRGKR+RR
Sbjct:  240 DEPAVKKARVSD-DNKTIDDIWAEMNKTTAPNKAPT------ATNAAAHFGLQHWLSKPSTAPKPTFKIPRLQDLEKDADQQQTTQRPKVSQEALTGLDAVLSLVRGKKSATVLDGTRQKWTEFKKDDHVREELETYKKGKHRYTDRMAFLARTDVREWQYEQRGKRRRR 402          
BLAST of Gcaud2465.t1 vs. uniprot
Match: S0F3X3_CHOCR (BCNT-C domain-containing protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=S0F3X3_CHOCR)

HSP 1 Score: 101 bits (252), Expect = 1.260e-22
Identity = 61/111 (54.95%), Postives = 78/111 (70.27%), Query Frame = 0
Query:  237 FKVRMLHDLEKEQNELNRPHTSADTKAP------ATGLEAVLGLVRGKKAYTVLDGTRKQWSEFK-KDEQVNEELETYKKGRQRYTDRMAFLARSDVREWEFEQRGKRKRR 340
            FKV++L +LE E+ +      +AD  A       ATGLEA L +VRG +  TVL  T+  WSEFK KD++V +ELE YKK + RYTD++AFL RSDVREWE+EQ+GKRKRR
Sbjct:   37 FKVKLLGELE-EEAKTREAKEAADEVASKAGPSRATGLEAALNIVRGPRKETVLTKTKDVWSEFKGKDDKVVDELEKYKKDKNRYTDKVAFLKRSDVREWEYEQQGKRKRR 146          
BLAST of Gcaud2465.t1 vs. uniprot
Match: A0A1Y1HU16_KLENI (BCNT-C domain-containing protein n=1 Tax=Klebsormidium nitens TaxID=105231 RepID=A0A1Y1HU16_KLENI)

HSP 1 Score: 67.4 bits (163), Expect = 4.690e-9
Identity = 38/99 (38.38%), Postives = 62/99 (62.63%), Query Frame = 0
Query:  238 KVRMLHDLEKEQNELNR---PHTSADTKAPA-TGLEAVLGLVRGKKAYTVLDGTRKQWSEFKKDEQVNEELETYKKGRQRYTDRMAFLARSDVREWEFE 332
            +V  + D   E+ E+ R   P+ +A  K  A +GL+A++  +  KK   VLD +RK W E+K ++ V ++LE YKK   +Y D++AFL R+++RE+E E
Sbjct:  187 QVTEVRDFAGEKVEVTRTVDPNAAAKRKEKAVSGLDALIQQIEKKKKMNVLDKSRKDWGEYKDEQGVTDQLEEYKKSNDKYLDKVAFLQRAELREYEVE 285          
BLAST of Gcaud2465.t1 vs. uniprot
Match: UPI001CB9AA9C (craniofacial development protein 1 n=1 Tax=Erigeron canadensis TaxID=72917 RepID=UPI001CB9AA9C)

HSP 1 Score: 66.6 bits (161), Expect = 6.750e-9
Identity = 40/103 (38.83%), Postives = 62/103 (60.19%), Query Frame = 0
Query:  238 KVRMLHDLEKEQNEL------NRPHTSADTKAPA--TGLEAVLGLVRGKKAYTVLDGTRKQWSEFKKDEQVNEELETYKKGRQRYTDRMAFLARSDVREWEFE 332
            +VR + D   E  E+      N   TS   K  A  + ++A+L  ++ K   +VLD T+K W EFK++ +++EELETYKK   +Y D+++FL R+D RE+E E
Sbjct:  152 EVREVRDFAGESIEVKKLVDANMAETSEKEKGGAAPSAVDAILEQIKKKPKLSVLDKTKKDWGEFKEENRLDEELETYKKSGNQYLDKVSFLERADYREYERE 254          
BLAST of Gcaud2465.t1 vs. uniprot
Match: A0A5N6NNN6_9ASTR (BCNT-C domain-containing protein n=1 Tax=Mikania micrantha TaxID=192012 RepID=A0A5N6NNN6_9ASTR)

HSP 1 Score: 65.5 bits (158), Expect = 1.440e-8
Identity = 37/103 (35.92%), Postives = 63/103 (61.17%), Query Frame = 0
Query:  237 FKVRMLHDLEKEQNELNRPHTSADTKA-------PATGLEAVLGLVRGKKAYTVLDGTRKQWSEFKKDEQVNEELETYKKGRQRYTDRMAFLARSDVREWEFE 332
             +VR + D   E  E+ +   +  T+A        ++ ++A+L  ++ K   +VLD T+K W EFK++ Q++EELETYKK   +Y D+++FL R+D R++E E
Sbjct:  137 IEVREVRDFAGESIEVKKLVDANMTEALEKEKGGASSAVDAILEQIKKKPKLSVLDKTKKDWGEFKEENQLDEELETYKKSGNQYLDKVSFLERADYRQFERE 239          
BLAST of Gcaud2465.t1 vs. uniprot
Match: A0A2J6L8K5_LACSA (BCNT-C domain-containing protein n=3 Tax=Lactuca TaxID=4235 RepID=A0A2J6L8K5_LACSA)

HSP 1 Score: 65.5 bits (158), Expect = 1.640e-8
Identity = 38/105 (36.19%), Postives = 63/105 (60.00%), Query Frame = 0
Query:  237 FKVRMLHDLEKEQNELNRPHTSADTKAPA---------TGLEAVLGLVRGKKAYTVLDGTRKQWSEFKKDEQVNEELETYKKGRQRYTDRMAFLARSDVREWEFE 332
             +VR + D   E  E+ +    A+TK  +         + ++++L  +R K   +VLD T+K W EFK++ +++EELETYKK   +Y D+++FL R+D RE+E E
Sbjct:  149 IEVREMRDFAGEAIEVKK-FVDANTKEASEKEKGSSAPSAVDSILEQIRKKPKLSVLDKTKKDWGEFKEENRLDEELETYKKSGNKYLDKVSFLQRADYREFERE 252          
BLAST of Gcaud2465.t1 vs. uniprot
Match: A0A2U1MSX4_ARTAN (BCNT-C domain-containing protein n=1 Tax=Artemisia annua TaxID=35608 RepID=A0A2U1MSX4_ARTAN)

HSP 1 Score: 64.7 bits (156), Expect = 2.480e-8
Identity = 39/104 (37.50%), Postives = 60/104 (57.69%), Query Frame = 0
Query:  237 FKVRMLHDLEKEQNELNR----PHTSADTKAPATG----LEAVLGLVRGKKAYTVLDGTRKQWSEFKKDEQVNEELETYKKGRQRYTDRMAFLARSDVREWEFE 332
             +VR + D   E  E+ +        A  K  A G    ++++L  ++ K   +VLD T+K W EFK++ Q++EELETYKK   +Y D+ +FL R+D RE+E E
Sbjct:  130 IEVREVRDFAGESIEVKKLVDASTIEASEKEKAGGAPSAVDSILEQIKKKPKLSVLDKTKKDWGEFKEENQLDEELETYKKSGNQYLDKQSFLQRADYREYERE 233          
BLAST of Gcaud2465.t1 vs. uniprot
Match: A0A7J7E0I2_TRIWF (BCNT-C domain-containing protein n=2 Tax=Tripterygium wilfordii TaxID=458696 RepID=A0A7J7E0I2_TRIWF)

HSP 1 Score: 65.5 bits (158), Expect = 2.540e-8
Identity = 34/72 (47.22%), Postives = 54/72 (75.00%), Query Frame = 0
Query:  262 KAPA-TGLEAVLGLVRGKKAYTVLDGTRKQWSEFKKDEQVNEELETYKKGRQRYTDRMAFLARSDVREWEFE 332
            KAPA + ++AVL  ++ K+  +VLD T+K W E+K+++ V EEL+ YKKG  +Y ++++FL R+DVRE+E E
Sbjct:  237 KAPAASAVDAVLEQIKKKQKLSVLDKTKKDWGEYKENKGVEEELDAYKKGSNQYLEKVSFLQRADVREFERE 308          
BLAST of Gcaud2465.t1 vs. uniprot
Match: A0A103XV37_CYNCS (BCNT-C domain-containing protein n=3 Tax=Cynara cardunculus var. scolymus TaxID=59895 RepID=A0A103XV37_CYNCS)

HSP 1 Score: 65.1 bits (157), Expect = 2.890e-8
Identity = 41/109 (37.61%), Postives = 61/109 (55.96%), Query Frame = 0
Query:  226 VRNPAEKATTPFKVRMLHDLEKEQNELNRPHTSADTKAPATG--LEAVLGLVRGKKAYTVLDGTRKQWSEFKKDEQVNEELETYKKGRQRYTDRMAFLARSDVREWEFE 332
            VR   + A    +V+ L D        N    S   K    G  ++A+L  +R K   +VLD T+K W EFK++ +++EELETYKK   +Y D+++FL R+D RE+E E
Sbjct:  183 VREVRDFAGESIEVKKLVDA-------NMKEASEKEKGAGGGSAVDAILEQIRKKPKLSVLDKTKKDWGEFKEENRLDEELETYKKSGNQYLDKVSFLQRADYREFERE 284          
BLAST of Gcaud2465.t1 vs. uniprot
Match: A0A444FV44_ENSVE (BCNT-C domain-containing protein (Fragment) n=2 Tax=Ensete ventricosum TaxID=4639 RepID=A0A444FV44_ENSVE)

HSP 1 Score: 63.5 bits (153), Expect = 3.070e-8
Identity = 38/107 (35.51%), Postives = 62/107 (57.94%), Query Frame = 0
Query:  237 FKVRMLHDLEKEQNELNRPHTSADTK----------APATGLEAVLGLVRGKKAYTVLDGTRKQWSEFKKDEQ-VNEELETYKKGRQRYTDRMAFLARSDVREWEFE 332
            F +  +HD   E+ E+ +    AD+K           P++ L+ +L  ++ K   +VLD T+K W EFK++ Q + EEL+ YKK   +Y D+++FL R+D RE+E E
Sbjct:   76 FSITEVHDFAGEEIEVKKL-VDADSKEAAEKARVAGGPSSALDTILEQIKKKPKLSVLDKTKKDWGEFKEENQGMEEELDAYKKSSNQYLDKVSFLQRTDHREFERE 181          
The following BLAST results are available for this feature:
BLAST of Gcaud2465.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2V3IVP6_9FLOR2.360e-4152.94BCNT-C domain-containing protein n=1 Tax=Gracilari... [more]
S0F3X3_CHOCR1.260e-2254.95BCNT-C domain-containing protein n=1 Tax=Chondrus ... [more]
A0A1Y1HU16_KLENI4.690e-938.38BCNT-C domain-containing protein n=1 Tax=Klebsormi... [more]
UPI001CB9AA9C6.750e-938.83craniofacial development protein 1 n=1 Tax=Erigero... [more]
A0A5N6NNN6_9ASTR1.440e-835.92BCNT-C domain-containing protein n=1 Tax=Mikania m... [more]
A0A2J6L8K5_LACSA1.640e-836.19BCNT-C domain-containing protein n=3 Tax=Lactuca T... [more]
A0A2U1MSX4_ARTAN2.480e-837.50BCNT-C domain-containing protein n=1 Tax=Artemisia... [more]
A0A7J7E0I2_TRIWF2.540e-847.22BCNT-C domain-containing protein n=2 Tax=Tripteryg... [more]
A0A103XV37_CYNCS2.890e-837.61BCNT-C domain-containing protein n=3 Tax=Cynara ca... [more]
A0A444FV44_ENSVE3.070e-835.51BCNT-C domain-containing protein (Fragment) n=2 Ta... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR011421BCNT-C domainPFAMPF07572BCNTcoord: 268..335
e-value: 3.4E-13
score: 49.5
IPR011421BCNT-C domainPROSITEPS51279BCNT_Ccoord: 262..340
score: 13.714236
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 173..254
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 190..214
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 237..254

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NODE_1614_length_9483_cov_3.228492contigNODE_1614_length_9483_cov_3.228492:2604..5707 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria caudata M_176_S67 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gcaud2465.t1Gcaud2465.t1Gracilaria caudata M_176_S67 malemRNANODE_1614_length_9483_cov_3.228492 2604..5707 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gcaud2465.t1 ID=Gcaud2465.t1|Name=Gcaud2465.t1|organism=Gracilaria caudata M_176_S67 male|type=polypeptide|length=341bp
MGSWDVDDAVGGMISADASTVWSEEGLDDGVELSEAEHMMAKLNESCLQM
GMDYLEEISRGCGAAAEMAWARAFPHVDLRQLFPSGGISSERNPFNEVDC
SVLDDYTKNADPELTKEQHWMARENEARLQIEVEYLEELSRKHAQTSRAQ
WKMAYPHCARYYASGSVGRVEQPAPKRARVSPPNNKSIDDIWAEMNNNNR
PLSQPQQQPVEQSTAARDDGGDGDGVRNPAEKATTPFKVRMLHDLEKEQN
ELNRPHTSADTKAPATGLEAVLGLVRGKKAYTVLDGTRKQWSEFKKDEQV
NEELETYKKGRQRYTDRMAFLARSDVREWEFEQRGKRKRR*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR011421BCNT-C