Gcaud1742.t1 (polypeptide) Gracilaria caudata M_176_S67 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	Gcaud1742.t1
Unique Name	Gcaud1742.t1
Type	polypeptide
Organism	Gracilaria caudata M_176_S67 male (Gracilaria caudata M_176_S67 male)
Sequence length	153

Homology

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BLAST of Gcaud1742.t1 vs. uniprot
Match: A0A2V3IWP0_9FLOR (Nucleoside diphosphate kinase n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IWP0_9FLOR)

HSP 1 Score: 281 bits (719), Expect = 1.440e-95
Identity = 135/152 (88.82%), Postives = 145/152 (95.39%), Query Frame = 0

Query:    1 MARTERTFIAVKPDGMNRGILGAIVSRFENKGYKLVGIKTLVPTKQLAEEHYAALKAKPFFNDLVEFITSGPVCAMVWEGEQVVVTARKMIGETNPLSSAPGTIRGDYAVDVGRNVIHGSDAVETAEREIGLWFGENELTSWQPTSSVWIYE 152
            MARTERTFIAVKPDGMNRGILG I+SRFE KGYKLVGIKTLVP+KQLAEEHY+ALK KPFF DLV+FITSGPVCAMVWEGEQVVVTARKMIGETNPLSSAPGTIRGD+AVDVGRNVIHGSDAVETA+REI LWF + ELT+W+PTS+VWIYE
Sbjct:    1 MARTERTFIAVKPDGMNRGILGNIISRFEAKGYKLVGIKTLVPSKQLAEEHYSALKEKPFFKDLVDFITSGPVCAMVWEGEQVVVTARKMIGETNPLSSAPGTIRGDFAVDVGRNVIHGSDAVETAQREISLWFEQGELTAWEPTSAVWIYE 152

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BLAST of Gcaud1742.t1 vs. uniprot
Match: R7QBR9_CHOCR (Nucleoside-diphosphate kinase n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QBR9_CHOCR)

HSP 1 Score: 239 bits (611), Expect = 3.780e-79
Identity = 116/152 (76.32%), Postives = 132/152 (86.84%), Query Frame = 0

Query:    1 MARTERTFIAVKPDGMNRGILGAIVSRFENKGYKLVGIKTLVPTKQLAEEHYAALKAKPFFNDLVEFITSGPVCAMVWEGEQVVVTARKMIGETNPLSSAPGTIRGDYAVDVGRNVIHGSDAVETAEREIGLWFGENELTSWQPTSSVWIYE 152
            M++ ERTFIA+KPDGMNRG+LG I+SRFE KGYKLVGIKTLVP++QLAE HYA+L +KPFF  LV+FITSGPVCAMVWEG  VV TARKMIGETNPLSS PGTIRGD+ VDVGRN   GSDAV+TA REIG+WF  +EL +W PT+SVWIYE
Sbjct:    1 MSQDERTFIALKPDGMNRGLLGNIISRFEAKGYKLVGIKTLVPSRQLAETHYASLSSKPFFAGLVDFITSGPVCAMVWEGAGVVTTARKMIGETNPLSSNPGTIRGDFGVDVGRN---GSDAVDTATREIGIWFEPSELCTWSPTASVWIYE 149

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BLAST of Gcaud1742.t1 vs. uniprot
Match: A0A5J4YUP0_PORPP (Nucleoside diphosphate kinase n=1 Tax=Porphyridium purpureum TaxID=35688 RepID=A0A5J4YUP0_PORPP)

HSP 1 Score: 228 bits (582), Expect = 1.130e-74
Identity = 106/148 (71.62%), Postives = 120/148 (81.08%), Query Frame = 0

Query:    5 ERTFIAVKPDGMNRGILGAIVSRFENKGYKLVGIKTLVPTKQLAEEHYAALKAKPFFNDLVEFITSGPVCAMVWEGEQVVVTARKMIGETNPLSSAPGTIRGDYAVDVGRNVIHGSDAVETAEREIGLWFGENELTSWQPTSSVWIYE 152
            ERTFIA+KPDG+NR ++G I+SRFE +GYKLV +K L P+K+LAE HYAAL +KPFF  LVEFI SGPVCAMVWEG  VV T R MIG T P  SAPGTIRGDY +DVGRNVIHGSDAV+TAEREIG+WF   EL  W+PT S WIYE
Sbjct:    6 ERTFIAIKPDGVNRALIGDIISRFEKRGYKLVAMKLLKPSKELAETHYAALSSKPFFAGLVEFICSGPVCAMVWEGTDVVKTGRTMIGATKPTESAPGTIRGDYGIDVGRNVIHGSDAVDTAEREIGIWFKPEELVEWEPTMSTWIYE 153

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BLAST of Gcaud1742.t1 vs. uniprot
Match: A0A7C3ZIH8_9CYAN (Nucleoside diphosphate kinase n=2 Tax=Oscillatoriales TaxID=1150 RepID=A0A7C3ZIH8_9CYAN)

HSP 1 Score: 221 bits (564), Expect = 6.040e-72
Identity = 107/152 (70.39%), Postives = 123/152 (80.92%), Query Frame = 0

Query:    1 MARTERTFIAVKPDGMNRGILGAIVSRFENKGYKLVGIKTLVPTKQLAEEHYAALKAKPFFNDLVEFITSGPVCAMVWEGEQVVVTARKMIGETNPLSSAPGTIRGDYAVDVGRNVIHGSDAVETAEREIGLWFGENELTSWQPTSSVWIYE 152
            M R ERTFIA+KPDG+ RG++G IVSRFE KGY LVG+K L  +++LAE HYA  K KPFF  LV+FITSGPV AMVWEG+ VV  ARK+IG TNPL+S PGTIRGD+ VDVGRN+IHGSDAV TAEREI LWF + EL SWQPT + WIYE
Sbjct:    1 MEREERTFIAIKPDGVQRGLVGQIVSRFEAKGYTLVGMKLLQVSRELAEAHYAEHKEKPFFPGLVQFITSGPVVAMVWEGKGVVAAARKLIGATNPLNSEPGTIRGDFGVDVGRNIIHGSDAVATAEREIKLWFTDAELASWQPTVTPWIYE 152

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BLAST of Gcaud1742.t1 vs. uniprot
Match: A0A7S1TKR2_9RHOD (Nucleoside diphosphate kinase n=1 Tax=Erythrolobus australicus TaxID=1077150 RepID=A0A7S1TKR2_9RHOD)

HSP 1 Score: 222 bits (566), Expect = 2.230e-71
Identity = 99/148 (66.89%), Postives = 123/148 (83.11%), Query Frame = 0

Query:    5 ERTFIAVKPDGMNRGILGAIVSRFENKGYKLVGIKTLVPTKQLAEEHYAALKAKPFFNDLVEFITSGPVCAMVWEGEQVVVTARKMIGETNPLSSAPGTIRGDYAVDVGRNVIHGSDAVETAEREIGLWFGENELTSWQPTSSVWIYE 152
            ERTFIA+KPDG+NRG++G I++RFE KGY+LV +K L P+K LA+ HY AL +KPFFNDLV+FI SGPV AMVW+G  VV+T R+MIG T P  SAPGTIRGD+ ++VGRNVIHGSDAV+TA+REIG+WF   EL SW+PT + W+YE
Sbjct:   66 ERTFIAIKPDGVNRGLVGQIIARFEQKGYQLVALKMLTPSKSLAQTHYEALSSKPFFNDLVDFICSGPVVAMVWQGTDVVLTGRRMIGATKPSESAPGTIRGDFGLEVGRNVIHGSDAVDTAQREIGIWFEPQELNSWEPTINCWVYE 213

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BLAST of Gcaud1742.t1 vs. uniprot
Match: A0A1S4NYF9_NAEFO (Nucleoside diphosphate kinase n=3 Tax=Naegleria TaxID=5761 RepID=A0A1S4NYF9_NAEFO)

HSP 1 Score: 218 bits (555), Expect = 1.370e-70
Identity = 99/148 (66.89%), Postives = 120/148 (81.08%), Query Frame = 0

Query:    5 ERTFIAVKPDGMNRGILGAIVSRFENKGYKLVGIKTLVPTKQLAEEHYAALKAKPFFNDLVEFITSGPVCAMVWEGEQVVVTARKMIGETNPLSSAPGTIRGDYAVDVGRNVIHGSDAVETAEREIGLWFGENELTSWQPTSSVWIYE 152
            ERTFIA+KPD + RG++G I++RFE KG+KLV +K + P+  LA++HYA    KPFFN LVEF+TSGPV AMVWEG+ VV  ARKMIG T PL SAPGTIRGD+A+DVGRN+IHGSDAVETA+REI LWF ++EL  W PT + WIYE
Sbjct:    4 ERTFIALKPDAVQRGLVGTIIARFEQKGFKLVALKLITPSADLAKKHYAEHDGKPFFNGLVEFLTSGPVAAMVWEGKGVVAAARKMIGATKPLESAPGTIRGDFAIDVGRNIIHGSDAVETAQREIALWFQDSELNEWTPTQNKWIYE 151

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BLAST of Gcaud1742.t1 vs. uniprot
Match: A0A261KVZ3_9CYAN (Nucleoside diphosphate kinase n=1 Tax=Hydrocoleum sp. CS-953 TaxID=1671698 RepID=A0A261KVZ3_9CYAN)

HSP 1 Score: 216 bits (550), Expect = 7.420e-70
Identity = 100/148 (67.57%), Postives = 121/148 (81.76%), Query Frame = 0

Query:    5 ERTFIAVKPDGMNRGILGAIVSRFENKGYKLVGIKTLVPTKQLAEEHYAALKAKPFFNDLVEFITSGPVCAMVWEGEQVVVTARKMIGETNPLSSAPGTIRGDYAVDVGRNVIHGSDAVETAEREIGLWFGENELTSWQPTSSVWIYE 152
            ERTFIA+KPDG+ RG++G I+SRFE KG+ LVG+K +  +K+LAE+HY   K +PFF  L++FITSGPV AMVWEGE VV +ARK+IG TNPLS+ PGTIRGDY V VGRN+IHGSDA+ETA+ EI LWF E EL SWQPT + WIYE
Sbjct:    2 ERTFIAIKPDGVQRGLVGQIISRFETKGFTLVGLKIMSVSKELAEKHYDVHKERPFFPGLIQFITSGPVVAMVWEGEGVVASARKIIGATNPLSAEPGTIRGDYGVTVGRNLIHGSDAIETAQTEISLWFQEEELVSWQPTLTPWIYE 149

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BLAST of Gcaud1742.t1 vs. uniprot
Match: A0A2T1DQH2_9CYAN (Nucleoside diphosphate kinase n=1 Tax=filamentous cyanobacterium CCP2 TaxID=2107700 RepID=A0A2T1DQH2_9CYAN)

HSP 1 Score: 216 bits (550), Expect = 7.420e-70
Identity = 101/148 (68.24%), Postives = 121/148 (81.76%), Query Frame = 0

Query:    5 ERTFIAVKPDGMNRGILGAIVSRFENKGYKLVGIKTLVPTKQLAEEHYAALKAKPFFNDLVEFITSGPVCAMVWEGEQVVVTARKMIGETNPLSSAPGTIRGDYAVDVGRNVIHGSDAVETAEREIGLWFGENELTSWQPTSSVWIYE 152
            ERTFIAVKPDG+ R ++G I+ RFE KG+ LVG+K L  +++LAE+HY   K KPFF  LV FITSGPV AMVWEGE VV +ARK+IG TNPLS+ PGTIRGDY V +GRN+IHGSDAVETA+REIGLWF ++EL SWQPT + W+YE
Sbjct:    2 ERTFIAVKPDGVQRALVGEIIQRFEAKGFTLVGLKLLNVSRELAEKHYDVHKDKPFFAGLVNFITSGPVVAMVWEGEGVVASARKLIGATNPLSAEPGTIRGDYGVSIGRNLIHGSDAVETAQREIGLWFSDSELASWQPTITPWLYE 149

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BLAST of Gcaud1742.t1 vs. uniprot
Match: A0A6T6L8M2_9RHOD (Nucleoside diphosphate kinase n=2 Tax=Rhodosorus marinus TaxID=101924 RepID=A0A6T6L8M2_9RHOD)

HSP 1 Score: 218 bits (554), Expect = 9.140e-70
Identity = 103/148 (69.59%), Postives = 117/148 (79.05%), Query Frame = 0

Query:    5 ERTFIAVKPDGMNRGILGAIVSRFENKGYKLVGIKTLVPTKQLAEEHYAALKAKPFFNDLVEFITSGPVCAMVWEGEQVVVTARKMIGETNPLSSAPGTIRGDYAVDVGRNVIHGSDAVETAEREIGLWFGENELTSWQPTSSVWIYE 152
            ERTFIA+KPDG NRG++G I++RFE KGYKLV +K + P+K+LAE HY ALK KPFF  LVEFI SG V AMVWEG  VV T R+MIG TNPL SAPGTIRGD  +DVGRNVIHGSDAVETA+REIG+WF   EL  W  T+  WIYE
Sbjct:   51 ERTFIAIKPDGTNRGLIGEIITRFEKKGYKLVAMKAIKPSKELAETHYDALKEKPFFGPLVEFICSGLVIAMVWEGTGVVKTGRQMIGATNPLESAPGTIRGDLGIDVGRNVIHGSDAVETADREIGIWFKPEELVDWDQTAKEWIYE 198

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BLAST of Gcaud1742.t1 vs. uniprot
Match: UPI0019132D43 (nucleoside-diphosphate kinase n=1 Tax=Aphanocapsa montana TaxID=327565 RepID=UPI0019132D43)

HSP 1 Score: 216 bits (549), Expect = 1.420e-69
Identity = 97/148 (65.54%), Postives = 119/148 (80.41%), Query Frame = 0

Query:    5 ERTFIAVKPDGMNRGILGAIVSRFENKGYKLVGIKTLVPTKQLAEEHYAALKAKPFFNDLVEFITSGPVCAMVWEGEQVVVTARKMIGETNPLSSAPGTIRGDYAVDVGRNVIHGSDAVETAEREIGLWFGENELTSWQPTSSVWIYE 152
            ERTFIA+KPDG+ RG++G ++ RFE KG+ LVG+K +  ++ LAE HY   + KPFF+ LV+FITSGPV AMVWEG+ VV  ARKMIG TNPL S PGTIRGD+ +D+GRN+IHGSDAVETA+REI LWF +NEL +W PT S WIYE
Sbjct:   11 ERTFIAIKPDGVQRGLVGTVIQRFEAKGFTLVGLKLIQVSRDLAEAHYGEHREKPFFSGLVDFITSGPVVAMVWEGKGVVAAARKMIGSTNPLQSEPGTIRGDFGIDIGRNIIHGSDAVETAQREISLWFQDNELANWSPTLSSWIYE 158

The following BLAST results are available for this feature:

BLAST of Gcaud1742.t1 vs. uniprot

BLAST of Gcaud1742.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
A0A2V3IWP0_9FLOR	1.440e-95	88.82	Nucleoside diphosphate kinase n=1 Tax=Gracilariops...	[more]
R7QBR9_CHOCR	3.780e-79	76.32	Nucleoside-diphosphate kinase n=1 Tax=Chondrus cri...	[more]
A0A5J4YUP0_PORPP	1.130e-74	71.62	Nucleoside diphosphate kinase n=1 Tax=Porphyridium...	[more]
A0A7C3ZIH8_9CYAN	6.040e-72	70.39	Nucleoside diphosphate kinase n=2 Tax=Oscillatoria...	[more]
A0A7S1TKR2_9RHOD	2.230e-71	66.89	Nucleoside diphosphate kinase n=1 Tax=Erythrolobus...	[more]
A0A1S4NYF9_NAEFO	1.370e-70	66.89	Nucleoside diphosphate kinase n=3 Tax=Naegleria Ta...	[more]
A0A261KVZ3_9CYAN	7.420e-70	67.57	Nucleoside diphosphate kinase n=1 Tax=Hydrocoleum ...	[more]
A0A2T1DQH2_9CYAN	7.420e-70	68.24	Nucleoside diphosphate kinase n=1 Tax=filamentous ...	[more]
A0A6T6L8M2_9RHOD	9.140e-70	69.59	Nucleoside diphosphate kinase n=2 Tax=Rhodosorus m...	[more]
UPI0019132D43	1.420e-69	65.54	nucleoside-diphosphate kinase n=1 Tax=Aphanocapsa ...	[more]

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InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001564	Nucleoside diphosphate kinase	PRINTS	PR01243	NUCDPKINASE	coord: 71..88 score: 60.39 coord: 92..108 score: 67.36 coord: 115..134 score: 67.9 coord: 7..29 score: 56.87 coord: 51..70 score: 55.73
IPR001564	Nucleoside diphosphate kinase	HAMAP	MF_00451	NDP_kinase	coord: 4..139 score: 33.778568
IPR034907	Nucleoside diphosphate kinase-like domain	SMART	SM00562	ndk_5	coord: 4..141 e-value: 1.1E-82 score: 290.7
IPR034907	Nucleoside diphosphate kinase-like domain	PFAM	PF00334	NDK	coord: 5..138 e-value: 1.3E-54 score: 183.9
IPR036850	Nucleoside diphosphate kinase-like domain superfamily	GENE3D	3.30.70.141		coord: 1..152 e-value: 1.5E-62 score: 212.0
IPR036850	Nucleoside diphosphate kinase-like domain superfamily	SUPERFAMILY	54919	Nucleoside diphosphate kinase, NDK	coord: 4..152
None	No IPR available	PANTHER	PTHR11349:SF44	NUCLEOSIDE DIPHOSPHATE KINASE II, CHLOROPLASTIC	coord: 2..151
None	No IPR available	PANTHER	PTHR11349	NUCLEOSIDE DIPHOSPHATE KINASE	coord: 2..151
None	No IPR available	CDD	cd04413	NDPk_I	coord: 5..134 e-value: 7.10317E-86 score: 245.456
IPR023005	Nucleoside diphosphate kinase, active site	PROSITE	PS00469	NDP_KINASES	coord: 115..123

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
NODE_1608_length_9502_cov_3.964935	contig	NODE_1608_length_9502_cov_3.964935:5576..6221 -

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-06-01
Diamond blastp: OGS1.0 vs UniRef90	2022-06-02
Gracilaria caudata M_176_S67 male OGS1.0	2022-05-09

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
Gcaud1742.t1	Gcaud1742.t1	Gracilaria caudata M_176_S67 male	mRNA	NODE_1608_length_9502_cov_3.964935 5576..6221 -

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>Gcaud1742.t1 ID=Gcaud1742.t1|Name=Gcaud1742.t1|organism=Gracilaria caudata M_176_S67 male|type=polypeptide|length=153bp
MARTERTFIAVKPDGMNRGILGAIVSRFENKGYKLVGIKTLVPTKQLAEE
HYAALKAKPFFNDLVEFITSGPVCAMVWEGEQVVVTARKMIGETNPLSSA
PGTIRGDYAVDVGRNVIHGSDAVETAEREIGLWFGENELTSWQPTSSVWI
YE*

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR001564	Nucleoside_diP_kinase
IPR034907	NDK-like_dom
IPR036850	NDK-like_dom_sf
IPR023005	Nucleoside_diP_kinase_AS