Gcaud8084.t1 (polypeptide) Gracilaria caudata M_176_S67 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGcaud8084.t1
Unique NameGcaud8084.t1
Typepolypeptide
OrganismGracilaria caudata M_176_S67 male (Gracilaria caudata M_176_S67 male)
Sequence length223
Homology
BLAST of Gcaud8084.t1 vs. uniprot
Match: A0A2V3IMY7_9FLOR (Peptidyl-prolyl cis-trans isomerase B n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IMY7_9FLOR)

HSP 1 Score: 311 bits (796), Expect = 3.920e-104
Identity = 154/196 (78.57%), Postives = 174/196 (88.78%), Query Frame = 0
Query:   27 SDRAFFDISVAGRPVGRIVIQLFADAAPVSVDTFKKLVEGTLRNRSGRTAGYKYAQASRVISGKRVELGRVKQIDTLNQQSGVPQRQIVTVQVPENRDSNQLLHDSKGLVSVQRGGSFEFSVMLAPDSELDDSHLVIGRVVDGMNVVDVLGKVPTNRKTIRDGYRNIGKAIGDARAKVDLEDKPLQKIQITNCGLL 222
            +DR FFD++VAGRPVGR+ I LFAD APVSV TFK+L +GTLRNR+GRT GYKYAQA+RV++GKRV+LGRVKQID LNQQ GVPQRQIVTVQ PENRDSN L H ++GLVSV+RGG+FEFSV+LAPD  LD + +VIG VVDG +VVDVL  VPTNR+TIRDGYRNIGKAIGDARA VDLEDKPLQKIQITNCGLL
Sbjct:   88 TDRVFFDLAVAGRPVGRVTIALFADEAPVSVHTFKQLAQGTLRNRAGRTVGYKYAQAARVVAGKRVDLGRVKQIDALNQQPGVPQRQIVTVQPPENRDSNNLSHQNRGLVSVRRGGAFEFSVLLAPDPSLDHTSIVIGTVVDGFDVVDVLANVPTNRRTIRDGYRNIGKAIGDARANVDLEDKPLQKIQITNCGLL 283          
BLAST of Gcaud8084.t1 vs. uniprot
Match: A0A7J7IPQ7_9RHOD (PPIase cyclophilin-type domain-containing protein n=1 Tax=Cyanidiococcus yangmingshanensis TaxID=2690220 RepID=A0A7J7IPQ7_9RHOD)

HSP 1 Score: 136 bits (342), Expect = 2.780e-35
Identity = 87/209 (41.63%), Postives = 125/209 (59.81%), Query Frame = 0
Query:   27 SDRAFFDISVAG--RPVGR-IVIQLFADAAPVSVDTFKKLVEGTLRNRSGRTAGYKYAQASRVISGKRVELGRVKQIDTLNQQSGVPQRQIVTVQVPENRDSNQLLHDSKGLVSV--QRGGSFEFSVM---LAPDS-----ELDDSHLVIGRVVDGMNVVDVLGKVPTNRKTIRDGYRNIGKAIGDARAKVDLEDKPLQKIQITNCGLL 222
            +DRA F I V G   P+   I++ L+ + AP +V+ FK+LVE  L +  GRT GY Y  ASR+I  +R+ELGRV Q + L Q  GVP R  + +  P  RD N L H   G +S+  + G  FEF ++   +  D      ELD  ++VIGRV++GM  V +L  +P NR T RD  R++G+A+GD RA+ D   +PL+K++I  C +L
Sbjct:  108 TDRARFVIQVGGPNEPLPPPIILGLYGEEAPQAVEQFKQLVEQRL-SVGGRTLGYAYTTASRIIPDQRIELGRVLQSEDLVQLGGVPSRPRMLLS-PGTRDRNALRHRCAGTISIPHEPGRGFEFCILPIDVVDDQAVFVKELDADNIVIGRVIEGMETVRLLNAIPVNRPTPRDVLRHVGQALGDVRARQDPTWRPLRKVRILECNVL 314          
BLAST of Gcaud8084.t1 vs. uniprot
Match: A0A0G4FLE6_VITBC (Peptidyl-prolyl cis-trans isomerase n=1 Tax=Vitrella brassicaformis (strain CCMP3155) TaxID=1169540 RepID=A0A0G4FLE6_VITBC)

HSP 1 Score: 105 bits (262), Expect = 2.470e-24
Identity = 74/207 (35.75%), Postives = 115/207 (55.56%), Query Frame = 0
Query:   27 SDRAFFDISVAGRPVGRIVIQLFADAAPVSVDTFKKLVEGTLRNRSGRTAGYKYAQASRVISGKRVELGRV-----KQIDTLNQQSG---VPQRQIVTVQVPENRDSNQLLHDSKGLVSVQRGG-SFEFSVMLAPDSELDDSHLVIGRVVDGMNVVDVLGKVP-TNRKTIRDGYRNIGKAIGDARAKVDLED-KPLQKIQITNCGLL 222
            SDR + D+ + G+ +GR+V+ L+ + AP SV TF +L   T          Y Y+  S+V   + V LG++     K++D    ++G   V      T +   N DS    H S+GLVSV+RGG +FEF V L P  +LD  ++VIG+V++GM+V+  L +V     + +R+ +R++ KAIGD RA    +   P+ K+   N GLL
Sbjct:   27 SDRCYLDMELNGKLLGRVVVGLWGEEAPTSVQTFAQLCGKTYPGG----LSYAYSAMSKVFPNQLVVLGKITGDGTKKVDKKIDETGRVRVTYTDRATYETA-NTDSPSTSHSSEGLVSVRRGGGTFEFGVTLQPMPDLDRDYIVIGQVLEGMDVIKRLSRVKYIPPEDLREAFRSVAKAIGDPRASGGGDAYSPVAKVITKNVGLL 228          
BLAST of Gcaud8084.t1 vs. uniprot
Match: A0A7S0TFK2_HEMAN (Hypothetical protein (Fragment) n=1 Tax=Hemiselmis andersenii TaxID=464988 RepID=A0A7S0TFK2_HEMAN)

HSP 1 Score: 105 bits (263), Expect = 1.310e-23
Identity = 66/206 (32.04%), Postives = 104/206 (50.49%), Query Frame = 0
Query:   41 VGRIVIQLFADAAPVSVDTFKKLVEGTL---------------------------------RNRSGRTAGYKYAQASRVISGKRVELGRVKQIDTLNQQSGVPQRQIVTVQVPENRDSNQLLHDSKGLVSVQRGG-SFEFSVMLAPDSELDDSHLVIGRVVDGMNVVDVLGKVPTNRKTIRDG-YRNIGKAIGDARAKVDLEDKPL 211
            VGRIVI L+   AP SV T  KLV+G L                                 + + G    Y+Y+Q   VI GKR+++GR+ ++                +  P+N DSN L HDS+G+VSV++GG +FEF++   P+ ELD ++ V+GRV++G  +V+VL   P ++    +G ++     IGD R +   +++PL
Sbjct:  142 VGRIVIGLYGKEAPESVGTILKLVKGELPAECIDEDEAYDEEAFGQSDRDRLTKRQIYKQCKAKEGTNLSYQYSQVGTVIKGKRIDVGRMNKL---------------YLAAPQNEDSNSLKHDSEGVVSVRKGGGAFEFTIAPGPNPELDKTNTVVGRVLEGAEMVEVLNDAPVSQGQFLEGAFKFTANVIGDVRGRSTAQNRPL 332          
BLAST of Gcaud8084.t1 vs. uniprot
Match: A0A7S0JAW9_9EUKA (Hypothetical protein n=1 Tax=Calcidiscus leptoporus TaxID=127549 RepID=A0A7S0JAW9_9EUKA)

HSP 1 Score: 102 bits (254), Expect = 6.630e-23
Identity = 73/201 (36.32%), Postives = 110/201 (54.73%), Query Frame = 0
Query:   44 IVIQLFADAAPVSVDTFKKLVEGTLRNRSGRTAGYKYAQASRVISGKRVELGRV-----KQIDTLNQQSGVPQRQIVTVQVP-ENRDSNQLLHDSKGLVSVQRGG-SFEFSVMLAPDSELDDSHLVIGRVVDGMNVVDVLGKVPTNRKTIRDG----------------YRNIGKAIGDARAKVDLEDKPLQKIQITNCGL 221
            +V+ L+ + AP SV TF+ L  G+L      T  Y  + ASRV  GK + LG++     + I+     +G  + ++V +     N DSN L HD  GL++V RGG +FEF +  AP+  LDD  LVIG VV G++VV++L +VP  R+  +D                 Y  + KA GD R+++D   +PLQKI+I+ C +
Sbjct:   56 VVLGLYGEDAPASVATFQGLCSGSLPGFP--TLTYLGSTASRVEKGKLIVLGKLTAGQAQDIERTLDNTGYVRNKLVNLAERFTNTDSNALTHDRAGLLTVVRGGGAFEFGLTPAPNMALDDQRLVIGEVVRGLDVVELLNQVPA-RQPSKDNEVGRVIYALGAYDETKYLAVAKAGGDPRSRIDQTYRPLQKIRISYCAV 253          
BLAST of Gcaud8084.t1 vs. uniprot
Match: A0A7S0BF98_9RHOD (Hypothetical protein n=1 Tax=Rhodosorus marinus TaxID=101924 RepID=A0A7S0BF98_9RHOD)

HSP 1 Score: 94.4 bits (233), Expect = 1.170e-20
Identity = 70/167 (41.92%), Postives = 96/167 (57.49%), Query Frame = 0
Query:   75 TAGYKYA--QASRVISGKRVELGR---------VKQIDTLNQQSGVPQRQIVTV--QVPENRDSNQLLHDSKGLVS-VQRGGSFEFSVMLAP--DSELDDSHLVIGRVVDGMNVVDVLGKVPTNRKT-IRDGYRNIGKAIGDARAKVDLED--KPLQKIQITNCGLL 222
            T+G  YA  Q  +V   KR++LGR         V+ ID     SG  +R+ V+      EN D N L H++ GLVS V+ GGSFEF +  +P  D  LDD H+VIG+VVDGM+V+  L  +  N+ T  ++ + ++GKAI D RA    +D  KPLQK  I  CG+L
Sbjct:    7 TSGLSYASSQVFKVEKDKRIDLGRLAKGAGKTEVRSIDY----SGYVRRKYVSTADSTTENVDGNSLRHNAAGLVSMVKGGGSFEFVITPSPTPDRTLDDDHVVIGQVVDGMDVIARLNNLAVNKPTSYKNTFISMGKAINDKRATAAEDDNFKPLQKTVIKYCGIL 169          
BLAST of Gcaud8084.t1 vs. uniprot
Match: UPI001E8E68AD (putative peptidyl-prolyl cis-trans isomerase n=1 Tax=Talaromyces proteolyticus TaxID=1131652 RepID=UPI001E8E68AD)

HSP 1 Score: 86.3 bits (212), Expect = 1.790e-17
Identity = 66/209 (31.58%), Postives = 97/209 (46.41%), Query Frame = 0
Query:   24 MADSDR-------AFFDISVAGRPVGRIVIQLFADAAPVSVDTFKKLVEGTLRNRSGRTAGYKYAQASRVISGKRVELGRVKQIDTLNQQSGVPQRQIVTVQVPENRDSN-QLLHDSKGLVSVQRGG----SFEFSVMLAPDSELDDSHLVIGRVVDGMNVVDVLGKVPTNRKTIRDGYRNIGKAIGDARAKVDLEDKPLQKIQITNCG 220
            MAD+ R        FFDI++AG P+GR+ ++LFAD  P + + F++   G  +N +GR  GYK  +  RVI    ++ G     D +N   G     I   Q  +  D N  L HD  GL+S+   G      +F +   P   L++ H+V G+V+DGMN+V ++    T R                        DKP Q + IT CG
Sbjct:    1 MADNSRQSESNPVVFFDIALAGEPLGRVKMELFADITPRTAENFRQFCTGETKNSTGRPQGYKGCKFHRVIKEFMIQGG-----DFING-DGTGSASIYGGQ--KFSDENFTLKHDRAGLLSMANSGPNTNGCQFFITTVPAPFLNNKHVVFGQVIDGMNIVRMIENTRTTR------------------------DKPNQDVTITQCG 177          
BLAST of Gcaud8084.t1 vs. uniprot
Match: A0A1V8SK59_9PEZI (Peptidyl-prolyl cis-trans isomerase n=3 Tax=Rachicladosporium TaxID=470018 RepID=A0A1V8SK59_9PEZI)

HSP 1 Score: 85.5 bits (210), Expect = 3.050e-17
Identity = 61/200 (30.50%), Postives = 93/200 (46.50%), Query Frame = 0
Query:   26 DSDRAFFDISVAGRPVGRIVIQLFADAAPVSVDTFKKLVEGTLRNRSGRTAGYKYAQASRVISGKRVELGRVKQIDTLNQQSGVPQRQIVTVQVPENRDSN-QLLHDSKGLVSVQRGGS----FEFSVMLAPDSELDDSHLVIGRVVDGMNVVDVLGKVPTNRKTIRDGYRNIGKAIGDARAKVDLEDKPLQKIQITNCG 220
            D+   FFD ++ G P+GRI IQLFADA P + + F++   G  +N  GR  GYK  +  RVI    ++ G     D +N   G          V +  D N +  H+  GL+S+   G      +F ++ AP   L+  H+V G+V+DGM+VV  +  V T                         ++KP+Q + I+ CG
Sbjct:    4 DNPIVFFDTALGGEPLGRIKIQLFADAVPRTAENFRQFCTGETKNHLGRPIGYKGCKFHRVIKDFMIQGG-----DFIN---GDGTGSATIYGVNKFPDENFKYRHEEAGLLSMANSGKDTNGCQFFILTAPAPHLNGKHVVFGKVIDGMDVVRKIENVRTR------------------------DEKPVQDVAISQCG 171          
BLAST of Gcaud8084.t1 vs. uniprot
Match: A0A6J1C7M4_MOMCH (peptidyl-prolyl cis-trans isomerase CYP26-2, chloroplastic n=1 Tax=Momordica charantia TaxID=3673 RepID=A0A6J1C7M4_MOMCH)

HSP 1 Score: 88.6 bits (218), Expect = 3.250e-17
Identity = 73/228 (32.02%), Postives = 105/228 (46.05%), Query Frame = 0
Query:   23 GMADSDRAFFDISVAGRPVGRIVIQLFADAAPVSVDTFKKLVEG----TLRNRSGRTAGYKYAQASRVIS-GKRVELGR-----------VKQIDTLNQQSGVPQRQIVTVQV----PENRDSNQLLHDSKGLVSVQRG------GSFEFSVMLAPDSELDDSHLVIGRVVDGMNVVDVLGKVPTNRKTIRDGYRNIGKAIGDARAKVDLE--DKPLQKIQITNCGLL 222
            G + + RAF DIS+ G P GRI+I L+ D AP  V  F  LV G    + R +        Y Q S V S G  VEL +             + + +N++    +    TV +    P        L   +G + V +          EF++ +    ELDDS LVIG V++GM VVD + +V T +      Y  + K IGD RA V     ++P  K+ +TNCGL+
Sbjct:  101 GQSPTKRAFLDISIDGEPAGRIIIGLYGDDAPAGVARFGNLVSGAAGVSYRRKDFVKITSNYVQHSGVRSYGVDVELAKRTGNELASETLKDEWERVNEKCSGTKNMAGTVGIIVRDPSKPPPKLKLVARQGKLEVDQEEVGMEPNGTEFTISVKDSPELDDSALVIGTVLEGMQVVDRIAQVKTVKDNTTSPYFRVAKLIGDKRAVVAERGFNRPYSKVIVTNCGLI 328          
BLAST of Gcaud8084.t1 vs. uniprot
Match: A0A1V8SNE4_9PEZI (Peptidyl-prolyl cis-trans isomerase n=2 Tax=Rachicladosporium TaxID=470018 RepID=A0A1V8SNE4_9PEZI)

HSP 1 Score: 86.3 bits (212), Expect = 1.050e-16
Identity = 62/200 (31.00%), Postives = 93/200 (46.50%), Query Frame = 0
Query:   26 DSDRAFFDISVAGRPVGRIVIQLFADAAPVSVDTFKKLVEGTLRNRSGRTAGYKYAQASRVISGKRVELGRVKQIDTLNQQSGVPQRQIVTVQVPENRDSN-QLLHDSKGLVSVQRGGS----FEFSVMLAPDSELDDSHLVIGRVVDGMNVVDVLGKVPTNRKTIRDGYRNIGKAIGDARAKVDLEDKPLQKIQITNCG 220
            D+   FFD ++ G P+GRI IQLFADA P +V+ F++   G  +N  GR  GYK  +  RVI    ++ G     D +N   G          V +  D N +  H   GL+S+   G      +F ++ AP   L+  H+V G+V+DGM+VV  +  V T                         ++KP+Q + I+ CG
Sbjct:    5 DNPIVFFDTALGGEPLGRIKIQLFADAVPRTVENFRQFCTGETKNHLGRPIGYKGCKFHRVIKDFMIQGG-----DFIN---GDGTGSATIYGVNKFADENFKYRHGEAGLLSMANSGKDTNGCQFFILTAPAPHLNGKHVVFGKVIDGMDVVRKIENVRTR------------------------DEKPVQDVAISQCG 172          
The following BLAST results are available for this feature:
BLAST of Gcaud8084.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2V3IMY7_9FLOR3.920e-10478.57Peptidyl-prolyl cis-trans isomerase B n=1 Tax=Grac... [more]
A0A7J7IPQ7_9RHOD2.780e-3541.63PPIase cyclophilin-type domain-containing protein ... [more]
A0A0G4FLE6_VITBC2.470e-2435.75Peptidyl-prolyl cis-trans isomerase n=1 Tax=Vitrel... [more]
A0A7S0TFK2_HEMAN1.310e-2332.04Hypothetical protein (Fragment) n=1 Tax=Hemiselmis... [more]
A0A7S0JAW9_9EUKA6.630e-2336.32Hypothetical protein n=1 Tax=Calcidiscus leptoporu... [more]
A0A7S0BF98_9RHOD1.170e-2041.92Hypothetical protein n=1 Tax=Rhodosorus marinus Ta... [more]
UPI001E8E68AD1.790e-1731.58putative peptidyl-prolyl cis-trans isomerase n=1 T... [more]
A0A1V8SK59_9PEZI3.050e-1730.50Peptidyl-prolyl cis-trans isomerase n=3 Tax=Rachic... [more]
A0A6J1C7M4_MOMCH3.250e-1732.02peptidyl-prolyl cis-trans isomerase CYP26-2, chlor... [more]
A0A1V8SNE4_9PEZI1.050e-1631.00Peptidyl-prolyl cis-trans isomerase n=2 Tax=Rachic... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002130Cyclophilin-type peptidyl-prolyl cis-trans isomerase domainPRINTSPR00153CSAPPISMRASEcoord: 145..157
score: 28.5
coord: 158..173
score: 46.66
coord: 48..63
score: 37.21
IPR002130Cyclophilin-type peptidyl-prolyl cis-trans isomerase domainPFAMPF00160Pro_isomerasecoord: 33..184
e-value: 5.7E-19
score: 68.9
IPR002130Cyclophilin-type peptidyl-prolyl cis-trans isomerase domainPROSITEPS50072CSA_PPIASE_2coord: 31..221
score: 19.87459
IPR029000Cyclophilin-like domain superfamilyGENE3D2.40.100.10coord: 23..221
e-value: 1.2E-30
score: 108.7
IPR029000Cyclophilin-like domain superfamilySUPERFAMILY50891Cyclophilin-likecoord: 28..222
IPR044185Peptidyl-prolyl cis-trans isomerase CYP26-2-likePANTHERPTHR47724PEPTIDYL-PROLYL CIS-TRANS ISOMERASE CYP26-2, CHLOROPLASTICcoord: 143..222
coord: 20..67
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..16
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 2..9
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..1
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 10..16
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 17..222

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NODE_1375_length_11068_cov_4.224287contigNODE_1375_length_11068_cov_4.224287:8359..9260 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria caudata M_176_S67 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gcaud8084.t1Gcaud8084.t1Gracilaria caudata M_176_S67 malemRNANODE_1375_length_11068_cov_4.224287 8359..9260 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gcaud8084.t1 ID=Gcaud8084.t1|Name=Gcaud8084.t1|organism=Gracilaria caudata M_176_S67 male|type=polypeptide|length=223bp
MLLLSVAIPSSARVQAAPDVGAGMADSDRAFFDISVAGRPVGRIVIQLFA
DAAPVSVDTFKKLVEGTLRNRSGRTAGYKYAQASRVISGKRVELGRVKQI
DTLNQQSGVPQRQIVTVQVPENRDSNQLLHDSKGLVSVQRGGSFEFSVML
APDSELDDSHLVIGRVVDGMNVVDVLGKVPTNRKTIRDGYRNIGKAIGDA
RAKVDLEDKPLQKIQITNCGLL*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR002130Cyclophilin-type_PPIase_dom
IPR029000Cyclophilin-like_dom_sf
IPR044185CYP26-2-like