Gcaud2548.t1 (polypeptide) Gracilaria caudata M_176_S67 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGcaud2548.t1
Unique NameGcaud2548.t1
Typepolypeptide
OrganismGracilaria caudata M_176_S67 male (Gracilaria caudata M_176_S67 male)
Sequence length188
Homology
BLAST of Gcaud2548.t1 vs. uniprot
Match: A0A2V3J951_9FLOR (UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J951_9FLOR)

HSP 1 Score: 291 bits (746), Expect = 8.100e-97
Identity = 140/185 (75.68%), Postives = 160/185 (86.49%), Query Frame = 0
Query:    1 MYNRLVREAPTFAPAYSNRANVLVAGGRYSEAERDYDEALKLAPSDGDAWVLYVNRGATRLALGRTEDALGDLNDAYRLRGDDQTVLSNRASVYEVLGKWDNAIRDYQKALKSNDVQPFWIRYALVLFQRNKSFEALSILKRVAAKFPDVSDVHAALALVYYDRGDIAAAETEWSAVDRPRLFEN 185
            +YN+LV +AP FAPAYSNRAN+LVA GRY +A  DYD +L+LAP D DAWV++VNRGAT LA+G    AL D+N A+ LRGDD TV+SNRA+VYEVLGKWDNAIRDYQKAL+SNDVQPFWIRYAL LFQRNKS EAL+ILKRVAA+FP  +DVH A+ALVYYDR D AAAETEWSAVDRP+LFEN
Sbjct:   94 LYNQLVEQAPNFAPAYSNRANILVARGRYQDARTDYDTSLRLAPLDTDAWVVHVNRGATYLAMGDASAALDDMNVAHELRGDDPTVMSNRAAVYEVLGKWDNAIRDYQKALRSNDVQPFWIRYALALFQRNKSVEALAILKRVAARFPGFNDVHVAMALVYYDRNDFAAAETEWSAVDRPKLFEN 278          
BLAST of Gcaud2548.t1 vs. uniprot
Match: R7QMM9_CHOCR (TPR repeat-containing protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QMM9_CHOCR)

HSP 1 Score: 241 bits (614), Expect = 7.750e-76
Identity = 118/185 (63.78%), Postives = 146/185 (78.92%), Query Frame = 0
Query:    2 YNRLVREAPTFAPAYSNRANVLVAGGRYSEAERDYDEALKLAPSDGDAWVLYVNRGATRLALGRTED-ALGDLNDAYRLRGDDQTVLSNRASVYEVLGKWDNAIRDYQKALKSNDVQPFWIRYALVLFQRNKSFEALSILKRVAAKFPDVSDVHAALALVYYDRGDIAAAETEWSAVDRPRLFEN 185
            Y+ + +  P FAPAYSNR N+  A  ++ +A  +YD +L+LAP D D+WV++VNRG T+LA G     AL D+N A  LR  +  +LSNRA V+EV+GKWDNAIRDYQ AL+SNDVQPFW RY LVLFQRNKS+EALSILKRVA +F DVSDVHAA+A++Y+DRGDIA AET+WS VDRPRLFE+
Sbjct:  170 YDAITKSDPDFAPAYSNRGNIFAAQKKFDQAITEYDRSLELAPLDNDSWVVFVNRGVTKLARGDDPYIALADMNIANELRAGNDIILSNRAGVWEVMGKWDNAIRDYQAALQSNDVQPFWERYGLVLFQRNKSYEALSILKRVATRF-DVSDVHAAMAVIYFDRGDIAEAETQWSLVDRPRLFES 353          
BLAST of Gcaud2548.t1 vs. uniprot
Match: M2X3Y3_GALSU (Uncharacterized protein n=1 Tax=Galdieria sulphuraria TaxID=130081 RepID=M2X3Y3_GALSU)

HSP 1 Score: 183 bits (464), Expect = 1.640e-53
Identity = 84/188 (44.68%), Postives = 128/188 (68.09%), Query Frame = 0
Query:    1 MYNRLVREAPTFAPAYSNRANVLVAGGRYSEAERDYDEALKLAPSDGDAWVLYVNRGATRLALGRTEDALGDLNDAYRLRGDDQTVLSNRASVYEVLGKWDNAIRDYQKALKS--NDVQPFWIRYALVLFQRNKSFEALSILKRVAAKFPDVSDVHAALALVYYDRGDIAAAETEWSAVDRPRLFENI 186
            +Y +L++E PTFAPAYSN AN+ +  G+YS+A  +Y  AL+LAP   D W++Y+NR  T +AL   E A+ D+  A + +  D  +LS RA ++   GKWD A  ++Q A++S  N+VQPFW  Y ++LF+++KSFEA SI+ RVA K+P +SD+H  LA + Y  G+I  AE++W  V+ P+++ +I
Sbjct:  147 LYQQLIQEEPTFAPAYSNLANIQIIFGKYSQAITNYTRALELAPLSNDTWIVYLNRANTWIALRDIEKAMADIEQAAQWKPKDSLILSTRALLFAYEGKWDEAFLEFQNAVESRPNEVQPFWFNYGMLLFEKSKSFEARSIIYRVAQKYPKLSDIHVVLAGIEYAEGNIQTAESQWKLVEHPKIYTHI 334          
BLAST of Gcaud2548.t1 vs. uniprot
Match: A0A5J4Z8P3_PORPP (UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase n=1 Tax=Porphyridium purpureum TaxID=35688 RepID=A0A5J4Z8P3_PORPP)

HSP 1 Score: 154 bits (390), Expect = 3.650e-43
Identity = 83/184 (45.11%), Postives = 111/184 (60.33%), Query Frame = 0
Query:    2 YNRLVREAPTFAPAYSNRANVLVAGGRYSEAERDYDEALKLAPSDGDAWVLYVNRGATRLALGRTEDALGDLNDAYRLRGDDQTVLSNRASVYEVLGKWDNAIRDYQKAL--KSNDVQPFWIRYALVLFQRNKSFEALSILKRVAAKFPDVSDVHAALALVYYDRGDIAAAETEWSAVDRPRLF 183
            Y+ L + +P FA AYSNR NV VA  +Y EA  DY  AL+LAP   D++V+ V                         R D+  V  NRA++     KW +A+ DYQ+A+  K NDV+PFW+ YA+VL+Q NK  EAL ++KRVAAK+  V DV+AAL+++YYD+ D+  AE  W AV RPRLF
Sbjct:   84 YSELAQSSPNFAGAYSNRGNVYVALKKYEEAVADYTRALELAPLASDSYVVLVXXXXXXXXXXXXXXXXXXXXXXXXXRPDESLVYVNRATLLARQQKWTSALNDYQRAVEKKPNDVEPFWLDYAMVLYQINKPGEALGVVKRVAAKYGTVDDVNAALSVMYYDKNDLPDAEGAWGAVARPRLF 267          
BLAST of Gcaud2548.t1 vs. uniprot
Match: D7FQV0_ECTSI (TPR domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FQV0_ECTSI)

HSP 1 Score: 138 bits (347), Expect = 1.620e-35
Identity = 75/183 (40.98%), Postives = 107/183 (58.47%), Query Frame = 0
Query:    1 MYNRLVREAPTFAPAYSNRANVLVAGGRYSEAERDYDEALKLAPSD--GDAWVLYVNRGATRLALGRTEDALGDLNDAYRLR-GDDQTVLSNRASVYEVLGKWDNAIRDYQKAL--KSNDVQPFWIRYALVLFQRNKSFEALSILKRVAAKFPDVSDVHAALALVYYDRGDIAAAETEWSAVD 178
            +YN++V+ AP +   +SNRANVL+A G    A  DYD AL+LA      D W++Y+NR                LN A +L    D   L+NRA  +E  G W  A+ DY+ A+  +  +VQP+WIRY+LVLFQ  + F++L+ LKRV AKF  V +V AA+  + + RGD+ AAE  W  ++
Sbjct:  194 LYNQVVKYAPGYVYGWSNRANVLIAEGDLKAAVSDYDRALQLAEGIYMPDKWIIYLNRXXXXXXXXXXXXXXXXLNQAAKLNTSKDLYTLANRAQAFERRGDWAKALADYEGAINVQPGNVQPWWIRYSLVLFQEGRDFDSLAFLKRVQAKFEGVGEVQAAMTAIEFGRGDMKAAEGAWRGIN 376          
BLAST of Gcaud2548.t1 vs. uniprot
Match: A0A0M0JQK7_9EUKA (Tetratricopeptide repeat protein n=1 Tax=Chrysochromulina tobinii TaxID=1460289 RepID=A0A0M0JQK7_9EUKA)

HSP 1 Score: 135 bits (340), Expect = 7.610e-35
Identity = 74/161 (45.96%), Postives = 99/161 (61.49%), Query Frame = 0
Query:    9 APTFAPAYSNRANVLVAGGRYSEAERDYDEALKLAPSDGDAWVLYVNRGATRLALGRTEDALGDLNDAYRLRGDDQTVLSNRASVYEVLGKWDNAIRDYQKALKSN--DVQPFWIRYALVLFQ-RNKSFEALSILKRVAAKFPDVSDVHAALALVYYDRGD 166
            AP +  AY+NRANV VA G Y  A  DY+ AL+LAP   DAW+ Y+N GAT +A  R  +AL ++  A R+  DD+  L  R + Y  LGKW  A  D+  AL+ N  D+QPFWIRYAL LF+ R +  EAL I++RVAAK+    +   A   + +D G+
Sbjct:  126 APNYYGAYANRANVRVARGNYVGAVADYEAALRLAPLAKDAWITYLNLGATLIAADRAPEALDNMERAVRMSKDDRLALLGRGNAYHALGKWGAAAADHGAALEKNPSDIQPFWIRYALELFEARERRPEALGIIRRVAAKYDLEPEAQLAACSMLWDGGN 286          
BLAST of Gcaud2548.t1 vs. uniprot
Match: A0A7S2SDF4_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2SDF4_9STRA)

HSP 1 Score: 132 bits (331), Expect = 1.410e-34
Identity = 76/192 (39.58%), Postives = 119/192 (61.98%), Query Frame = 0
Query:    1 MYNRLVREAPTFAPAYSNRANVLVAGGRYSEAERDYDEALKLAPSD------GDAWVLYVNRGATRLALGRT-EDALGDLNDAYRLR-GDDQTVLSNRASVYEVLGKWDNAIRDYQKAL--KSNDVQPFWIRYALVLFQRNKSFEALSILKRVAAKFPDVSDVHAALALVYYDRGDIAAAETEWSAVDRPRL 182
            +Y++++   P++  A+SNR N+ V  G    A +DYD+A++L  ++      G+AW++Y+NRG TRLALG   + AL DLN A  +R   D  +L++RA  YE LG W +A  DYQ AL  K NDV+P+W+R++LVLFQ  +  +A+++ +RV +KF   ++V  ALA +  D   +  A   W   D+P +
Sbjct:   49 LYSKIIELEPSYPYAFSNRGNLDVLRGDLRLALQDYDQAVELLSAESSARLNGEAWLVYLNRGTTRLALGDDPKQALVDLNLAAAIRRSPDTLLLTSRAQAYERLGDWASAAADYQAALSLKPNDVEPWWLRFSLVLFQLGRDVDAVALARRVRSKFSGEAEVGIALACMLVDARQLTEATKLW--FDQPSI 238          
BLAST of Gcaud2548.t1 vs. uniprot
Match: A0A7S4ETF5_CHRCT (Hypothetical protein n=1 Tax=Chrysotila carterae TaxID=13221 RepID=A0A7S4ETF5_CHRCT)

HSP 1 Score: 131 bits (329), Expect = 1.150e-33
Identity = 74/149 (49.66%), Postives = 91/149 (61.07%), Query Frame = 0
Query:    2 YNRLVRE-APTFAPAYSNRANVLVAGGRYSEAERDYDEALKLAPSDGDAWVLYVNRGATRLALGRTEDALGDLNDAYRLRGDDQTVLSNRASVYEVLGKWDNAIRDYQKALKSN--DVQPFWIRYALVLFQRNKSFEALSILKRVAAKF 147
            +  LV E AP +A  Y+NRANV VA G    A RDYD AL+L P     WV  +NRGATR ALG TE AL DL +A RL   D+  L  R SV   LG++  A  DY   +     DVQPFW+RYA+ LF+ ++  EAL I++RVA KF
Sbjct:  118 FTLLVEEFAPNYADGYANRANVRVARGDLEGAVRDYDTALQLVPRGNSVWVNLLNRGATRSALGDTELALSDLQEAVRLSQGDKLALLGRGSVLHKLGRYAEAASDYGAVVNKRPLDVQPFWLRYAIDLFEADRRLEALGIVRRVANKF 266          
BLAST of Gcaud2548.t1 vs. uniprot
Match: A0A7S1TIT0_9RHOD (Hypothetical protein n=1 Tax=Compsopogon caeruleus TaxID=31354 RepID=A0A7S1TIT0_9RHOD)

HSP 1 Score: 132 bits (333), Expect = 1.210e-33
Identity = 72/187 (38.50%), Postives = 98/187 (52.41%), Query Frame = 0
Query:    1 MYNRLVREAPTFAPAYSNRANVLVAGGRYSEAERDYDEALKLAPSDGDAWVLYVNRGATRLALGRTEDALGDLNDAYRLRGDDQTVL--SNRASVYEVLGKWDNAIRDYQKALKSNDVQPFWIRYALVLFQRNKSFEALSILKRVAAKFPDVSDVHAALALVYYDRGDIAAAETEWSAVDRPRLFEN 185
            +Y++++  A TFAPAYSNR NV V   RY +A  DY  AL LAP   DAWV+Y                          R  D  VL                            N+V+PFW  YAL+LFQR++SFEA  +L+RVAA++P+  +V AALA V +DR ++A AE+ WS ++RPRL ++
Sbjct:  204 LYSKVIEAATTFAPAYSNRGNVRVVAHRYEDALDDYTRALNLAPVADDAWVIYXXXXXXXXXXXXXXXXXXXXXXXXXXRPGDPLVLVXXXXXXXXXXXXXXXXXXXXXXXXXXXNEVEPFWFSYALILFQRDRSFEAAGLLRRVAARYPNQPEVRAALAAVLFDRNELAEAESNWSVIERPRLVQS 390          
BLAST of Gcaud2548.t1 vs. uniprot
Match: R1ES83_EMIHU (Uncharacterized protein n=3 Tax=Emiliania huxleyi TaxID=2903 RepID=R1ES83_EMIHU)

HSP 1 Score: 121 bits (304), Expect = 6.380e-30
Identity = 73/175 (41.71%), Postives = 102/175 (58.29%), Query Frame = 0
Query:    2 YNRLVRE-APTFAPAYSNRANVLVAGGRYSEAERDYDEALKLAPSDGDAWVLYVNRGATRLALGRTEDALGDLNDAYRLR--GDDQTVLSNRASVYEVLGKWDNAIRDYQKALKS--NDVQPFWIRYALVLFQRNKSFEALSILKRVAAKFPDVSDVHAALALVYYDRGDIAAAE 171
            +N LV + AP+F+  Y+NRANV VA   Y+ A  DY+ AL+L+P   DAWV ++NRG+T +ALG+ E AL DL  +  L     ++  L  R S    LG+W+ A  DY   +    +DVQPFW+RY L L Q  ++ +AL I++RVAAKF    D+     L  Y   + A  E
Sbjct:  122 FNLLVEDLAPSFSGGYANRANVRVALKDYAGAVEDYEMALRLSPLSDDAWVNWLNRGSTLIALGQPERALPDLQRSVELSKAAAEKLSLLGRGSALHALGRWEAAAADYGAVVSKAPSDVQPFWLRYGLELLQVGRTQDALGIVRRVAAKF----DIEPECQLALYAATNAAGGE 292          
The following BLAST results are available for this feature:
BLAST of Gcaud2548.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2V3J951_9FLOR8.100e-9775.68UDP-N-acetylglucosamine--peptide N-acetylglucosami... [more]
R7QMM9_CHOCR7.750e-7663.78TPR repeat-containing protein n=1 Tax=Chondrus cri... [more]
M2X3Y3_GALSU1.640e-5344.68Uncharacterized protein n=1 Tax=Galdieria sulphura... [more]
A0A5J4Z8P3_PORPP3.650e-4345.11UDP-N-acetylglucosamine--peptide N-acetylglucosami... [more]
D7FQV0_ECTSI1.620e-3540.98TPR domain-containing protein n=1 Tax=Ectocarpus s... [more]
A0A0M0JQK7_9EUKA7.610e-3545.96Tetratricopeptide repeat protein n=1 Tax=Chrysochr... [more]
A0A7S2SDF4_9STRA1.410e-3439.58Hypothetical protein n=1 Tax=Rhizochromulina marin... [more]
A0A7S4ETF5_CHRCT1.150e-3349.66Hypothetical protein n=1 Tax=Chrysotila carterae T... [more]
A0A7S1TIT0_9RHOD1.210e-3338.50Hypothetical protein n=1 Tax=Compsopogon caeruleus... [more]
R1ES83_EMIHU6.380e-3041.71Uncharacterized protein n=3 Tax=Emiliania huxleyi ... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR019734Tetratricopeptide repeatSMARTSM00028tpr_5coord: 50..83
e-value: 12.0
score: 14.2
coord: 13..46
e-value: 2.9E-6
score: 36.8
coord: 84..117
e-value: 0.18
score: 20.9
IPR019734Tetratricopeptide repeatPROSITEPS50005TPRcoord: 13..46
score: 10.6794
IPR019734Tetratricopeptide repeatPROSITEPS50005TPRcoord: 84..117
score: 8.2014
NoneNo IPR availablePFAMPF13424TPR_12coord: 13..80
e-value: 6.0E-8
score: 32.9
NoneNo IPR availablePFAMPF13432TPR_16coord: 124..174
e-value: 2.8E-4
score: 21.4
NoneNo IPR availablePANTHERPTHR44858:SF8SUBFAMILY NOT NAMEDcoord: 13..181
NoneNo IPR availablePANTHERPTHR44858TETRATRICOPEPTIDE REPEAT PROTEIN 6coord: 13..181
NoneNo IPR availablePROSITEPS50293TPR_REGIONcoord: 13..46
score: 8.957401
IPR001440Tetratricopeptide repeat 1PFAMPF00515TPR_1coord: 86..112
e-value: 1.5E-6
score: 27.8
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10Tetratricopeptide repeat domaincoord: 1..53
e-value: 1.4E-10
score: 43.0
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10Tetratricopeptide repeat domaincoord: 54..179
e-value: 5.0E-24
score: 86.9
IPR011990Tetratricopeptide-like helical domain superfamilySUPERFAMILY48452TPR-likecoord: 2..175

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NODE_146_length_43567_cov_5.009154contigNODE_146_length_43567_cov_5.009154:34928..35688 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria caudata M_176_S67 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gcaud2548.t1Gcaud2548.t1Gracilaria caudata M_176_S67 malemRNANODE_146_length_43567_cov_5.009154 34928..35688 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gcaud2548.t1 ID=Gcaud2548.t1|Name=Gcaud2548.t1|organism=Gracilaria caudata M_176_S67 male|type=polypeptide|length=188bp
MYNRLVREAPTFAPAYSNRANVLVAGGRYSEAERDYDEALKLAPSDGDAW
VLYVNRGATRLALGRTEDALGDLNDAYRLRGDDQTVLSNRASVYEVLGKW
DNAIRDYQKALKSNDVQPFWIRYALVLFQRNKSFEALSILKRVAAKFPDV
SDVHAALALVYYDRGDIAAAETEWSAVDRPRLFENIQ*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR019734TPR_repeat
IPR001440TPR_1
IPR011990TPR-like_helical_dom_sf